CuGenDBv2

Gene ID	Carg20537
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	methyl-CpG-binding domain-containing protein 8-like isoform X2
Genome location	Carg_Chr12:855303..855956
RNA-Seq Expression	Carg20537
Synteny	Carg20537
Gene Ontology terms	NA
InterPro domains	IPR037472 - Methyl-CpG-binding domain-containing protein 8

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022952017.1 methyl-CpG-binding domain-containing protein 8-like isoform X1 [Cucurbita moschata]

4.2e-110

100

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Query:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
        MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
Subjt:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP

Query:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
        QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
Subjt:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI

Query:  SGCDKRAEEDEIVM
        SGCDKRAEEDEIVM
Subjt:  SGCDKRAEEDEIVM

XP_022952018.1 methyl-CpG-binding domain-containing protein 8-like isoform X2 [Cucurbita moschata]

1.3e-111

100

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Query:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
        MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
Subjt:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP

Query:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
        QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
Subjt:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI

Query:  SGCDKRAEEDEIVMVML
        SGCDKRAEEDEIVMVML
Subjt:  SGCDKRAEEDEIVMVML

XP_023002676.1 methyl-CpG-binding domain-containing protein 8-like isoform X1 [Cucurbita maxima]

9.3e-110

99.53

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Query:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
        MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSS+SQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
Subjt:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP

Query:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
        QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
Subjt:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI

Query:  SGCDKRAEEDEIVM
        SGCDKRAEEDEIVM
Subjt:  SGCDKRAEEDEIVM

XP_023002677.1 methyl-CpG-binding domain-containing protein 8-like isoform X2 [Cucurbita maxima]

2.9e-111

99.54

Show/hide

Query:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
        MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSS+SQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
Subjt:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP

Query:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
        QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
Subjt:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI

Query:  SGCDKRAEEDEIVMVML
        SGCDKRAEEDEIVMVML
Subjt:  SGCDKRAEEDEIVMVML

XP_023538586.1 methyl-CpG-binding domain-containing protein 8-like isoform X1 [Cucurbita pepo subsp. pepo]

4.2e-110

100

Show/hide

Query:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
        MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
Subjt:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP

Query:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
        QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
Subjt:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI

Query:  SGCDKRAEEDEIVM
        SGCDKRAEEDEIVM
Subjt:  SGCDKRAEEDEIVM

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BS27 methyl-CpG-binding domain-containing protein 8 isoform X2

6.9e-95

87.1

Show/hide

Query:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
        MASTTMVASPS++ FRMNTLPIIDLRLLSQSELYCLSRFSSSSSS+ SQSN+DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSS IRP
Subjt:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP

Query:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
        QSP+R D ESA+I+TLFKQLFVG+SHC V++SY D DEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKDSNRF QSNGNA  NS 
Subjt:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI

Query:  SGCDKRAEEDEIVMVML
        SGC+KRAEE+EIVMVML
Subjt:  SGCDKRAEEDEIVMVML

A0A6J1GJ84 methyl-CpG-binding domain-containing protein 8-like isoform X1

2.0e-110

100

Show/hide

Query:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
        MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
Subjt:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP

Query:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
        QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
Subjt:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI

Query:  SGCDKRAEEDEIVM
        SGCDKRAEEDEIVM
Subjt:  SGCDKRAEEDEIVM

A0A6J1GJB3 methyl-CpG-binding domain-containing protein 8-like isoform X2

6.3e-112

100

Show/hide

Query:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
        MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
Subjt:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP

Query:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
        QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
Subjt:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI

Query:  SGCDKRAEEDEIVMVML
        SGCDKRAEEDEIVMVML
Subjt:  SGCDKRAEEDEIVMVML

A0A6J1KK67 methyl-CpG-binding domain-containing protein 8-like isoform X2

1.4e-111

99.54

Show/hide

Query:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
        MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSS+SQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
Subjt:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP

Query:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
        QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
Subjt:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI

Query:  SGCDKRAEEDEIVMVML
        SGCDKRAEEDEIVMVML
Subjt:  SGCDKRAEEDEIVMVML

A0A6J1KLZ0 methyl-CpG-binding domain-containing protein 8-like isoform X1

4.5e-110

99.53

Show/hide

Query:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
        MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSS+SQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP
Subjt:  MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRP

Query:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
        QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI
Subjt:  QSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSI

Query:  SGCDKRAEEDEIVM
        SGCDKRAEEDEIVM
Subjt:  SGCDKRAEEDEIVM

SwissProt top hits

e value

%identity

Alignment

Q9LME6 Methyl-CpG-binding domain-containing protein 8

1.0e-18

43.17

Show/hide

Query:  DRFRMNTLPIIDLRLLSQSELYCLSRFSS---SSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEE
        +R    +LP+ID RLLSQSEL  LS+ SS   SSS+S++ S   DD L PKIDRSVFNESAGSRKQT+ RLRLA R  Q P    S   + Q  D   EE
Subjt:  DRFRMNTLPIIDLRLLSQSELYCLSRFSS---SSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEE

Query:  SAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIID------SSYAPIKRRRGRPRKDSN
          ++ +L + LF  +S+    +  D+G+E+L       +  +  +SY ++    +D I       +S   IKR+RGRPRK  N
Subjt:  SAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIID------SSYAPIKRRRGRPRKDSN

Arabidopsis top hits

e value

%identity

Alignment

AT1G22310.2 methyl-CPG-binding domain 8

7.2e-20

43.17

Show/hide

Query:  DRFRMNTLPIIDLRLLSQSELYCLSRFSS---SSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEE
        +R    +LP+ID RLLSQSEL  LS+ SS   SSS+S++ S   DD L PKIDRSVFNESAGSRKQT+ RLRLA R  Q P    S   + Q  D   EE
Subjt:  DRFRMNTLPIIDLRLLSQSELYCLSRFSS---SSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEE

Query:  SAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIID------SSYAPIKRRRGRPRKDSN
          ++ +L + LF  +S+    +  D+G+E+L       +  +  +SY ++    +D I       +S   IKR+RGRPRK  N
Subjt:  SAEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIID------SSYAPIKRRRGRPRKDSN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCCACAACTATGGTTGCTTCCCCCTCCGACGACAGATTCCGCATGAATACTCTCCCGATCATAGATCTCCGTCTCCTCTCCCAATCCGAACTCTATTGTCTCTC
TCGTTTCTCCTCCTCATCGTCGTCTTCAATCTCCCAATCCAACAACGACGACGACGTTCTAATCCCCAAAATTGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGGA
AACAAACCTATTCTCGTCTTCGTCTTGCCCCTCGCAAATCTCAGTTTCCTTCCTCATCCTCCTCCTCCACAATTCGCCCCCAATCCCCTGACCGCTTCGATGAAGAGAGC
GCTGAGATTGTTACTCTCTTCAAGCAGCTCTTCGTTGGAGAGTCTCATTGTGGCGTCAATGACAGCTATGATGATGGAGATGAGGACCTGGTTCTTGTTAACCACATTTA
TGATGAATCGGTACCTGAATCTTCCTACGCGATTTTTCACAGTATTCCTGTTGATATCATCGATAGCAGTTACGCTCCGATTAAGCGGCGGCGAGGACGACCGCGGAAGG
ATAGTAATCGGTTTGCTCAGAGCAATGGAAATGCGGCTGCGAACTCCATAAGCGGATGCGATAAACGAGCGGAGGAGGATGAGATCGTAATGGTAATGCTGTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MASTTMVASPSDDRFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEES
AEIVTLFKQLFVGESHCGVNDSYDDGDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAANSISGCDKRAEEDEIVMVML

Carg20537 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome