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Carg20557 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20557
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:726478..732006
RNA-Seq ExpressionCarg20557
SyntenyCarg20557
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585278.1 hypothetical protein SDJN03_18011, partial [Cucurbita argyrosperma subsp. sororia]2.9e-4275.57Show/hide
Query:  MTSEFKDVPDLCRRLAEKEMETVRKLESALLGNFCRVIVLNGRSLQNCEFAVRLHLIQMKDKYISREMANDKKCRRYLIFRSCLRIHLFLDRIQLSEIYG
        MTSEFKDVPDLCRRLAEKEMETVRKLESALLGNFCRVIVLNGRSLQNCEFAVRLHLIQMKDKYISREMANDKK         C+  +LF +R+  + I  
Subjt:  MTSEFKDVPDLCRRLAEKEMETVRKLESALLGNFCRVIVLNGRSLQNCEFAVRLHLIQMKDKYISREMANDKKCRRYLIFRSCLRIHLFLDRIQLSEIYG

Query:  IAGGIKFRLSMAMHEIPARDKKHEMQLQLTK
               + S+AMHEIPARDKKHEMQLQLTK
Subjt:  IAGGIKFRLSMAMHEIPARDKKHEMQLQLTK
KAG7020197.1 hypothetical protein SDJN02_16880, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-66100Show/hide
Query:  MTSEFKDVPDLCRRLAEKEMETVRKLESALLGNFCRVIVLNGRSLQNCEFAVRLHLIQMKDKYISREMANDKKCRRYLIFRSCLRIHLFLDRIQLSEIYG
        MTSEFKDVPDLCRRLAEKEMETVRKLESALLGNFCRVIVLNGRSLQNCEFAVRLHLIQMKDKYISREMANDKKCRRYLIFRSCLRIHLFLDRIQLSEIYG
Subjt:  MTSEFKDVPDLCRRLAEKEMETVRKLESALLGNFCRVIVLNGRSLQNCEFAVRLHLIQMKDKYISREMANDKKCRRYLIFRSCLRIHLFLDRIQLSEIYG

Query:  IAGGIKFRLSMAMHEIPARDKKHEMQLQLTK
        IAGGIKFRLSMAMHEIPARDKKHEMQLQLTK
Subjt:  IAGGIKFRLSMAMHEIPARDKKHEMQLQLTK
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTCGGAATTTAAGGATGTACCTGATCTATGTAGAAGATTGGCAGAGAAGGAGATGGAGACAGTGAGGAAACTTGAATCTGCACTGCTCGGAAACTTTTGCCGCGT
TATCGTTCTAAATGGGCGCTCTTTACAGAACTGTGAGTTTGCTGTTAGGCTGCATTTGATTCAGATGAAGGATAAGTATATTAGCCGCGAAATGGCAAATGATAAGAAAT
GTAGGCGATACCTGATTTTCCGTAGCTGTTTGAGGATTCATTTGTTCTTAGACAGGATACAGCTTAGCGAAATCTATGGTATTGCTGGTGGTATAAAGTTCAGGCTGAGT
ATGGCTATGCATGAGATTCCTGCAAGAGACAAAAAGCATGAGATGCAGTTGCAACTTACAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCTCGGAATTTAAGGATGTACCTGATCTATGTAGAAGATTGGCAGAGAAGGAGATGGAGACAGTGAGGAAACTTGAATCTGCACTGCTCGGAAACTTTTGCCGCGT
TATCGTTCTAAATGGGCGCTCTTTACAGAACTGTGAGTTTGCTGTTAGGCTGCATTTGATTCAGATGAAGGATAAGTATATTAGCCGCGAAATGGCAAATGATAAGAAAT
GTAGGCGATACCTGATTTTCCGTAGCTGTTTGAGGATTCATTTGTTCTTAGACAGGATACAGCTTAGCGAAATCTATGGTATTGCTGGTGGTATAAAGTTCAGGCTGAGT
ATGGCTATGCATGAGATTCCTGCAAGAGACAAAAAGCATGAGATGCAGTTGCAACTTACAAAGTGA
Protein sequenceShow/hide protein sequence
MTSEFKDVPDLCRRLAEKEMETVRKLESALLGNFCRVIVLNGRSLQNCEFAVRLHLIQMKDKYISREMANDKKCRRYLIFRSCLRIHLFLDRIQLSEIYGIAGGIKFRLS
MAMHEIPARDKKHEMQLQLTK