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Carg20562 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20562
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionnudix hydrolase 16, mitochondrial-like
Genome locationCarg_Chr12:648849..651460
RNA-Seq ExpressionCarg20562
SyntenyCarg20562
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020192.1 Nudix hydrolase 16, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-51100Show/hide
Query:  MSDLVARTGRQQQRYDAGCRLIAGKTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES
        MSDLVARTGRQQQRYDAGCRLIAGKTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES
Subjt:  MSDLVARTGRQQQRYDAGCRLIAGKTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES

XP_022951081.1 nudix hydrolase 16, mitochondrial-like isoform X1 [Cucurbita moschata]3.6e-37100Show/hide
Query:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES
        KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES
Subjt:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES

XP_022951082.1 nudix hydrolase 16, mitochondrial-like isoform X2 [Cucurbita moschata]3.2e-4156.32Show/hide
Query:  MSDLVARTGRQQQRYDAGCRLIAG----------------------------------------------------------------------------
        MSDLVARTGRQQQRYDAGCRLIAG                                                                            
Subjt:  MSDLVARTGRQQQRYDAGCRLIAG----------------------------------------------------------------------------

Query:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES
        KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES
Subjt:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES

XP_023537746.1 nudix hydrolase 16, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo]3.6e-37100Show/hide
Query:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES
        KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES
Subjt:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES

XP_038886652.1 nudix hydrolase 16, mitochondrial isoform X2 [Benincasa hispida]1.6e-3752.6Show/hide
Query:  MSDLVARTGRQQQRYDAGCRLIAG----------------------------------------------------------------------------
        MSDLVARTGR QQRYDAGCRLIAG                                                                            
Subjt:  MSDLVARTGRQQQRYDAGCRLIAG----------------------------------------------------------------------------

Query:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDE
        KTQQDEFSP+GLCRAAMYALFVNEELE WPEQNTRNRSWVTIPEAIE CRHAWMRDALVIGFNKWHA++MNDE
Subjt:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDE

TrEMBL top hitse value%identityAlignment
A0A6J1BSN1 nudix hydrolase 16, mitochondrial isoform X13.0e-3751.76Show/hide
Query:  MSDLVARTGRQQQRYDAGCRLIAG-------------------------------------------------------------------------KTQ
        MSDLVARTGR QQRYDAGCRLIAG                                                                         KTQ
Subjt:  MSDLVARTGRQQQRYDAGCRLIAG-------------------------------------------------------------------------KTQ

Query:  QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDE
        QDEFSP+GLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEA+E CRHAWM DALV+GFNKWHA++M+DE
Subjt:  QDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDE

A0A6J1GGJ9 nudix hydrolase 16, mitochondrial-like isoform X11.7e-37100Show/hide
Query:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES
        KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES
Subjt:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES

A0A6J1GGN9 nudix hydrolase 16, mitochondrial-like isoform X21.5e-4156.32Show/hide
Query:  MSDLVARTGRQQQRYDAGCRLIAG----------------------------------------------------------------------------
        MSDLVARTGRQQQRYDAGCRLIAG                                                                            
Subjt:  MSDLVARTGRQQQRYDAGCRLIAG----------------------------------------------------------------------------

Query:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES
        KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES
Subjt:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES

A0A6J1HB74 nudix hydrolase 16, mitochondrial-like isoform X16.6e-3751.45Show/hide
Query:  MSDLVARTGRQQQRYDAGCRLIAG----------------------------------------------------------------------------
        MSDLVARTGR QQRYDAGCRLIAG                                                                            
Subjt:  MSDLVARTGRQQQRYDAGCRLIAG----------------------------------------------------------------------------

Query:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDE
        KTQQDEF+P+GLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIE+CRHAWMRDALV GFNKWHA++M+DE
Subjt:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDE

A0A6J1KKB0 nudix hydrolase 16, mitochondrial-like1.5e-4156.32Show/hide
Query:  MSDLVARTGRQQQRYDAGCRLIAG----------------------------------------------------------------------------
        MSDLVARTGRQQQRYDAGCRLIAG                                                                            
Subjt:  MSDLVARTGRQQQRYDAGCRLIAG----------------------------------------------------------------------------

Query:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES
        KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES
Subjt:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES

SwissProt top hitse value%identityAlignment
Q52K88 Nudix hydrolase 13, mitochondrial5.6e-0952.08Show/hide
Query:  GLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL
        G C+  M+AL V EEL  WPEQ+ R R W+ + EA+E CR+ WM+ AL
Subjt:  GLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL

Q8VY81 Nudix hydrolase 21, chloroplastic1.4e-0745.83Show/hide
Query:  MYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNK
        M+ L V+++ E WPE   R R WV++ EAIE C+++WMR+AL    N+
Subjt:  MYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNK

Q93ZY7 Nudix hydrolase 12, mitochondrial8.7e-1054.17Show/hide
Query:  GLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL
        G C+  M+AL V EELE WPE+  R R W+T+ EA+E CR+ WM+ AL
Subjt:  GLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL

Q9LHK1 Nudix hydrolase 16, mitochondrial1.1e-2539.41Show/hide
Query:  MSDLVARTGRQQQRYDAGCRLIAG----------------------------------------------------------------------------
        M DLVARTGR QQRY+ G RL+AG                                                                            
Subjt:  MSDLVARTGRQQQRYDAGCRLIAG----------------------------------------------------------------------------

Query:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHM
        K+ QDEFSPEGLC+AAMYAL+V EEL +WPE  TR R W+TI EA+ESCRH WM+DALV GF KWH + M
Subjt:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHM

Q9ZU95 Nudix hydrolase 17, mitochondrial5.3e-0750Show/hide
Query:  MYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL
        M+ + V E+LE WPEQ+ R R W+ + EA E+CR  WM++AL
Subjt:  MYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL

Arabidopsis top hitse value%identityAlignment
AT1G12880.1 nudix hydrolase homolog 126.2e-1154.17Show/hide
Query:  GLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL
        G C+  M+AL V EELE WPE+  R R W+T+ EA+E CR+ WM+ AL
Subjt:  GLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL

AT3G12600.1 nudix hydrolase homolog 168.0e-2739.41Show/hide
Query:  MSDLVARTGRQQQRYDAGCRLIAG----------------------------------------------------------------------------
        M DLVARTGR QQRY+ G RL+AG                                                                            
Subjt:  MSDLVARTGRQQQRYDAGCRLIAG----------------------------------------------------------------------------

Query:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHM
        K+ QDEFSPEGLC+AAMYAL+V EEL +WPE  TR R W+TI EA+ESCRH WM+DALV GF KWH + M
Subjt:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHM

AT3G12600.2 nudix hydrolase homolog 161.4e-2670Show/hide
Query:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHM
        K+ QDEFSPEGLC+AAMYAL+V EEL +WPE  TR R W+TI EA+ESCRH WM+DALV GF KWH + M
Subjt:  KTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHM

AT3G26690.1 nudix hydrolase homolog 134.0e-1052.08Show/hide
Query:  GLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL
        G C+  M+AL V EEL  WPEQ+ R R W+ + EA+E CR+ WM+ AL
Subjt:  GLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL

AT3G26690.2 nudix hydrolase homolog 134.0e-1052.08Show/hide
Query:  GLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL
        G C+  M+AL V EEL  WPEQ+ R R W+ + EA+E CR+ WM+ AL
Subjt:  GLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGATTTGGTGGCCCGCACCGGACGGCAGCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGTAAAACACAGCAAGATGAGTTCAGTCCAGAAGGACTGTG
TAGAGCAGCAATGTATGCTTTGTTTGTGAATGAGGAGCTTGAGTCATGGCCGGAGCAGAACACAAGAAACAGAAGCTGGGTGACCATTCCTGAGGCCATTGAAAGCTGCA
GGCACGCGTGGATGAGAGATGCCCTTGTCATTGGTTTCAACAAATGGCATGCACAACATATGAACGATGAATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGATTTGGTGGCCCGCACCGGACGGCAGCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGTAAAACACAGCAAGATGAGTTCAGTCCAGAAGGACTGTG
TAGAGCAGCAATGTATGCTTTGTTTGTGAATGAGGAGCTTGAGTCATGGCCGGAGCAGAACACAAGAAACAGAAGCTGGGTGACCATTCCTGAGGCCATTGAAAGCTGCA
GGCACGCGTGGATGAGAGATGCCCTTGTCATTGGTTTCAACAAATGGCATGCACAACATATGAACGATGAATCTTGA
Protein sequenceShow/hide protein sequence
MSDLVARTGRQQQRYDAGCRLIAGKTQQDEFSPEGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAIESCRHAWMRDALVIGFNKWHAQHMNDES