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Carg20563 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20563
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:644999..647299
RNA-Seq ExpressionCarg20563
SyntenyCarg20563
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585266.1 hypothetical protein SDJN03_17999, partial [Cucurbita argyrosperma subsp. sororia]1.0e-0596.43Show/hide
Query:  EEATKPSGSPFARGGLFNSLVRSRFDHN
        +EATKPSGSPFARGGLFNSLVRSRFDHN
Subjt:  EEATKPSGSPFARGGLFNSLVRSRFDHN
KAG7020191.1 hypothetical protein SDJN02_16874, partial [Cucurbita argyrosperma subsp. argyrosperma]9.7e-73100Show/hide
Query:  SLKSGTFSRNGSSGDWRGLEQTPQYPNPPTPQAPRPRPFDSPTQIPVGTQQRCRLLPQLPRSNSLIETRDCRYSSNHRHRLYDSFTGLHLTPSNGCRLEE
        SLKSGTFSRNGSSGDWRGLEQTPQYPNPPTPQAPRPRPFDSPTQIPVGTQQRCRLLPQLPRSNSLIETRDCRYSSNHRHRLYDSFTGLHLTPSNGCRLEE
Subjt:  SLKSGTFSRNGSSGDWRGLEQTPQYPNPPTPQAPRPRPFDSPTQIPVGTQQRCRLLPQLPRSNSLIETRDCRYSSNHRHRLYDSFTGLHLTPSNGCRLEE

Query:  ATKPSGSPFARGGLFNSLVRSRFDHNRLPYRFVVQI
        ATKPSGSPFARGGLFNSLVRSRFDHNRLPYRFVVQI
Subjt:  ATKPSGSPFARGGLFNSLVRSRFDHNRLPYRFVVQI
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCTTGAAAAGTGGAACATTTTCACGCAACGGTTCGTCTGGAGATTGGCGTGGCCTTGAACAAACCCCCCAATACCCCAACCCCCCAACCCCCCAAGCCCCCAGGCCCCG
CCCCTTCGATTCACCCACACAGATACCAGTAGGCACACAGCAGCGCTGTCGTCTTCTTCCTCAGCTGCCCAGATCCAATTCACTGATAGAAACCAGGGATTGCAGATACT
CTTCGAACCATCGGCATCGCTTATATGATTCCTTTACTGGCTTACACCTTACCCCGTCAAATGGTTGTCGTTTAGAGGAAGCTACTAAGCCAAGTGGTTCGCCGTTCGCT
CGTGGGGGTTTGTTTAATAGCTTGGTTCGTTCTAGGTTCGATCACAACAGGTTGCCATATCGGTTCGTCGTACAGATATAA
mRNA sequenceShow/hide mRNA sequence
TCCTTGAAAAGTGGAACATTTTCACGCAACGGTTCGTCTGGAGATTGGCGTGGCCTTGAACAAACCCCCCAATACCCCAACCCCCCAACCCCCCAAGCCCCCAGGCCCCG
CCCCTTCGATTCACCCACACAGATACCAGTAGGCACACAGCAGCGCTGTCGTCTTCTTCCTCAGCTGCCCAGATCCAATTCACTGATAGAAACCAGGGATTGCAGATACT
CTTCGAACCATCGGCATCGCTTATATGATTCCTTTACTGGCTTACACCTTACCCCGTCAAATGGTTGTCGTTTAGAGGAAGCTACTAAGCCAAGTGGTTCGCCGTTCGCT
CGTGGGGGTTTGTTTAATAGCTTGGTTCGTTCTAGGTTCGATCACAACAGGTTGCCATATCGGTTCGTCGTACAGATATAA
Protein sequenceShow/hide protein sequence
SLKSGTFSRNGSSGDWRGLEQTPQYPNPPTPQAPRPRPFDSPTQIPVGTQQRCRLLPQLPRSNSLIETRDCRYSSNHRHRLYDSFTGLHLTPSNGCRLEEATKPSGSPFA
RGGLFNSLVRSRFDHNRLPYRFVVQI