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Carg20584 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20584
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein SPIRAL1-like 1
Genome locationCarg_Chr12:543092..544804
RNA-Seq ExpressionCarg20584
SyntenyCarg20584
Gene Ontology termsGO:0043622 - cortical microtubule organization (biological process)
GO:0010005 - cortical microtubule, transverse to long axis (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR039613 - Protein SPIRAL1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585249.1 Protein SPIRAL1-like 1, partial [Cucurbita argyrosperma subsp. sororia]2.6e-59100Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
        ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK

XP_022951957.1 protein SPIRAL1-like 1 [Cucurbita moschata]4.1e-5797.71Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQ--APAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTG
        MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQ  APAPAPAPAPAPAPRSNE KPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTG
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQ--APAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTG

Query:  NFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
        NFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Subjt:  NFITDRPSTKVHAAPGGGSSLDYLFGGAGGK

XP_022961880.1 protein SPIRAL1-like 2 [Cucurbita moschata]3.0e-4786.05Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVSSGGGQSSLGYLFGSGE+PNAGAPKGGQAP             SNEGK VSKPAASKPAATASPP D+ KQIPAGIHSSSSNNYLRADGQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
        ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK

XP_023002715.1 protein SPIRAL1-like 1 [Cucurbita maxima]4.1e-5797.67Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAP PAPRSNEGK VSKPAA KPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
        ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK

XP_023537697.1 protein SPIRAL1-like 1 [Cucurbita pepo subsp. pepo]1.3e-5899.22Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNE KPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
        ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK

TrEMBL top hitse value%identityAlignment
A0A1S3BCR3 protein SPIRAL1-like 11.1e-4483.72Show/hide
Query:  GRGVSSGGGQSSLGYLFGSGESPNAGAPKGG-QAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF
        GRGVSSGGGQSSLGYLFG G++PNAGAPKGG QAP P           SNEGK VSKPA SKPAATASPP D  KQIPAGIHSSSSNNYLRADGQNTGNF
Subjt:  GRGVSSGGGQSSLGYLFGSGESPNAGAPKGG-QAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
        ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK

A0A6J1GJ28 protein SPIRAL1-like 12.0e-5797.71Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQ--APAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTG
        MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQ  APAPAPAPAPAPAPRSNE KPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTG
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQ--APAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTG

Query:  NFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
        NFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Subjt:  NFITDRPSTKVHAAPGGGSSLDYLFGGAGGK

A0A6J1HDG7 protein SPIRAL1-like 21.4e-4786.05Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVSSGGGQSSLGYLFGSGE+PNAGAPKGGQAP             SNEGK VSKPAASKPAATASPP D+ KQIPAGIHSSSSNNYLRADGQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
        ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK

A0A6J1K972 protein SPIRAL1-like 21.4e-4786.05Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVSSGGGQSSLGYLFGSGE+PNAGAPKGGQAP             SNEGK VSKPAASKPAATASPP D+ KQIPAGIHSSSSNNYLRADGQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
        ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK

A0A6J1KPR8 protein SPIRAL1-like 12.0e-5797.67Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAP PAPRSNEGK VSKPAA KPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
        ITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGGAGGK

SwissProt top hitse value%identityAlignment
B3H4F1 Protein SPIRAL1-like 16.5e-2965.35Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVS GGGQSSLGYLFGSGE             AP PA   APAP S+E  P+S  A   P   A+   +  KQIPAGI+ SS+NNY+RADGQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGGAG
        +TDRPSTKVHAAPGGGSSLDYLFGG G
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGGAG

Q2QQ99 Protein SPIRAL1-like 33.3e-2557.6Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVSSGGGQSSLGYLFG GE     APK  + PAP   PAP                        S   +  K+IPAGI SS +NNY+RA+GQN GNF
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGG
        +TDRPSTKV AAPGGGSSLDYLF G
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGG

Q7Y1L9 Protein SPIRAL1-like 11.0e-2965.87Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSS-SSNNYLRADGQNTGN
        M RG S+GGGQSSLGYLFG  E+P    P    APA APAPAPAPAP +    P  KP+ +K  AT        KQIPAGI  S S+NNY RADGQNTGN
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSS-SSNNYLRADGQNTGN

Query:  FITDRPSTKVHAAPGGGSSLDYLFGG
        F+TDRPSTKVHAAPGGGSSL YLFGG
Subjt:  FITDRPSTKVHAAPGGGSSLDYLFGG

Q9LE54 Protein SPIRAL1-like 27.9e-2760Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVS+GGGQSSLGYLFGSGE+P   A    + PA   + A AP  +                A A+   DS KQ+PAG++S+S+NNY+RA+GQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGG
        ITDRPSTKVH+APGGGSSLDYLFGG
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGG

Q9SJW3 Protein SPIRAL11.3e-2460.77Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAP-RSNEG--KPVSKPAAS--KPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQ
        MGRG S GGGQSSL YLF            GG APAP P PAP PAP  SN G   PV+   A+    A T+  P +  KQIPAGI  +  NNY RA+GQ
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAP-RSNEG--KPVSKPAAS--KPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQ

Query:  NTGNFITDRPSTKVHAAPGGGSSLDYLFGG
        NTGNF+TDRPSTKVHAAPGGGSSLDYLF G
Subjt:  NTGNFITDRPSTKVHAAPGGGSSLDYLFGG

Arabidopsis top hitse value%identityAlignment
AT1G26355.1 SPIRAL1-like14.6e-3065.35Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVS GGGQSSLGYLFGSGE             AP PA   APAP S+E  P+S  A   P   A+   +  KQIPAGI+ SS+NNY+RADGQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGGAG
        +TDRPSTKVHAAPGGGSSLDYLFGG G
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGGAG

AT1G69230.1 SPIRAL1-like25.6e-2860Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVS+GGGQSSLGYLFGSGE+P   A    + PA   + A AP  +                A A+   DS KQ+PAG++S+S+NNY+RA+GQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGG
        ITDRPSTKVH+APGGGSSLDYLFGG
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGG

AT1G69230.2 SPIRAL1-like25.6e-2860Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVS+GGGQSSLGYLFGSGE+P   A    + PA   + A AP  +                A A+   DS KQ+PAG++S+S+NNY+RA+GQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  ITDRPSTKVHAAPGGGSSLDYLFGG
        ITDRPSTKVH+APGGGSSLDYLFGG
Subjt:  ITDRPSTKVHAAPGGGSSLDYLFGG

AT2G03680.1 spiral19.0e-2660.77Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAP-RSNEG--KPVSKPAAS--KPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQ
        MGRG S GGGQSSL YLF            GG APAP P PAP PAP  SN G   PV+   A+    A T+  P +  KQIPAGI  +  NNY RA+GQ
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAP-RSNEG--KPVSKPAAS--KPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQ

Query:  NTGNFITDRPSTKVHAAPGGGSSLDYLFGG
        NTGNF+TDRPSTKVHAAPGGGSSLDYLF G
Subjt:  NTGNFITDRPSTKVHAAPGGGSSLDYLFGG

AT2G03680.2 spiral19.0e-2660.77Show/hide
Query:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAP-RSNEG--KPVSKPAAS--KPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQ
        MGRG S GGGQSSL YLF            GG APAP P PAP PAP  SN G   PV+   A+    A T+  P +  KQIPAGI  +  NNY RA+GQ
Subjt:  MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAP-RSNEG--KPVSKPAAS--KPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQ

Query:  NTGNFITDRPSTKVHAAPGGGSSLDYLFGG
        NTGNF+TDRPSTKVHAAPGGGSSLDYLF G
Subjt:  NTGNFITDRPSTKVHAAPGGGSSLDYLFGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCGTGGAGTTAGCAGTGGTGGTGGGCAGAGCTCATTGGGGTATCTGTTTGGAAGTGGAGAATCTCCCAATGCAGGTGCCCCCAAAGGTGGCCAAGCACCAGCTCC
AGCGCCAGCGCCAGCGCCAGCACCAGCACCACGTTCTAATGAAGGAAAACCTGTATCCAAACCAGCAGCTTCCAAACCTGCTGCTACTGCTTCACCACCTACAGATTCTG
GCAAGCAGATTCCAGCTGGTATTCATAGTAGCTCCTCGAACAACTATTTGAGGGCTGATGGTCAGAACACTGGCAATTTCATAACGGATCGGCCTTCAACCAAGGTCCAC
GCAGCTCCTGGCGGTGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAATGA
mRNA sequenceShow/hide mRNA sequence
TCCGTTTCTTCTGGTTGGAAGGCAAGCTTCTGAGTTGTGACATTTGAAAGAAATCAAAGAGCCATGGGCCGTGGAGTTAGCAGTGGTGGTGGGCAGAGCTCATTGGGGTA
TCTGTTTGGAAGTGGAGAATCTCCCAATGCAGGTGCCCCCAAAGGTGGCCAAGCACCAGCTCCAGCGCCAGCGCCAGCGCCAGCACCAGCACCACGTTCTAATGAAGGAA
AACCTGTATCCAAACCAGCAGCTTCCAAACCTGCTGCTACTGCTTCACCACCTACAGATTCTGGCAAGCAGATTCCAGCTGGTATTCATAGTAGCTCCTCGAACAACTAT
TTGAGGGCTGATGGTCAGAACACTGGCAATTTCATAACGGATCGGCCTTCAACCAAGGTCCACGCAGCTCCTGGCGGTGGATCTTCTCTGGATTATCTGTTTGGTGGTGC
TGGTGGAAAATGAAAGCTACCAAATCATAATTAAATAGAGCCTATTTGACTATCCAATTTATGTGAATTTTATATGATGTTGAAGGGCAATGTTTTTCGATCTGAAATAT
GATACTATGGGGCGGGACGATAACGATATGCTTTATGATGTGTAGATGCTATGGTTGCTGCTGCTCTGTTGTTGGGTTTTATTCAATCAAAATTTTTATTTTGGGTTCAT
GAAAAGCTGTTGTGGAGCTGTCTATGTCTGTCAAGGGATCTTTCTTACAAGTAATGCACAACTTTCTCTTTTGCTTTGCCCTTATGGTCTGTGTTTACTCAGATTATGAT
CACATTTTGATTGAAGGCCACACCTTTTGAATACTATGGCTACTGAAAAATGGGTCCTTTCCTTCTGTGATTTCTATTTCATCAAATTCTTGTTGATTTGGATGGGTAAC
Protein sequenceShow/hide protein sequence
MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVH
AAPGGGSSLDYLFGGAGGK