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Carg20597 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20597
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr13:315169..316708
RNA-Seq ExpressionCarg20597
SyntenyCarg20597
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019132.1 hypothetical protein SDJN02_18090, partial [Cucurbita argyrosperma subsp. argyrosperma]6.8e-150100Show/hide
Query:  MSVMLGLSSPSKFTHCTAVYATVSTASTSFISAALTLLSTTFQTSPPPIRATANSATVTTPSPPPSLNTAFFPLPQFHLIARLCIPLRSSLLLSCCQRRN
        MSVMLGLSSPSKFTHCTAVYATVSTASTSFISAALTLLSTTFQTSPPPIRATANSATVTTPSPPPSLNTAFFPLPQFHLIARLCIPLRSSLLLSCCQRRN
Subjt:  MSVMLGLSSPSKFTHCTAVYATVSTASTSFISAALTLLSTTFQTSPPPIRATANSATVTTPSPPPSLNTAFFPLPQFHLIARLCIPLRSSLLLSCCQRRN

Query:  CLLQQQAPLEKMTDRRKDLCSALDDLMQLSSLIYRTKWCKLRLKPQLLQLSETPRRARFWPFLVKILDSLAIALQMGALPGRICKYFQTHHRETLNLDRR
        CLLQQQAPLEKMTDRRKDLCSALDDLMQLSSLIYRTKWCKLRLKPQLLQLSETPRRARFWPFLVKILDSLAIALQMGALPGRICKYFQTHHRETLNLDRR
Subjt:  CLLQQQAPLEKMTDRRKDLCSALDDLMQLSSLIYRTKWCKLRLKPQLLQLSETPRRARFWPFLVKILDSLAIALQMGALPGRICKYFQTHHRETLNLDRR

Query:  RRAARILNTRARDYHPQWKNSRSSPMQGLSIHELNWEEPPIGLRRCFPCILKRRPTPSTHRHETLRLLSSPLTDS
        RRAARILNTRARDYHPQWKNSRSSPMQGLSIHELNWEEPPIGLRRCFPCILKRRPTPSTHRHETLRLLSSPLTDS
Subjt:  RRAARILNTRARDYHPQWKNSRSSPMQGLSIHELNWEEPPIGLRRCFPCILKRRPTPSTHRHETLRLLSSPLTDS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTAATGCTCGGCCTCTCTTCTCCCTCCAAATTCACACACTGCACCGCCGTATACGCCACCGTCTCCACCGCCTCCACTTCCTTCATCTCCGCCGCTCTAACCCT
CTTATCCACTACATTCCAAACCTCGCCGCCCCCAATTCGCGCCACTGCAAATTCCGCCACCGTCACCACACCTTCACCCCCGCCATCTCTGAACACCGCCTTTTTCCCCC
TACCTCAGTTCCATTTGATAGCTCGCCTTTGTATACCACTCCGAAGCTCCCTGCTCCTATCTTGTTGTCAGAGGAGAAATTGCTTGTTGCAGCAGCAAGCTCCGTTAGAG
AAAATGACCGACCGGAGGAAGGATTTATGTTCAGCTCTTGATGATCTGATGCAGCTAAGCAGTTTGATATACAGAACAAAATGGTGCAAGCTCCGGCTAAAACCCCAATT
GCTCCAACTATCAGAAACGCCACGGCGAGCCCGTTTCTGGCCTTTTTTGGTGAAGATTTTGGATTCTTTGGCAATAGCACTGCAAATGGGAGCTCTTCCTGGCAGGATTT
GCAAATATTTCCAGACCCATCACAGAGAAACGCTGAATTTGGATAGACGCCGCAGAGCTGCAAGGATCTTGAACACAAGGGCCAGGGATTATCATCCCCAATGGAAGAAC
AGCCGCTCGTCCCCAATGCAAGGGCTGAGTATTCATGAGCTGAATTGGGAGGAACCTCCAATTGGCCTGCGCCGTTGTTTCCCTTGCATACTAAAGCGCCGCCCGACGCC
GTCAACCCACAGACATGAGACTCTCCGGCTACTAAGCTCACCATTGACAGATTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGTAATGCTCGGCCTCTCTTCTCCCTCCAAATTCACACACTGCACCGCCGTATACGCCACCGTCTCCACCGCCTCCACTTCCTTCATCTCCGCCGCTCTAACCCT
CTTATCCACTACATTCCAAACCTCGCCGCCCCCAATTCGCGCCACTGCAAATTCCGCCACCGTCACCACACCTTCACCCCCGCCATCTCTGAACACCGCCTTTTTCCCCC
TACCTCAGTTCCATTTGATAGCTCGCCTTTGTATACCACTCCGAAGCTCCCTGCTCCTATCTTGTTGTCAGAGGAGAAATTGCTTGTTGCAGCAGCAAGCTCCGTTAGAG
AAAATGACCGACCGGAGGAAGGATTTATGTTCAGCTCTTGATGATCTGATGCAGCTAAGCAGTTTGATATACAGAACAAAATGGTGCAAGCTCCGGCTAAAACCCCAATT
GCTCCAACTATCAGAAACGCCACGGCGAGCCCGTTTCTGGCCTTTTTTGGTGAAGATTTTGGATTCTTTGGCAATAGCACTGCAAATGGGAGCTCTTCCTGGCAGGATTT
GCAAATATTTCCAGACCCATCACAGAGAAACGCTGAATTTGGATAGACGCCGCAGAGCTGCAAGGATCTTGAACACAAGGGCCAGGGATTATCATCCCCAATGGAAGAAC
AGCCGCTCGTCCCCAATGCAAGGGCTGAGTATTCATGAGCTGAATTGGGAGGAACCTCCAATTGGCCTGCGCCGTTGTTTCCCTTGCATACTAAAGCGCCGCCCGACGCC
GTCAACCCACAGACATGAGACTCTCCGGCTACTAAGCTCACCATTGACAGATTCCTGA
Protein sequenceShow/hide protein sequence
MSVMLGLSSPSKFTHCTAVYATVSTASTSFISAALTLLSTTFQTSPPPIRATANSATVTTPSPPPSLNTAFFPLPQFHLIARLCIPLRSSLLLSCCQRRNCLLQQQAPLE
KMTDRRKDLCSALDDLMQLSSLIYRTKWCKLRLKPQLLQLSETPRRARFWPFLVKILDSLAIALQMGALPGRICKYFQTHHRETLNLDRRRRAARILNTRARDYHPQWKN
SRSSPMQGLSIHELNWEEPPIGLRRCFPCILKRRPTPSTHRHETLRLLSSPLTDS