; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20603 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20603
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionnudC domain-containing protein 2-like
Genome locationCarg_Chr13:342067..344900
RNA-Seq ExpressionCarg20603
SyntenyCarg20603
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR007052 - CS domain
IPR008978 - HSP20-like chaperone
IPR037898 - NudC family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019138.1 NudC domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-79100Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLNVEDDIMHITLQKRDKGQTWASPIQGQGQLDPYTT
        MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLNVEDDIMHITLQKRDKGQTWASPIQGQGQLDPYTT
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLNVEDDIMHITLQKRDKGQTWASPIQGQGQLDPYTT

Query:  DLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRLG
        DLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRLG
Subjt:  DLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRLG

XP_004151457.1 nudC domain-containing protein 2 [Cucumis sativus]1.5e-7185.26Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRHSFLHNGQ+VFEWDQTLEEVNIYINLPPNV+SKQFYCKIQS HVE+GIKGNPPYLN               +EDDIMHITLQKRDKGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR
        ASPIQGQGQLDPY++DLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGGIR
Subjt:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR

XP_008457374.1 PREDICTED: nudC domain-containing protein 2 [Cucumis melo]2.3e-7286.54Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNV+SKQFYCKIQS HVEVGIKGNPPYLN               +EDDIMHITLQKRDKGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR
        ASPIQGQGQLDPY++DLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGGIR
Subjt:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR

XP_022964859.1 nudC domain-containing protein 2-like [Cucurbita moschata]2.6e-7689.87Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN               +EDDIMHITLQKRDKGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRLG
        ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRLG
Subjt:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRLG

XP_038894388.1 nudC domain-containing protein 2 [Benincasa hispida]5.4e-7486.71Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRHSFLHNGQKVFEWDQTLE+VNIYINLPPNVHSKQFYCKIQS HVEVGIKGNPP+LN               +EDDIMHITLQKRDKGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRLG
        ASPIQGQGQLDPY+TDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGGIRLG
Subjt:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRLG

TrEMBL top hitse value%identityAlignment
A0A0A0LV57 CS domain-containing protein7.1e-7285.26Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRHSFLHNGQ+VFEWDQTLEEVNIYINLPPNV+SKQFYCKIQS HVE+GIKGNPPYLN               +EDDIMHITLQKRDKGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR
        ASPIQGQGQLDPY++DLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGGIR
Subjt:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR

A0A1S3C618 nudC domain-containing protein 21.1e-7286.54Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNV+SKQFYCKIQS HVEVGIKGNPPYLN               +EDDIMHITLQKRDKGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR
        ASPIQGQGQLDPY++DLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGGIR
Subjt:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR

A0A5A7SMF6 NudC domain-containing protein 21.1e-7286.54Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNV+SKQFYCKIQS HVEVGIKGNPPYLN               +EDDIMHITLQKRDKGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR
        ASPIQGQGQLDPY++DLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGGIR
Subjt:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR

A0A6J1HPE6 nudC domain-containing protein 2-like1.3e-7689.87Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN               +EDDIMHITLQKRDKGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRLG
        ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRLG
Subjt:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRLG

A0A6J1I2V0 nudC domain-containing protein 2-like1.3e-7689.87Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN               +EDDIMHITLQKRDKGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRLG
        ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRLG
Subjt:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRLG

SwissProt top hitse value%identityAlignment
Q5M823 NudC domain-containing protein 29.1e-1636.8Show/hide
Query:  EWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKG--------------NPPYLNVEDDIM---HITLQKRDKGQTWASPIQGQGQLDPYTTDLEQ
        +W QTLEEV I + +PP   ++   C +QS HV + + G              +     +ED  M    +T  KRD    W S ++ +   DP+  D  Q
Subjt:  EWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKG--------------NPPYLNVEDDIM---HITLQKRDKGQTWASPIQGQGQLDPYTTDLEQ

Query:  KRLMLQRFQEENPGFDFSQAQFSGN
        ++L L+RFQ+ENPGFDFS A+ SGN
Subjt:  KRLMLQRFQEENPGFDFSQAQFSGN

Q8WVJ2 NudC domain-containing protein 24.1e-1635.25Show/hide
Query:  EKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKG--------------NPPYLNVEDDIM---HITLQKRDKGQTWASPIQ
        E+R   +  G    +W QTLEEV I + +PP   ++   C +QS HV + + G              +     +ED  M    +T  KRD    W S ++
Subjt:  EKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKG--------------NPPYLNVEDDIM---HITLQKRDKGQTWASPIQ

Query:  GQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGN
         +   DP+  D  Q++L L+RFQ+ENPGFDFS A+ SGN
Subjt:  GQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGN

Q9CQ48 NudC domain-containing protein 24.1e-1635.25Show/hide
Query:  EKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKG--------------NPPYLNVEDDIM---HITLQKRDKGQTWASPIQ
        E+R   +  G    +W QTLEEV I + +PP   ++   C +QS HV + + G              +     +ED  M    +T  KRD    W S ++
Subjt:  EKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKG--------------NPPYLNVEDDIM---HITLQKRDKGQTWASPIQ

Query:  GQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGN
         +   DP+  D  Q++L L+RFQ+ENPGFDFS A+ SGN
Subjt:  GQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGN

Q9STN7 Protein BOBBER 21.4e-0825.95Show/hide
Query:  FEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKG---------------NPPYLNVEDD-IMHITLQKRDKGQTWASPIQGQ------------
        + W Q L+EV I I +P    S+   C+I+   ++VG+KG               +  + N+ED  ++ + L K+D+ + W   ++G+            
Subjt:  FEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKG---------------NPPYLNVEDD-IMHITLQKRDKGQTWASPIQGQ------------

Query:  ---GQLDPYT--------------------TDLEQKRLMLQRFQEENPGFDFSQAQFS
           G LDP T                    +D  +K+ ML++F  +NPG DFS A+F+
Subjt:  ---GQLDPYT--------------------TDLEQKRLMLQRFQEENPGFDFSQAQFS

Arabidopsis top hitse value%identityAlignment
AT4G27890.1 HSP20-like chaperones superfamily protein1.0e-0925.95Show/hide
Query:  FEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKG---------------NPPYLNVEDD-IMHITLQKRDKGQTWASPIQGQ------------
        + W Q L+EV I I +P    S+   C+I+   ++VG+KG               +  + N+ED  ++ + L K+D+ + W   ++G+            
Subjt:  FEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKG---------------NPPYLNVEDD-IMHITLQKRDKGQTWASPIQGQ------------

Query:  ---GQLDPYT--------------------TDLEQKRLMLQRFQEENPGFDFSQAQFS
           G LDP T                    +D  +K+ ML++F  +NPG DFS A+F+
Subjt:  ---GQLDPYT--------------------TDLEQKRLMLQRFQEENPGFDFSQAQFS

AT5G58740.1 HSP20-like chaperones superfamily protein4.9e-7382.05Show/hide
Query:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW
        MAEKLAPEKRH F+HNGQKVFEWDQTLEEVN+YI LPPNVH K F+CKIQS H+EVGIKGNPPYLN               +EDDIMHITLQKR+KGQTW
Subjt:  MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLN---------------VEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR
        ASPI GQGQLDPY TDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR
Subjt:  ASPIQGQGQLDPYTTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGAAATTGGCTCCAGAAAAGCGCCATAGCTTCCTCCACAACGGTCAGAAAGTGTTTGAATGGGATCAGACTCTGGAGGAGGTTAACATTTATATTAATTTGCC
TCCAAATGTTCATTCGAAGCAATTCTACTGCAAGATTCAGTCTACGCATGTCGAGGTTGGCATCAAGGGGAATCCTCCTTATCTCAATGTCGAGGATGACATAATGCACA
TTACACTGCAGAAGAGGGACAAGGGTCAGACATGGGCTTCTCCTATACAGGGTCAGGGTCAGCTTGATCCATACACCACTGATCTTGAGCAGAAGCGCCTTATGCTCCAG
AGGTTTCAAGAGGAGAACCCTGGATTTGACTTCTCACAAGCTCAGTTTTCGGGCAACTGTCCTGATCCAAGGAGCTTCATGGGGGGAATTCGCTTAGGTTGA
mRNA sequenceShow/hide mRNA sequence
GGAACTTCTCGTTGGAGAAAAAGGAAGGCACTGGGAAAAGAAAAGCTTCTGTGAAATTCGCGGGAAAGGGGAGAAGCAAGCCCTAAGAAATGGCGGAGAAATTGGCTCCA
GAAAAGCGCCATAGCTTCCTCCACAACGGTCAGAAAGTGTTTGAATGGGATCAGACTCTGGAGGAGGTTAACATTTATATTAATTTGCCTCCAAATGTTCATTCGAAGCA
ATTCTACTGCAAGATTCAGTCTACGCATGTCGAGGTTGGCATCAAGGGGAATCCTCCTTATCTCAATGTCGAGGATGACATAATGCACATTACACTGCAGAAGAGGGACA
AGGGTCAGACATGGGCTTCTCCTATACAGGGTCAGGGTCAGCTTGATCCATACACCACTGATCTTGAGCAGAAGCGCCTTATGCTCCAGAGGTTTCAAGAGGAGAACCCT
GGATTTGACTTCTCACAAGCTCAGTTTTCGGGCAACTGTCCTGATCCAAGGAGCTTCATGGGGGGAATTCGCTTAGGTTGACGAAGATAGTTTTGCATTTATAACTTGCA
AGGGCGTGACATTTTGCTAATGCTCGGTAAATAATGTGTAGATTTTCTACGGGTCTTGATTTATGCAATCCATATAATGACTGCTATTGCGAAAATGATGTGTACTGGGT
TTTCATGTAATCGCTGCAATGAACTGAAAATATTTATGTGATATAAATTTAACTTCCAAATATTTTGTATTATAGTTTAACCTTCTATTTGGTTTGATATAAACCAGAGT
TCCAAATTTGATCGCAGATGCAAGTTCATGGTAAAAATAGCGAACCTGGTACCATCATTCTCTATATATTTGTTTATCCAAATCCTATTCAGTAAAATATGTTGA
Protein sequenceShow/hide protein sequence
MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSTHVEVGIKGNPPYLNVEDDIMHITLQKRDKGQTWASPIQGQGQLDPYTTDLEQKRLMLQ
RFQEENPGFDFSQAQFSGNCPDPRSFMGGIRLG