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Carg20627 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20627
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionmitochondrial import inner membrane translocase subunit TIM10-like
Genome locationCarg_Chr13:531981..534280
RNA-Seq ExpressionCarg20627
SyntenyCarg20627
Gene Ontology termsGO:0045039 - protein insertion into mitochondrial inner membrane (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR004217 - Tim10-like
IPR035427 - Tim10-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583395.1 Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. sororia]5.5e-42100Show/hide
Query:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM
        MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM
Subjt:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM

XP_004145269.1 mitochondrial import inner membrane translocase subunit TIM10 [Cucumis sativus]4.0e-4095.29Show/hide
Query:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM
        MASPN+M SA+DKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPPM
Subjt:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM

XP_022964898.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita moschata]5.5e-42100Show/hide
Query:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM
        MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM
Subjt:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM

XP_022970585.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita maxima]2.7e-4198.82Show/hide
Query:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM
        MASPNDM SAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM
Subjt:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM

XP_038894964.1 mitochondrial import inner membrane translocase subunit TIM10 [Benincasa hispida]1.5e-3994.12Show/hide
Query:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM
        MASPN+M SA+DKEQIFGMAEKEMEYRVELFNKLT SCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPPM
Subjt:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM

TrEMBL top hitse value%identityAlignment
A0A0A0LVG1 zf-Tim10_DDP domain-containing protein1.9e-4095.29Show/hide
Query:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM
        MASPN+M SA+DKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPPM
Subjt:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM

A0A1S3C655 mitochondrial import inner membrane translocase subunit TIM101.9e-4095.29Show/hide
Query:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM
        MASPN+M SA+DKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPPM
Subjt:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM

A0A5D3BDG9 Mitochondrial import inner membrane translocase subunit TIM10-like1.9e-4095.29Show/hide
Query:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM
        MASPN+M SA+DKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPPM
Subjt:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM

A0A6J1HM98 mitochondrial import inner membrane translocase subunit TIM10-like2.7e-42100Show/hide
Query:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM
        MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM
Subjt:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM

A0A6J1I395 mitochondrial import inner membrane translocase subunit TIM10-like1.3e-4198.82Show/hide
Query:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM
        MASPNDM SAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM
Subjt:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM

SwissProt top hitse value%identityAlignment
P87108 Mitochondrial import inner membrane translocase subunit TIM105.2e-1140.58Show/hide
Query:  QSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQ
        Q  +  +Q    AE E++   ++FNKL  +C+ KC++  Y E ELN  E+SC+DRCV+KY+     VG+
Subjt:  QSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQ

Q759W7 Mitochondrial import inner membrane translocase subunit TIM108.9e-1139.13Show/hide
Query:  QSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQ
        Q  +  +Q    AE E++   ++FNKL  +C  KC+D  Y E +LN  E++C+DRCV+KY+     VG+
Subjt:  QSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQ

Q9W2D6 Mitochondrial import inner membrane translocase subunit Tim101.2e-1042.86Show/hide
Query:  SAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLL
        S  D+ ++  M E E+E   +L+N++T +C  KC+  RY ESEL  GE  CIDRCV+KY  +   +G+ L
Subjt:  SAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLL

Q9Y8A8 Mitochondrial import inner membrane translocase subunit tim102.0e-1042.42Show/hide
Query:  MDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQ
        M  EQ    AE E+E   ++FN+L++SC  KC+   Y+E +LN GE+ C+DRCV K++ V   V +
Subjt:  MDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQ

Q9ZW33 Mitochondrial import inner membrane translocase subunit TIM101.3e-3072.94Show/hide
Query:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM
        MASP  +   + KEQ F MA+ EMEYRVELFNKL Q+CFNKCVDKRYKE+ELNMGENSCIDRCVSKYW V  +VGQLL +G+PP+
Subjt:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM

Arabidopsis top hitse value%identityAlignment
AT2G29530.1 Tim10/DDP family zinc finger protein9.4e-3272.94Show/hide
Query:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM
        MASP  +   + KEQ F MA+ EMEYRVELFNKL Q+CFNKCVDKRYKE+ELNMGENSCIDRCVSKYW V  +VGQLL +G+PP+
Subjt:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM

AT2G29530.2 Tim10/DDP family zinc finger protein9.4e-3272.94Show/hide
Query:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM
        MASP  +   + KEQ F MA+ EMEYRVELFNKL Q+CFNKCVDKRYKE+ELNMGENSCIDRCVSKYW V  +VGQLL +G+PP+
Subjt:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM

AT2G29530.3 Tim10/DDP family zinc finger protein4.1e-2755.96Show/hide
Query:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNK------------------------LTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQ
        MASP  +   + KEQ F MA+ EMEYRVELFN                         L Q+CFNKCVDKRYKE+ELNMGENSCIDRCVSKYW V  +VGQ
Subjt:  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNK------------------------LTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQ

Query:  LLGSGRPPM
        LL +G+PP+
Subjt:  LLGSGRPPM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCCGAACGATATGCAATCGGCTATGGACAAGGAACAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGCTTACACAATC
ATGTTTTAACAAATGTGTTGATAAGAGGTACAAGGAATCTGAGCTGAATATGGGTGAAAATAGTTGTATTGACCGCTGTGTTTCCAAGTATTGGCATGTAACTAATTTAG
TCGGCCAGCTACTCGGGTCGGGTAGACCTCCTATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCCGAACGATATGCAATCGGCTATGGACAAGGAACAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGCTTACACAATC
ATGTTTTAACAAATGTGTTGATAAGAGGTACAAGGAATCTGAGCTGAATATGGGTGAAAATAGTTGTATTGACCGCTGTGTTTCCAAGTATTGGCATGTAACTAATTTAG
TCGGCCAGCTACTCGGGTCGGGTAGACCTCCTATGTGAGCTGATTCTTGATCTGAGTAATTGTTTGGTGAGTTGGGAATGAAGAACTATGAATTATGCATTTTTGGCCTG
TTTAATTCTCCCATCTCATGAAATACTTTGTTTTTCTGTTCGAGAAGGCATTGATAATGGCATTATTTCATCTATAAGTGTGATGTGATTATGTTAGCCTTTGTTTCGTA
TTTTGTTTAAAAAATATTTT
Protein sequenceShow/hide protein sequence
MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM