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Carg20630 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20630
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMaternal effect embryo arrest 60
Genome locationCarg_Chr13:551396..552543
RNA-Seq ExpressionCarg20630
SyntenyCarg20630
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019165.1 hypothetical protein SDJN02_18123, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-99100Show/hide
Query:  MEMCLEELAPSSPSPSTAMSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFS
        MEMCLEELAPSSPSPSTAMSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFS
Subjt:  MEMCLEELAPSSPSPSTAMSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFS

Query:  SLVASALKQAIRIIGRDDGEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR
        SLVASALKQAIRIIGRDDGEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR
Subjt:  SLVASALKQAIRIIGRDDGEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR

XP_011658339.1 uncharacterized protein LOC101206623 [Cucumis sativus]2.2e-7381.56Show/hide
Query:  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD
        MSVVPRRRS+STRIH++ALDGIVNVNSLFTFAVFLG+ WYPTA+PA NLLPD DDGPCA A + A++LIACHVYSFSCFLFSSL+ASALKQAIR+I   D
Subjt:  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD

Query:  GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR
        G  G  +APALR+GM+ASAVGSVLGCGFLVAALLNL+QIKLG   CRRWETVAAAVPLVSLVP+ALFIYI LV+HAFTR
Subjt:  GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR

XP_022964979.1 uncharacterized protein LOC111464928 [Cucurbita moschata]9.7e-90100Show/hide
Query:  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD
        MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD
Subjt:  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD

Query:  GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR
        GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR
Subjt:  GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR

XP_022970573.1 uncharacterized protein LOC111469508 [Cucurbita maxima]1.9e-8292.74Show/hide
Query:  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD
        MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADP VNLLPD DDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIG +D
Subjt:  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD

Query:  GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR
        G HG  +APALR+GMVASAVGSVLGCGFLVAALLNLVQIKLG   CRRWETVAA VPLVSLVPMALFIYIVLVLHAFTR
Subjt:  GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR

XP_023519302.1 uncharacterized protein LOC111782741 [Cucurbita pepo subsp. pepo]1.8e-8898.88Show/hide
Query:  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD
        MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPD DDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD
Subjt:  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD

Query:  GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR
        GEHGVAYAPALR+GMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR
Subjt:  GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR

TrEMBL top hitse value%identityAlignment
A0A0A0LV03 Uncharacterized protein1.0e-7381.56Show/hide
Query:  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD
        MSVVPRRRS+STRIH++ALDGIVNVNSLFTFAVFLG+ WYPTA+PA NLLPD DDGPCA A + A++LIACHVYSFSCFLFSSL+ASALKQAIR+I   D
Subjt:  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD

Query:  GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR
        G  G  +APALR+GM+ASAVGSVLGCGFLVAALLNL+QIKLG   CRRWETVAAAVPLVSLVP+ALFIYI LV+HAFTR
Subjt:  GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR

A0A1S3C532 uncharacterized protein LOC1034971221.4e-7383.24Show/hide
Query:  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD
        MSVVPRRRS+STRIH++ALDGIVNVNSLFTFAVFLG+ WYPTA+PA NLLPD DDGPCA A + AQ+LIACHVYSFSCFLFSSL+ASALKQAIRII   D
Subjt:  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD

Query:  GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR
        G  G  +A ALR+GMVASAVGSVLGCGFLVAALLNLVQIKLG   CRRWETVAAAVPLVSLVP+ALFIYI LV+HAFTR
Subjt:  GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR

A0A5D3BFZ3 Uncharacterized protein1.4e-7383.24Show/hide
Query:  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD
        MSVVPRRRS+STRIH++ALDGIVNVNSLFTFAVFLG+ WYPTA+PA NLLPD DDGPCA A + AQ+LIACHVYSFSCFLFSSL+ASALKQAIRII   D
Subjt:  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD

Query:  GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR
        G  G  +A ALR+GMVASAVGSVLGCGFLVAALLNLVQIKLG   CRRWETVAAAVPLVSLVP+ALFIYI LV+HAFTR
Subjt:  GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR

A0A6J1HPR3 uncharacterized protein LOC1114649284.7e-90100Show/hide
Query:  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD
        MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD
Subjt:  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD

Query:  GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR
        GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR
Subjt:  GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR

A0A6J1I4A7 uncharacterized protein LOC1114695089.4e-8392.74Show/hide
Query:  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD
        MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADP VNLLPD DDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIG +D
Subjt:  MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGRDD

Query:  GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR
        G HG  +APALR+GMVASAVGSVLGCGFLVAALLNLVQIKLG   CRRWETVAA VPLVSLVPMALFIYIVLVLHAFTR
Subjt:  GEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01580.1 unknown protein4.1e-2238.51Show/hide
Query:  SSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIG---RDDGEHGV
        +S+T +HV ALDGIV+ NSLFT AVF+GI++   +D  +      D   C+      + L+   V SF+ FLFSSLVA  +K AI ++     D+     
Subjt:  SSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIG---RDDGEHGV

Query:  AYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR
             LR G+V +A GS+LGC FL+ ++++++Q++LG LSC     +   + LV LV  AL +YI  V ++F +
Subjt:  AYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR

AT3G07510.1 unknown protein4.7e-2644.15Show/hide
Query:  SSPSPSTAMSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQA
        +SP  S+  S+      ++T +HV ALDG+VNVNSLFT AVF+G++    A P  + L       C  +A  A+ L+   V SFS FLFSSLVA  LK A
Subjt:  SSPSPSTAMSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQA

Query:  IRII-GRDDGEHGVAY--APALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAF
        + ++  +D  E   A+     LR GM+ASAVGSV+GC FL+ +++N++QI+LG LSC       A   LV+LV  AL IYI   ++AF
Subjt:  IRII-GRDDGEHGVAY--APALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAF

AT3G07510.2 unknown protein4.7e-2644.15Show/hide
Query:  SSPSPSTAMSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQA
        +SP  S+  S+      ++T +HV ALDG+VNVNSLFT AVF+G++    A P  + L       C  +A  A+ L+   V SFS FLFSSLVA  LK A
Subjt:  SSPSPSTAMSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQA

Query:  IRII-GRDDGEHGVAY--APALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAF
        + ++  +D  E   A+     LR GM+ASAVGSV+GC FL+ +++N++QI+LG LSC       A   LV+LV  AL IYI   ++AF
Subjt:  IRII-GRDDGEHGVAY--APALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAF

AT3G46890.1 BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1)3.4e-3248.02Show/hide
Query:  AMSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGIT-----WYPTADPAVNLLPDGDDGPC--APAAAAAQSLIACHVYSFSCFLFSSLVASALKQA
        A+  + RR   +T IHV A+DGIVNVNSLF+ A+FLG+T      +P +  A     +     C  A   A A+ L++ HVYSFS FLFSSL+A +LKQA
Subjt:  AMSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGIT-----WYPTADPAVNLLPDGDDGPC--APAAAAAQSLIACHVYSFSCFLFSSLVASALKQA

Query:  I----------------RIIGRDDGEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRR-WETVAAAVPLVSLVPMALFIYIVLVLH
        I                R++   +G   +A   ALR+G+VAS V SVLGCGFL  AL++LVQIKLG L C+R +  +AA VPLV LVP AL IY+ LVL+
Subjt:  I----------------RIIGRDDGEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRR-WETVAAAVPLVSLVPMALFIYIVLVLH

Query:  AF
        AF
Subjt:  AF

AT5G05950.1 maternal effect embryo arrest 604.4e-4056.74Show/hide
Query:  STRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIR--------IIGRDDGE
        +T IH+ ALDGIVNVNSLFT AVF+G+ W PT DP  +L+ D +   C P A  A++L+A HVYSF+ FLFSSL+A  LKQA+R        I  R D  
Subjt:  STRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQAIR--------IIGRDDGE

Query:  HGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSC-RRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR
               ALR GMV S +GSV GCGFL+ AL+N+VQIKLGTL C     T AA VPLV LVP ALFIY+ L+L+AFTR
Subjt:  HGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSC-RRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGTGCTTAGAGGAGTTAGCACCTTCATCTCCGTCGCCGTCCACTGCCATGTCCGTCGTTCCACGGCGGCGATCCTCCTCGACCAGAATCCATGTCATGGCCCT
CGACGGCATCGTCAACGTCAACTCCCTCTTCACCTTCGCCGTCTTCCTCGGCATCACCTGGTACCCCACTGCTGACCCCGCCGTCAACCTACTTCCCGACGGTGACGACG
GCCCCTGTGCCCCAGCCGCCGCTGCCGCTCAGAGCCTCATCGCCTGCCATGTGTACTCCTTCAGCTGCTTCCTCTTCTCCAGCCTAGTCGCCTCGGCGCTAAAGCAGGCT
ATTAGAATCATCGGCCGCGACGATGGAGAGCATGGTGTAGCCTACGCGCCGGCGTTACGCATGGGGATGGTGGCGTCGGCAGTCGGGTCGGTGCTCGGATGTGGGTTTTT
GGTGGCGGCGCTGCTGAATTTGGTACAGATAAAGTTAGGGACTTTAAGTTGCCGACGGTGGGAAACGGTGGCGGCCGCCGTGCCGTTGGTGAGTTTGGTTCCTATGGCGC
TTTTCATTTACATCGTTCTTGTTCTTCACGCCTTCACGCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGATGTGCTTAGAGGAGTTAGCACCTTCATCTCCGTCGCCGTCCACTGCCATGTCCGTCGTTCCACGGCGGCGATCCTCCTCGACCAGAATCCATGTCATGGCCCT
CGACGGCATCGTCAACGTCAACTCCCTCTTCACCTTCGCCGTCTTCCTCGGCATCACCTGGTACCCCACTGCTGACCCCGCCGTCAACCTACTTCCCGACGGTGACGACG
GCCCCTGTGCCCCAGCCGCCGCTGCCGCTCAGAGCCTCATCGCCTGCCATGTGTACTCCTTCAGCTGCTTCCTCTTCTCCAGCCTAGTCGCCTCGGCGCTAAAGCAGGCT
ATTAGAATCATCGGCCGCGACGATGGAGAGCATGGTGTAGCCTACGCGCCGGCGTTACGCATGGGGATGGTGGCGTCGGCAGTCGGGTCGGTGCTCGGATGTGGGTTTTT
GGTGGCGGCGCTGCTGAATTTGGTACAGATAAAGTTAGGGACTTTAAGTTGCCGACGGTGGGAAACGGTGGCGGCCGCCGTGCCGTTGGTGAGTTTGGTTCCTATGGCGC
TTTTCATTTACATCGTTCTTGTTCTTCACGCCTTCACGCGCTAG
Protein sequenceShow/hide protein sequence
MEMCLEELAPSSPSPSTAMSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPAVNLLPDGDDGPCAPAAAAAQSLIACHVYSFSCFLFSSLVASALKQA
IRIIGRDDGEHGVAYAPALRMGMVASAVGSVLGCGFLVAALLNLVQIKLGTLSCRRWETVAAAVPLVSLVPMALFIYIVLVLHAFTR