; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20634 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20634
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCarg_Chr13:560404..562373
RNA-Seq ExpressionCarg20634
SyntenyCarg20634
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044795 - Pentatricopeptide repeat-containing protein THA8L-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022964699.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita moschata]3.3e-143100Show/hide
Query:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV
        MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV
Subjt:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV

Query:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE
        LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE
Subjt:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

XP_022970562.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita maxima]2.5e-13896.47Show/hide
Query:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV
        MAMRWFSK KLPICYSVFLRGL RRPIRDIPLPVKST+AGF PDSSR LSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV
Subjt:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV

Query:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE
        LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEW+KPDVF+YKDLIVALARSK+MDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE
Subjt:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEE+FPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

XP_023519300.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]1.0e-13998.04Show/hide
Query:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV
        MAMRWFSK KLPICYSVFLRGL  RPIRDI LPVKSTVAGFQPDSS+PLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV
Subjt:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV

Query:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE
        LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE
Subjt:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

XP_023521051.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita pepo subsp. pepo]2.9e-13997.65Show/hide
Query:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV
        MAMRWFSK KLPICYSVFLRGL  RPIRDI LPVKSTVAGFQPDSS+PLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV
Subjt:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV

Query:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE
        LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMD+AMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE
Subjt:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

XP_038895593.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Benincasa hispida]5.0e-13190.98Show/hide
Query:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV
        MA+RWFS+ KLPI  SVFLRGL RRPIRD  LPVKST+ GFQPDSSRPL GFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKL+KFMK HV
Subjt:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV

Query:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE
        LRLLKLDMI+VLGELERQEEVALAVK+FRLIQKQ+WYKPDVF+YKDLI+ALARSK+MDDAM+LWESMR+ENLFPDSQTYTEVIRGFL+YGSPSDAMNIYE
Subjt:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEE+FPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

TrEMBL top hitse value%identityAlignment
A0A0A0LVE9 Uncharacterized protein1.2e-12786.67Show/hide
Query:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV
        MA+RWFS+ KLP+  SVFL+GL RRPIRD+PLPVKST+  FQPDS RP+ GFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEK +KFMK HV
Subjt:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV

Query:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE
         RLLKLDM+AVLGELERQEEVALAVK+FRLI+KQ+WYKPDV++YKDLI+ALARSK+MDDAM+LWESMR+ENLFPDSQTYTEVIRGFL+YGSPSDAMN+YE
Subjt:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEE+FPDQHV+DPPEEIF LR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

A0A5A7SRJ7 Pentatricopeptide repeat-containing protein1.2e-12787.45Show/hide
Query:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV
        MA+RWFS+ KLPI   VFLRGL RRPIRD+PLPV ST+ GFQPDSSRP+ GFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKL KFMK HV
Subjt:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV

Query:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE
         RLLKLDM+AVLGELERQEEVALAVK+FRLI+KQ+WYKPDV++YKDLI+ALARSK+MDDAM+LWESMR+ENLFPDSQTYTEVIRGFL+YGSPSDAMN+YE
Subjt:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSP+PPDELPFRILLKGLLPHPLLRNRVKQDFEE+FPDQHV+DPPEEIF LR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

A0A6J1E045 pentatricopeptide repeat-containing protein At3g468705.6e-12889.41Show/hide
Query:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV
        MA+R FS+ KLPI  SVFLRGL RRPIRDIPLPVKS + GFQPDSSRP+ GFR YHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMK HV
Subjt:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV

Query:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE
         RLLKLDMI+VLGELERQEEVALAVK+FRLIQKQ+WYKPDVF+YKDLI+ALA SK+MDDAMELWESMRKE+LFPDSQTYTEVIRGFL+YGSPSDAMNIYE
Subjt:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRN+VKQDFEE+FPDQ+VYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

A0A6J1HLK1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic1.6e-143100Show/hide
Query:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV
        MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV
Subjt:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV

Query:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE
        LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE
Subjt:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

A0A6J1I496 protein THYLAKOID ASSEMBLY 8-like, chloroplastic1.2e-13896.47Show/hide
Query:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV
        MAMRWFSK KLPICYSVFLRGL RRPIRDIPLPVKST+AGF PDSSR LSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV
Subjt:  MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHV

Query:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE
        LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEW+KPDVF+YKDLIVALARSK+MDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE
Subjt:  LRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEE+FPDQHVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623505.7e-4544.2Show/hide
Query:  IGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKE
        + KE L   + LKR +    +L +F+  HV RLLK D+++VL E +RQ +V L +K++ +++++ WY+PD+F Y+D+++ LAR+K++D+  ++WE ++KE
Subjt:  IGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKE

Query:  NLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEI
         +  D  T+ +++RGFL    P +AM +Y +M++SPD P  LPFR++LKGL+P+P LR +VK DF E+FP   VYDPPE+I
Subjt:  NLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEI

Q76C99 Protein Rf1, mitochondrial2.5e-0832.5Show/hide
Query:  PDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILL
        PDV  Y  +I AL +++ MD AME+  +M K  + PD  TY  ++ G+   G P +A+   + M+     PD + + +L+
Subjt:  PDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILL

Q9FKC3 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic1.0e-0936Show/hide
Query:  AVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL
        A++VF L+++Q WYKP+V +Y  LIV L + KQ + A EL++ M  E    + + YT ++  + + G    A  + E MK S +  PD   + IL+K  L
Subjt:  AVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL

Q9FMQ1 Pentatricopeptide repeat-containing protein At5g12100, mitochondrial6.6e-0934.31Show/hide
Query:  EVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLK
        +V   +++F  ++    Y P VF+Y  LI  L + K+M+DA +L++ M    L P   TY  +I G+ K G+P  +  + E MK     P  + F  LLK
Subjt:  EVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLK

Query:  GL
        GL
Subjt:  GL

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic4.6e-9568.7Show/hide
Query:  KLPICYSVFLRGLMRRP-IRDIPLPVKSTVAGFQPDSSRPLSGF-RLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLD
        K P   S+F + + R P I  I            P   +P + F   +HDGRPRGPLWR +K IGKEALFVI GLKR KED+EKL KF+K HV RLLKLD
Subjt:  KLPICYSVFLRGLMRRP-IRDIPLPVKSTVAGFQPDSSRPLSGF-RLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLD

Query:  MIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPD
        M+AV+GELERQEE ALA+K+F +IQKQEWY+PDVF+YKDLIV+LA+SK+MD+AM LWE M+KENLFPDSQTYTEVIRGFL+ G P+DAMN+YEDM KSPD
Subjt:  MIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPD

Query:  PPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFG
        PP+ELPFR+LLKGLLPHPLLRN+VK+DFEE+FP++H YDPPEEIFG
Subjt:  PPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFG

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein4.1e-4644.2Show/hide
Query:  IGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKE
        + KE L   + LKR +    +L +F+  HV RLLK D+++VL E +RQ +V L +K++ +++++ WY+PD+F Y+D+++ LAR+K++D+  ++WE ++KE
Subjt:  IGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKE

Query:  NLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEI
         +  D  T+ +++RGFL    P +AM +Y +M++SPD P  LPFR++LKGL+P+P LR +VK DF E+FP   VYDPPE+I
Subjt:  NLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEI

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein3.3e-9668.7Show/hide
Query:  KLPICYSVFLRGLMRRP-IRDIPLPVKSTVAGFQPDSSRPLSGF-RLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLD
        K P   S+F + + R P I  I            P   +P + F   +HDGRPRGPLWR +K IGKEALFVI GLKR KED+EKL KF+K HV RLLKLD
Subjt:  KLPICYSVFLRGLMRRP-IRDIPLPVKSTVAGFQPDSSRPLSGF-RLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLD

Query:  MIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPD
        M+AV+GELERQEE ALA+K+F +IQKQEWY+PDVF+YKDLIV+LA+SK+MD+AM LWE M+KENLFPDSQTYTEVIRGFL+ G P+DAMN+YEDM KSPD
Subjt:  MIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPD

Query:  PPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFG
        PP+ELPFR+LLKGLLPHPLLRN+VK+DFEE+FP++H YDPPEEIFG
Subjt:  PPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFG

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain1.7e-1532.77Show/hide
Query:  RGPLWRSRKAIGKEALFVIQGLKR---------------FKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYK
        R PL R R  +  EA+  +Q LKR                      L + +     RLLK DM+AVL EL RQ E +LA+KVF  I+K+ WYKP V +Y 
Subjt:  RGPLWRSRKAIGKEALFVIQGLKR---------------FKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYK

Query:  DLIVALARSKQMDDAMELWESMRKE-NLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGL
        D+I  +A +  M++   L+ +M+ E  L  + + +  ++   L +      M+ Y  M+     PD   FR+L+ GL
Subjt:  DLIVALARSKQMDDAMELWESMRKE-NLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGL

AT5G12100.1 pentatricopeptide (PPR) repeat-containing protein4.7e-1034.31Show/hide
Query:  EVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLK
        +V   +++F  ++    Y P VF+Y  LI  L + K+M+DA +L++ M    L P   TY  +I G+ K G+P  +  + E MK     P  + F  LLK
Subjt:  EVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLK

Query:  GL
        GL
Subjt:  GL

AT5G48730.1 Pentatricopeptide repeat (PPR) superfamily protein7.2e-1136Show/hide
Query:  AVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL
        A++VF L+++Q WYKP+V +Y  LIV L + KQ + A EL++ M  E    + + YT ++  + + G    A  + E MK S +  PD   + IL+K  L
Subjt:  AVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGCGGTGGTTTTCCAAGTTGAAGTTACCCATTTGTTATTCGGTATTCCTACGAGGTCTAATGAGGAGACCCATTAGAGATATCCCATTACCAGTAAAATCGAC
GGTTGCCGGATTTCAGCCGGATTCCAGCCGACCCTTAAGCGGATTCCGGCTATATCACGACGGGAGGCCGCGGGGACCCCTTTGGAGAAGCCGGAAAGCAATTGGGAAAG
AAGCGCTTTTCGTTATTCAGGGATTGAAGAGATTCAAGGAAGATGAAGAGAAGCTCCAGAAGTTCATGAAATGTCATGTTTTGAGGCTCTTGAAATTGGACATGATTGCT
GTGCTTGGTGAACTTGAGCGGCAGGAAGAGGTTGCTTTAGCCGTCAAGGTATTTCGGTTGATTCAAAAGCAAGAATGGTACAAGCCCGATGTTTTTCTCTACAAAGACTT
GATTGTTGCATTAGCTAGAAGTAAACAGATGGATGATGCAATGGAATTATGGGAAAGCATGAGAAAGGAGAATTTATTCCCTGATTCTCAAACGTACACCGAAGTCATCA
GAGGCTTCTTGAAATATGGATCTCCTTCTGATGCAATGAACATATATGAAGATATGAAGAAGTCTCCTGATCCACCAGATGAGTTGCCATTTAGAATTTTGTTGAAAGGA
CTTTTGCCACACCCCCTTTTGAGAAACAGAGTGAAGCAAGATTTCGAGGAGATCTTTCCTGACCAGCACGTGTACGATCCCCCGGAAGAGATATTCGGCCTACGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGCGGTGGTTTTCCAAGTTGAAGTTACCCATTTGTTATTCGGTATTCCTACGAGGTCTAATGAGGAGACCCATTAGAGATATCCCATTACCAGTAAAATCGAC
GGTTGCCGGATTTCAGCCGGATTCCAGCCGACCCTTAAGCGGATTCCGGCTATATCACGACGGGAGGCCGCGGGGACCCCTTTGGAGAAGCCGGAAAGCAATTGGGAAAG
AAGCGCTTTTCGTTATTCAGGGATTGAAGAGATTCAAGGAAGATGAAGAGAAGCTCCAGAAGTTCATGAAATGTCATGTTTTGAGGCTCTTGAAATTGGACATGATTGCT
GTGCTTGGTGAACTTGAGCGGCAGGAAGAGGTTGCTTTAGCCGTCAAGGTATTTCGGTTGATTCAAAAGCAAGAATGGTACAAGCCCGATGTTTTTCTCTACAAAGACTT
GATTGTTGCATTAGCTAGAAGTAAACAGATGGATGATGCAATGGAATTATGGGAAAGCATGAGAAAGGAGAATTTATTCCCTGATTCTCAAACGTACACCGAAGTCATCA
GAGGCTTCTTGAAATATGGATCTCCTTCTGATGCAATGAACATATATGAAGATATGAAGAAGTCTCCTGATCCACCAGATGAGTTGCCATTTAGAATTTTGTTGAAAGGA
CTTTTGCCACACCCCCTTTTGAGAAACAGAGTGAAGCAAGATTTCGAGGAGATCTTTCCTGACCAGCACGTGTACGATCCCCCGGAAGAGATATTCGGCCTACGCTGA
Protein sequenceShow/hide protein sequence
MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIA
VLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKG
LLPHPLLRNRVKQDFEEIFPDQHVYDPPEEIFGLR