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Carg20665 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20665
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr13:749234..750456
RNA-Seq ExpressionCarg20665
SyntenyCarg20665
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583436.1 hypothetical protein SDJN03_19368, partial [Cucurbita argyrosperma subsp. sororia]1.9e-7898.71Show/hide
Query:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPEIRHGLDLELGDEQ-EEEEEEVMGIYDLAGQPRFLFTIKEE
        MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPEIRHGLDLELGD+Q EEEEEEVMGIYDLAGQPRFLFTIKEE
Subjt:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPEIRHGLDLELGDEQ-EEEEEEVMGIYDLAGQPRFLFTIKEE

Query:  SNEDLESEESRTRRLSDIITAIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPL
        SNEDLESEESRTRRLSDIITAIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPL
Subjt:  SNEDLESEESRTRRLSDIITAIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPL

KAG7019199.1 hypothetical protein SDJN02_18157, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-88100Show/hide
Query:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPEIRHGLDLELGDEQEEEEEEVMGIYDLAGQPRFLFTIKEES
        MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPEIRHGLDLELGDEQEEEEEEVMGIYDLAGQPRFLFTIKEES
Subjt:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPEIRHGLDLELGDEQEEEEEEVMGIYDLAGQPRFLFTIKEES

Query:  NEDLESEESRTRRLSDIITAIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPLFESSPPPNDILAL
        NEDLESEESRTRRLSDIITAIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPLFESSPPPNDILAL
Subjt:  NEDLESEESRTRRLSDIITAIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPLFESSPPPNDILAL

XP_022970569.1 uncharacterized protein LOC111469506 [Cucurbita maxima]1.0e-6886.9Show/hide
Query:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPEIRHGLDLELGDEQ---EEEEEEVMGIYDLAGQPRFLFTIK
        MASF  LNIGLAVVLGFL MGIIAELYYLLCRKKKIINTTQVED     DQTK T NPPEIRHGL+LEL DEQ   EE EEEVMGIY+LAGQPRFLFTI 
Subjt:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPEIRHGLDLELGDEQ---EEEEEEVMGIYDLAGQPRFLFTIK

Query:  EESNEDLESEESRTRRLSDIITAIETPYFTPMASPPLKAS----PPLSCLDSYKLHGFNPLFESSPPP
        EESNEDLESEESRTRRLSDIITAIETPYFTPMASPPLKAS    PPLSCLDSYKLHGFNPLFESSPPP
Subjt:  EESNEDLESEESRTRRLSDIITAIETPYFTPMASPPLKAS----PPLSCLDSYKLHGFNPLFESSPPP

XP_023520140.1 uncharacterized protein LOC111783445 [Cucurbita pepo subsp. pepo]7.4e-7589.53Show/hide
Query:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVE--DGDGDGDQTKFTRNPPEIRHGLDLELGDEQEEE----EEEVMGIYDLAGQPRFLF
        MASF  LNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVE  DGDGDGD  KFTRNPPEIRHGLD+ELGDEQEEE    EEEVMGIY+LAGQPRFLF
Subjt:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVE--DGDGDGDQTKFTRNPPEIRHGLDLELGDEQEEE----EEEVMGIYDLAGQPRFLF

Query:  TIKEESNEDLESEESRTRRLSDIITAIETPYFTPMASPPLKAS-----PPLSCLDSYKLHGFNPLFESSPPP
        TIKEESNEDLESEESRTRRLSDIITAIETPYFTPMASPPLKAS     PPL CLDSYKLHGFNPLFESSPPP
Subjt:  TIKEESNEDLESEESRTRRLSDIITAIETPYFTPMASPPLKAS-----PPLSCLDSYKLHGFNPLFESSPPP

XP_023523159.1 uncharacterized protein LOC111787432 [Cucurbita pepo subsp. pepo]5.2e-4457.36Show/hide
Query:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDG------------DGDGDQTKFTRNPPEIRHGLDLELG----------------DE
        MASF WL IGL + LGFL +GI+AELYYLL R  K INTT+V+                     + TRNP E RHGLDLE G                DE
Subjt:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDG------------DGDGDQTKFTRNPPEIRHGLDLELG----------------DE

Query:  QEEEEEEVMGIYDLAGQPRFLFTIKEESNEDLESEE-----------SRTRRLSDIITAIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPLFESS
         EEE+ E+M IY+LAGQPRFLFTIKEE+ EDLESE+           SR R LSDIITAIETP+FTP+ASPPLKAS PL  LDSYKLH FNPLFESS
Subjt:  QEEEEEEVMGIYDLAGQPRFLFTIKEESNEDLESEE-----------SRTRRLSDIITAIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPLFESS

TrEMBL top hitse value%identityAlignment
A0A1S3C577 uncharacterized protein LOC1034971682.4e-4256.99Show/hide
Query:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTK---------FTRNPPEIRHGLDLELG-----------------DEQE
        MAS  WL IGL +VLGFL +GI+ ELYYLLCRK K IN T   + D     TK          T+NPPE R G D ELG                 DE+ 
Subjt:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTK---------FTRNPPEIRHGLDLELG-----------------DEQE

Query:  EEEEEVMGIYDLAGQPRFLFTIKEESNEDLESEE------SRTRRLSDIITAIETPYFTPMASPPLKASPPLSC-LDS--YKLHGFNPLFESS
        E++ E+ GIY+LAGQPRFLFTI EE+ EDLESE+      SR R LSDII AIETP+FTPMASPPLKAS PLS  L+S  YK+HGFNPLFESS
Subjt:  EEEEEVMGIYDLAGQPRFLFTIKEESNEDLESEE------SRTRRLSDIITAIETPYFTPMASPPLKASPPLSC-LDS--YKLHGFNPLFESS

A0A5D3DEB1 Uncharacterized protein2.4e-4256.99Show/hide
Query:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTK---------FTRNPPEIRHGLDLELG-----------------DEQE
        MAS  WL IGL +VLGFL +GI+ ELYYLLCRK K IN T   + D     TK          T+NPPE R G D ELG                 DE+ 
Subjt:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTK---------FTRNPPEIRHGLDLELG-----------------DEQE

Query:  EEEEEVMGIYDLAGQPRFLFTIKEESNEDLESEE------SRTRRLSDIITAIETPYFTPMASPPLKASPPLSC-LDS--YKLHGFNPLFESS
        E++ E+ GIY+LAGQPRFLFTI EE+ EDLESE+      SR R LSDII AIETP+FTPMASPPLKAS PLS  L+S  YK+HGFNPLFESS
Subjt:  EEEEEVMGIYDLAGQPRFLFTIKEESNEDLESEE------SRTRRLSDIITAIETPYFTPMASPPLKASPPLSC-LDS--YKLHGFNPLFESS

A0A6J1G9H1 uncharacterized protein LOC1114521877.3e-4457.36Show/hide
Query:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDG------------DGDGDQTKFTRNPPEIRHGLDLELG----------------DE
        MASF WL IGL + LGFL +GI+AELYYLL R  K INTT V+                     + TRNP E RHGLDLE G                DE
Subjt:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDG------------DGDGDQTKFTRNPPEIRHGLDLELG----------------DE

Query:  QEEEEEEVMGIYDLAGQPRFLFTIKEESNEDLESEE-----------SRTRRLSDIITAIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPLFESS
         EEE+ E+M IY+LAGQPRFLFTIKEE+ EDLESE+           SR R LSDIITAIETP+FTP+ASPPLKAS PL  LDSYKLH FNPLFESS
Subjt:  QEEEEEEVMGIYDLAGQPRFLFTIKEESNEDLESEE-----------SRTRRLSDIITAIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPLFESS

A0A6J1I5Z4 uncharacterized protein LOC1114695065.0e-6986.9Show/hide
Query:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPEIRHGLDLELGDEQ---EEEEEEVMGIYDLAGQPRFLFTIK
        MASF  LNIGLAVVLGFL MGIIAELYYLLCRKKKIINTTQVED     DQTK T NPPEIRHGL+LEL DEQ   EE EEEVMGIY+LAGQPRFLFTI 
Subjt:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPEIRHGLDLELGDEQ---EEEEEEVMGIYDLAGQPRFLFTIK

Query:  EESNEDLESEESRTRRLSDIITAIETPYFTPMASPPLKAS----PPLSCLDSYKLHGFNPLFESSPPP
        EESNEDLESEESRTRRLSDIITAIETPYFTPMASPPLKAS    PPLSCLDSYKLHGFNPLFESSPPP
Subjt:  EESNEDLESEESRTRRLSDIITAIETPYFTPMASPPLKAS----PPLSCLDSYKLHGFNPLFESSPPP

A0A6J1KBC0 uncharacterized protein LOC1114927464.7e-4355.84Show/hide
Query:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDG------------DGDGDQTKFTRNPPEIRHGLDLELG----------------DE
        M SF WL IGL + LGFL +GI+AELYYLL R  + INTT++E                     + TRNP E RHGLDLE G                DE
Subjt:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDG------------DGDGDQTKFTRNPPEIRHGLDLELG----------------DE

Query:  QEEEEEEVMGIYDLAGQPRFLFTIKEESNEDLESEE-----------SRTRRLSDIITAIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPLFESS
         E+E+ E+M IY+LAGQPRFLFTIKEE+ EDLESE+           SR R LSDIITAIETP+FTP+ASPPLKAS PL  LDSYKLH FNPLFESS
Subjt:  QEEEEEEVMGIYDLAGQPRFLFTIKEESNEDLESEE-----------SRTRRLSDIITAIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPLFESS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G39560.1 Putative membrane lipoprotein2.2e-0831.38Show/hide
Query:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGD---------------GDQTKFTRNPPEIRHGLDLELGDEQEEEEEEVMGIYD
        M S   + + L++V G L++ ++AELYYLL  KK+  +TT+  D   D                  T  + + P      + +  D Q++      G  +
Subjt:  MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGD---------------GDQTKFTRNPPEIRHGLDLELGDEQEEEEEEVMGIYD

Query:  LAGQ---PRFLFTIKEESNEDLESEE---SRTRRLSDIITAIET-----PYFTPMASPPLKASPPLSCLDSYKLHG----FNPLFESS
        + G    PRFLFTI EE+ E++ESE+   ++ + L+D+   +E+     PY TP ASP L  +PPL+ L     +G     + LFESS
Subjt:  LAGQ---PRFLFTIKEESNEDLESEE---SRTRRLSDIITAIET-----PYFTPMASPPLKASPPLSCLDSYKLHG----FNPLFESS

AT5G59350.1 unknown protein1.5e-1734.17Show/hide
Query:  MASFRWLNIGLAVVLGFLIMGIIAELYYLL-CR--KKKIIN------------------------------TTQVEDGDGDGDQTKFTRNPPEIRHGLDL
        M +   L IGL+++ GFL++ ++ E+YYLL C+  KK++I+                              + Q  +G  +G+ +      P++  GL  
Subjt:  MASFRWLNIGLAVVLGFLIMGIIAELYYLL-CR--KKKIIN------------------------------TTQVEDGDGDGDQTKFTRNPPEIRHGLDL

Query:  ELGDEQEEEEEEVMGIYDLAGQPRFLFTIKEESNEDLESEE---------SRTRRLSDIITAIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPLFES
         L       E E+M +++     RFLFTI EE+  DLESE+         SR R LSD+     TP FTP+ASP   +SP    L+SY  HGFNPLFES
Subjt:  ELGDEQEEEEEEVMGIYDLAGQPRFLFTIKEESNEDLESEE---------SRTRRLSDIITAIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPLFES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTTTCAGGTGGCTGAATATTGGGTTAGCCGTAGTTTTGGGGTTCCTCATAATGGGCATAATTGCAGAGCTTTACTATCTTCTATGCCGGAAGAAGAAAATAAT
CAATACTACACAGGTTGAAGACGGCGACGGCGACGGCGACCAAACTAAATTCACCAGAAACCCACCTGAGATCCGCCATGGATTGGACCTTGAGCTCGGCGACGAACAAG
AAGAAGAAGAAGAAGAGGTGATGGGGATTTACGATCTGGCAGGGCAACCGAGATTTTTGTTCACAATCAAGGAAGAATCAAACGAAGATTTGGAATCAGAAGAATCAAGA
ACCAGAAGGTTGAGTGACATAATTACAGCAATTGAAACTCCATATTTCACTCCCATGGCGTCTCCGCCATTGAAGGCTTCTCCTCCTCTCAGCTGTTTAGATTCGTATAA
ACTGCATGGGTTCAATCCCCTGTTTGAATCTTCGCCTCCTCCAAATGATATTCTTGCTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCTTTCAGGTGGCTGAATATTGGGTTAGCCGTAGTTTTGGGGTTCCTCATAATGGGCATAATTGCAGAGCTTTACTATCTTCTATGCCGGAAGAAGAAAATAAT
CAATACTACACAGGTTGAAGACGGCGACGGCGACGGCGACCAAACTAAATTCACCAGAAACCCACCTGAGATCCGCCATGGATTGGACCTTGAGCTCGGCGACGAACAAG
AAGAAGAAGAAGAAGAGGTGATGGGGATTTACGATCTGGCAGGGCAACCGAGATTTTTGTTCACAATCAAGGAAGAATCAAACGAAGATTTGGAATCAGAAGAATCAAGA
ACCAGAAGGTTGAGTGACATAATTACAGCAATTGAAACTCCATATTTCACTCCCATGGCGTCTCCGCCATTGAAGGCTTCTCCTCCTCTCAGCTGTTTAGATTCGTATAA
ACTGCATGGGTTCAATCCCCTGTTTGAATCTTCGCCTCCTCCAAATGATATTCTTGCTTTATAA
Protein sequenceShow/hide protein sequence
MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPEIRHGLDLELGDEQEEEEEEVMGIYDLAGQPRFLFTIKEESNEDLESEESR
TRRLSDIITAIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPLFESSPPPNDILAL