CuGenDBv2

Gene ID	Carg20684
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ATP synthase subunit d, mitochondrial
Genome location	Carg_Chr18:9128114..9130729
RNA-Seq Expression	Carg20684
Synteny	Carg20684
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0000274 - mitochondrial proton-transporting ATP synthase, stator stalk (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function) GO:0016787 - hydrolase activity (molecular function)
InterPro domains	IPR008689 - ATP synthase, F0 complex, subunit D, mitochondrial IPR036228 - ATP synthase, F0 complex, subunit D superfamily, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004142418.1 ATP synthase subunit d, mitochondrial [Cucumis sativus]

2.6e-83

95.24

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Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGT+KKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAE KSLKESERLEKEI EVQE+KKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_022945159.1 ATP synthase subunit d, mitochondrial [Cucurbita moschata]

4.2e-86

100

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Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_022956748.1 ATP synthase subunit d, mitochondrial-like [Cucurbita moschata]

7.5e-83

95.83

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Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGTVKKV D  FKASKNIDWDGMAKLLVSDEARKEFS+LRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIG RLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDSLLVELKEAE KSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_022966719.1 ATP synthase subunit d, mitochondrial [Cucurbita maxima]

2.1e-85

98.81

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Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_023541261.1 ATP synthase subunit d, mitochondrial [Cucurbita pepo subsp. pepo]

3.6e-85

98.21

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Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAEVKSLKESERLEKEIVEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRL4 ATP synthase subunit d, mitochondrial

1.2e-83

95.24

Show/hide

Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGT+KKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAE KSLKESERLEKEI EVQE+KKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1CDD8 ATP synthase subunit d, mitochondrial

3.6e-83

94.64

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Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEF++LRRAF+EVNS LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAE KSLKESERLEKE+VEVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1G072 ATP synthase subunit d, mitochondrial

2.0e-86

100

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Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1GY12 ATP synthase subunit d, mitochondrial

3.6e-83

95.83

Show/hide

Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGTVKKV D  FKASKNIDWDGMAKLLVSDEARKEFS+LRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIG RLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDSLLVELKEAE KSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1HUL8 ATP synthase subunit d, mitochondrial

1.0e-85

98.81

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Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

SwissProt top hits

e value

%identity

Alignment

Q9FT52 ATP synthase subunit d, mitochondrial

6.0e-75

81.55

Show/hide

Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSG  KK+ DVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYDSIE+PK+VD VTP+YK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAE KSLKESERLEKEI +VQE+ KK+STMTADEYFEKHPEL+KKFDDEIRND WGY
Subjt:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

Arabidopsis top hits

e value

%identity

Alignment

AT3G52300.1 ATP synthase D chain, mitochondrial

4.2e-76

81.55

Show/hide

Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSG  KK+ DVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYDSIE+PK+VD VTP+YK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAE KSLKESERLEKEI +VQE+ KK+STMTADEYFEKHPEL+KKFDDEIRND WGY
Subjt:  PKFDSLLVELKEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

AT3G52300.2 ATP synthase D chain, mitochondrial

3.5e-46

76.85

Show/hide

Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK
        MSG  KK+ DVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYDSIE+PK+VD VTP+YK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYK

Query:  PKFDSLLV
        PKFD+L++
Subjt:  PKFDSLLV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGCGGTACCGTCAAGAAAGTGACCGATGTTGCCTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAGGCTCGCAAGGAGTT
CTCATCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCTGCTCTCCAGACCAAGTTCAGCCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGATCCC
GCTTGGTGGACATGTACAAAGAGGCTTATGACAGCATTGAGGTCCCCAAATTTGTAGACACAGTGACTCCGCAGTACAAACCTAAATTTGATTCGTTGCTGGTAGAATTG
AAGGAAGCTGAAGTGAAATCCCTAAAGGAGTCCGAGCGGTTGGAGAAGGAGATTGTTGAAGTTCAAGAATTGAAGAAAAAAATCAGCACCATGACTGCTGACGAGTACTT
CGAGAAGCATCCTGAGCTGAGGAAGAAATTCGACGATGAAATCCGAAACGACTACTGGGGCTATTGA

mRNA sequence

Show/hide mRNA sequence

TAGAAGAATAGACGCCGATATCTGTGTTTTGAGCTCTCAACGAATTCCCCTCTTGCAGTTCCCATTGATTGTCTTTCCTCTGCGAAATCCGGCGAAAAAATGAGCGGTAC
CGTCAAGAAAGTGACCGATGTTGCCTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAGGCTCGCAAGGAGTTCTCATCCCTTC
GCCGAGCCTTCGAGGAGGTTAACTCTGCTCTCCAGACCAAGTTCAGCCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGATCCCGCTTGGTGGAC
ATGTACAAAGAGGCTTATGACAGCATTGAGGTCCCCAAATTTGTAGACACAGTGACTCCGCAGTACAAACCTAAATTTGATTCGTTGCTGGTAGAATTGAAGGAAGCTGA
AGTGAAATCCCTAAAGGAGTCCGAGCGGTTGGAGAAGGAGATTGTTGAAGTTCAAGAATTGAAGAAAAAAATCAGCACCATGACTGCTGACGAGTACTTCGAGAAGCATC
CTGAGCTGAGGAAGAAATTCGACGATGAAATCCGAAACGACTACTGGGGCTATTGACCGCAAATTACTGGTTGAAGCGCCAAAGTTTCACAATTTAATTTCGTAAATCTT
CCGGGTCTTGTTTTGCTGCAGCTGTTTGGTCAGTAATAAAACAAACAAGATAGTTCTCCAATTTGGGTGCATTTGCTTTCCAAATCACGTTGACAAAATTGATTAGAGAG
ACTGAGATTTTCCTTGAGATGATGCTGTGAGAGTTCCAAATCACTCGAGGTACATTATCATGGCAAATGCATTTTTTTTTTAATGAGATTATTGTGTTATTTCAGCAAGT
TTTCTTATCATTCTGATATTAATAAAGAGATCTTCTTCGTAGTGGCTCCGTTCC

Protein sequence

Show/hide protein sequence

MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDSLLVEL
KEAEVKSLKESERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY

Carg20684 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome