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Carg20694 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20694
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr18:9208776..9211148
RNA-Seq ExpressionCarg20694
SyntenyCarg20694
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012900.1 hypothetical protein SDJN02_25653 [Cucurbita argyrosperma subsp. argyrosperma]7.3e-52100Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLEPRHE
        MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLEPRHE
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLEPRHE

Query:  QATHL
        QATHL
Subjt:  QATHL

XP_022139281.1 uncharacterized protein LOC111010237 [Momordica charantia]3.6e-3580.21Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLE
        MHLWPSTRIRDSFK AYI+KLEWN+HRMKIQK QQQQSSSKQNLLDK+Q+SDADGET+  ++ VSFG RVL+FCSE LLLLSCCYCCYCCG  + E
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLE

XP_022945676.1 uncharacterized protein LOC111449839 [Cucurbita moschata]2.8e-4395.83Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLE
        MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCG  + E
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLE

XP_022967037.1 uncharacterized protein LOC111466560 [Cucurbita maxima]4.0e-4293.75Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLE
        MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDAD ETSGKSSS+SFGHRVLEFCSEVLLLLSCCYCCYCCG  + E
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLE

XP_023541224.1 uncharacterized protein LOC111801454 [Cucurbita pepo subsp. pepo]6.4e-4091.75Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQK-HQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLE
        MHLWPSTRIRDSFKSAYIQ LEWN HRMKIQK  QQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCG  + E
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQK-HQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLE

TrEMBL top hitse value%identityAlignment
A0A0A0KRM0 Uncharacterized protein2.2e-3080.43Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSD-ADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCG
        MHLWPSTRIRDSFK AYI+KLEWN+HRMKIQKH Q QSSSKQNLLDK+++SD AD ETS  S SVSFG RVLEF SE+  LLSCCYCCYCCG
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSD-ADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCG

A0A5A7SU31 Uncharacterized protein2.0e-3182.61Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSD-ADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCG
        MHLWPSTRIRDSFK AYI+KLEWN+HRMKIQKH Q QSSSKQNLLDK+  SD ADGETS +S SVSFG RVLEF SE+L LLSCCYCCYCCG
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSD-ADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCG

A0A6J1CC78 uncharacterized protein LOC1110102371.8e-3580.21Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLE
        MHLWPSTRIRDSFK AYI+KLEWN+HRMKIQK QQQQSSSKQNLLDK+Q+SDADGET+  ++ VSFG RVL+FCSE LLLLSCCYCCYCCG  + E
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLE

A0A6J1G1K0 uncharacterized protein LOC1114498391.3e-4395.83Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLE
        MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCG  + E
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLE

A0A6J1HPM3 uncharacterized protein LOC1114665601.9e-4293.75Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLE
        MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDAD ETSGKSSS+SFGHRVLEFCSEVLLLLSCCYCCYCCG  + E
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G49015.1 Expressed protein1.5e-1038.54Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLE
        MHLWPS ++R+SFKS               QK  Q+ +S KQ+  ++Q+  D D E+   S  +S G      C +V ++LSCCYCC+CCG  + E
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLE

AT5G49015.2 Expressed protein1.5e-1038.54Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLE
        MHLWPS ++R+SFKS               QK  Q+ +S KQ+  ++Q+  D D E+   S  +S G      C +V ++LSCCYCC+CCG  + E
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCTGTGGCCATCGACGAGGATCAGAGACTCTTTCAAGAGTGCTTATATCCAAAAGCTGGAATGGAACATCCACAGAATGAAAATCCAGAAGCACCAGCAGCAGCA
ATCTTCGAGCAAACAGAACTTGTTGGATAAACAACAATCTTCTGATGCCGATGGCGAAACTTCAGGGAAATCCAGTTCAGTTTCCTTTGGTCATCGAGTTCTTGAATTCT
GCTCTGAAGTTCTCCTGCTTCTCTCCTGTTGTTATTGTTGCTATTGCTGTGGAGTATCTGTACTGGAGCCTCGTCATGAACAGGCTACACATTTGTAA
mRNA sequenceShow/hide mRNA sequence
TTTTACGGTGTTTTTTTTCTGCTTTCCCTCCCCACCTTCCTTCTCTGTTAAAGCCCCGTCGGTTCCGCGACTTTTCTTATTTCCTCCCTCCCAGCGCCGGCGATTCTCCA
CATCGTTCTTCATCTAACTCGAGAGGCAAAGATGCATCTGTGGCCATCGACGAGGATCAGAGACTCTTTCAAGAGTGCTTATATCCAAAAGCTGGAATGGAACATCCACA
GAATGAAAATCCAGAAGCACCAGCAGCAGCAATCTTCGAGCAAACAGAACTTGTTGGATAAACAACAATCTTCTGATGCCGATGGCGAAACTTCAGGGAAATCCAGTTCA
GTTTCCTTTGGTCATCGAGTTCTTGAATTCTGCTCTGAAGTTCTCCTGCTTCTCTCCTGTTGTTATTGTTGCTATTGCTGTGGAGTATCTGTACTGGAGCCTCGTCATGA
ACAGGCTACACATTTGTAA
Protein sequenceShow/hide protein sequence
MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGVSVLEPRHEQATHL