; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20724 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20724
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncyclin-dependent protein kinase inhibitor SMR1-like
Genome locationCarg_Chr18:9421600..9422025
RNA-Seq ExpressionCarg20724
SyntenyCarg20724
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573862.1 hypothetical protein SDJN03_27749, partial [Cucurbita argyrosperma subsp. sororia]5.3e-6697.16Show/hide
Query:  MSTGLDLRRTFLETVRRPGLNLPIPRPSSSAPDHSDTIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRR
        MSTGLDLRRTFLETVRRPGLNLPIPR SSSAPDHSDTIQKQSIDT  TATATATASAAISAEEEELCCRTPTSAENKIP+LLQCPPAPRKRKRPPSCRRR
Subjt:  MSTGLDLRRTFLETVRRPGLNLPIPRPSSSAPDHSDTIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRR

Query:  LMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK
        LMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK
Subjt:  LMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK

KAG7012928.1 hypothetical protein SDJN02_25681, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-69100Show/hide
Query:  MSTGLDLRRTFLETVRRPGLNLPIPRPSSSAPDHSDTIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRR
        MSTGLDLRRTFLETVRRPGLNLPIPRPSSSAPDHSDTIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRR
Subjt:  MSTGLDLRRTFLETVRRPGLNLPIPRPSSSAPDHSDTIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRR

Query:  LMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK
        LMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK
Subjt:  LMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK

XP_022945469.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata]1.1e-6090.07Show/hide
Query:  MSTGLDLRRTFLETVRRPGLNLPIPRPSSSAPDHSDTIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRR
        MSTGLDLRRTFLETVRRP LNLPIPR SSSAPDHSDTIQKQSIDTTATA          SAEEEELCCRTPTS+ENKIP+LLQCPPAPRKRKRPPSCRRR
Subjt:  MSTGLDLRRTFLETVRRPGLNLPIPRPSSSAPDHSDTIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRR

Query:  LMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK
        LMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK
Subjt:  LMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK

XP_022968197.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]8.0e-6290.78Show/hide
Query:  MSTGLDLRRTFLETVRRPGLNLPIPRPSSSAPDHSDTIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRR
        MSTGLDLRRTFLETVRRP LNLPIPRPSSSAPDHSDTIQKQSIDTTATA++ A       AEEEELCCRTPTSAENKIP+LLQCPPAPRKRKRPPSCRRR
Subjt:  MSTGLDLRRTFLETVRRPGLNLPIPRPSSSAPDHSDTIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRR

Query:  LMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK
        LMELEFVQIVNRE+IEPYLNSSFEHEDRVRKSAKRSFCECK
Subjt:  LMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK

XP_023542380.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]1.7e-5989.36Show/hide
Query:  MSTGLDLRRTFLETVRRPGLNLPIPRPSSSAPDHSDTIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRR
        MSTGLDLRRTFLETVRR  LNLPIPRPSSSAPDHSDTIQKQSIDTTATA+A A+A       E ELCCRTPTSAENKIP+LLQCPPAPRKRKRPPSCRRR
Subjt:  MSTGLDLRRTFLETVRRPGLNLPIPRPSSSAPDHSDTIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRR

Query:  LMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK
        LMELEFVQIV+REEIEPYLNSSFEHEDRVRKSAKRSFCECK
Subjt:  LMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK

TrEMBL top hitse value%identityAlignment
A0A5D3CD68 Cyclin-dependent protein kinase inhibitor SMR1-like1.1e-4066.9Show/hide
Query:  MSTGLDLRRTFLETVRRPGLNLPIPRPSSSAPDHSD----TIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPS
        MST LDLRRT LE VRRP + L IP PS++     D     IQK  ID      A            EELCCRTPTSAENKIP+++QCPPAPRKRKRPPS
Subjt:  MSTGLDLRRTFLETVRRPGLNLPIPRPSSSAPDHSD----TIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPS

Query:  CRRRLMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK
        CRRRLMELEFV+IV+R+EIEPYLN+SF+HEDRVRKSAKRSFCECK
Subjt:  CRRRLMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK

A0A6J1G121 cyclin-dependent protein kinase inhibitor SMR1-like5.6e-6190.07Show/hide
Query:  MSTGLDLRRTFLETVRRPGLNLPIPRPSSSAPDHSDTIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRR
        MSTGLDLRRTFLETVRRP LNLPIPR SSSAPDHSDTIQKQSIDTTATA          SAEEEELCCRTPTS+ENKIP+LLQCPPAPRKRKRPPSCRRR
Subjt:  MSTGLDLRRTFLETVRRPGLNLPIPRPSSSAPDHSDTIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRR

Query:  LMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK
        LMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK
Subjt:  LMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK

A0A6J1GZ63 cyclin-dependent protein kinase inhibitor SMR1-like4.9e-4167.83Show/hide
Query:  MSTGLDLRRTFLETVRRPGLNLPIPRP-SSSAPDHSDT-IQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCR
        MST LDLRRT LE VRRP + L IPRP SS A DH    IQK+ ID              I    EELCCRTPTSAENKIP +LQCPPAPRKRKRPP+CR
Subjt:  MSTGLDLRRTFLETVRRPGLNLPIPRP-SSSAPDHSDT-IQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCR

Query:  RRLMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK
        RRL+ELEFV+IV+REEIEPY  SSF+HE+RV+KSAK SFCECK
Subjt:  RRLMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK

A0A6J1HSZ5 cyclin-dependent protein kinase inhibitor SMR1-like3.9e-6290.78Show/hide
Query:  MSTGLDLRRTFLETVRRPGLNLPIPRPSSSAPDHSDTIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRR
        MSTGLDLRRTFLETVRRP LNLPIPRPSSSAPDHSDTIQKQSIDTTATA++ A       AEEEELCCRTPTSAENKIP+LLQCPPAPRKRKRPPSCRRR
Subjt:  MSTGLDLRRTFLETVRRPGLNLPIPRPSSSAPDHSDTIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRR

Query:  LMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK
        LMELEFVQIVNRE+IEPYLNSSFEHEDRVRKSAKRSFCECK
Subjt:  LMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK

A0A6J1JRA3 cyclin-dependent protein kinase inhibitor SMR1-like2.2e-4167.83Show/hide
Query:  MSTGLDLRRTFLETVRRPGLNLPIPRP-SSSAPDHSDT-IQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCR
        MST LDLRRT LE VRRP + L IPRP SS A DH    IQK+ ID              I   +EELCCRTPTSAENKIP +LQCPPAPRKRKRPP+CR
Subjt:  MSTGLDLRRTFLETVRRPGLNLPIPRP-SSSAPDHSDT-IQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCR

Query:  RRLMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK
        RRL+ELEFV+IV+REEIEPY  SSF+HE+RV+KSAK SFCECK
Subjt:  RRLMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCECK

SwissProt top hitse value%identityAlignment
Q29Q81 Cyclin-dependent protein kinase inhibitor SMR64.2e-0557.5Show/hide
Query:  EEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRRLM
        EEE C  TPT+ E KIP LL+CPPAPRKR+    CR  ++
Subjt:  EEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRRLM

Q9LPP4 Cyclin-dependent protein kinase inhibitor SMR11.7e-0634.78Show/hide
Query:  EEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPP-------------SCRRRLMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCEC
        +E++L C TPTS E+KIP+++  PP P ++ RPP             SC+R+L+      I+NREEI+ + +S + +E       +RS+  C
Subjt:  EEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPP-------------SCRRRLMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCEC

Arabidopsis top hitse value%identityAlignment
AT1G51355.1 unknown protein8.1e-0436Show/hide
Query:  LRRTFLETVRRPGLNLPIPRPSSSAPDHSDTIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRRLMELEF
        LRRT   T RR   +   P P  S   +SD     S  T+ T+TAT +  +A     E  CC   T  +++IP +L CPPAP+K+K   +C  R  ++ F
Subjt:  LRRTFLETVRRPGLNLPIPRPSSSAPDHSDTIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRRLMELEF

AT1G60783.1 unknown protein3.6e-0448.72Show/hide
Query:  TASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRK
        ++SA  + E+E+LC  TPT+   +IP+++ CPPAP+KRK
Subjt:  TASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRK

AT3G10525.1 LOSS OF GIANT CELLS FROM ORGANS1.2e-0734.78Show/hide
Query:  EEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPP-------------SCRRRLMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCEC
        +E++L C TPTS E+KIP+++  PP P ++ RPP             SC+R+L+      I+NREEI+ + +S + +E       +RS+  C
Subjt:  EEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPP-------------SCRRRLMELEFVQIVNREEIEPYLNSSFEHEDRVRKSAKRSFCEC

AT5G40460.1 unknown protein3.0e-0657.5Show/hide
Query:  EEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRRLM
        EEE C  TPT+ E KIP LL+CPPAPRKR+    CR  ++
Subjt:  EEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRRLM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACAGGCCTCGATCTCCGACGCACTTTCCTCGAAACCGTCCGCCGTCCGGGCCTCAACCTTCCAATTCCACGCCCGTCCTCATCAGCGCCCGATCACAGCGACAC
AATTCAGAAACAGAGTATCGACACCACCGCCACCGCCACCGCCACCGCCACCGCCTCCGCCGCCATCTCCGCCGAAGAAGAAGAATTATGCTGCCGCACGCCGACTTCCG
CAGAGAACAAGATTCCGTCGTTACTGCAATGTCCGCCGGCGCCGCGGAAACGGAAGAGACCTCCGAGTTGTAGAAGAAGACTAATGGAGCTTGAATTCGTGCAGATCGTG
AATAGAGAAGAGATCGAACCGTATTTGAATTCGAGTTTCGAACACGAAGACAGAGTTCGAAAATCCGCTAAACGAAGCTTCTGCGAATGTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACAGGCCTCGATCTCCGACGCACTTTCCTCGAAACCGTCCGCCGTCCGGGCCTCAACCTTCCAATTCCACGCCCGTCCTCATCAGCGCCCGATCACAGCGACAC
AATTCAGAAACAGAGTATCGACACCACCGCCACCGCCACCGCCACCGCCACCGCCTCCGCCGCCATCTCCGCCGAAGAAGAAGAATTATGCTGCCGCACGCCGACTTCCG
CAGAGAACAAGATTCCGTCGTTACTGCAATGTCCGCCGGCGCCGCGGAAACGGAAGAGACCTCCGAGTTGTAGAAGAAGACTAATGGAGCTTGAATTCGTGCAGATCGTG
AATAGAGAAGAGATCGAACCGTATTTGAATTCGAGTTTCGAACACGAAGACAGAGTTCGAAAATCCGCTAAACGAAGCTTCTGCGAATGTAAATGA
Protein sequenceShow/hide protein sequence
MSTGLDLRRTFLETVRRPGLNLPIPRPSSSAPDHSDTIQKQSIDTTATATATATASAAISAEEEELCCRTPTSAENKIPSLLQCPPAPRKRKRPPSCRRRLMELEFVQIV
NREEIEPYLNSSFEHEDRVRKSAKRSFCECK