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Carg20734 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20734
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGPI-anchored adhesin-like protein
Genome locationCarg_Chr15:10177867..10179760
RNA-Seq ExpressionCarg20734
SyntenyCarg20734
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017167.1 hypothetical protein SDJN02_22279, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-159100Show/hide
Query:  MEADWLGGSGKPMSPSAQYGGAGEKKRSLYQYDIKEQADSVSLYQTEKQLNRKLGETEQQPDIAAPGPVQGTKQQGPSEPIIEQGPKENVIDLILPTEMR
        MEADWLGGSGKPMSPSAQYGGAGEKKRSLYQYDIKEQADSVSLYQTEKQLNRKLGETEQQPDIAAPGPVQGTKQQGPSEPIIEQGPKENVIDLILPTEMR
Subjt:  MEADWLGGSGKPMSPSAQYGGAGEKKRSLYQYDIKEQADSVSLYQTEKQLNRKLGETEQQPDIAAPGPVQGTKQQGPSEPIIEQGPKENVIDLILPTEMR

Query:  RLELIRNEWVFGLVWLERRILLILLPFSSTNLRILFHFTMRPSSSSSSSSPSSQIHAANKKLRHQQQQQHHQGPRGPFRVLNGISFSPACNTASVGSDAS
        RLELIRNEWVFGLVWLERRILLILLPFSSTNLRILFHFTMRPSSSSSSSSPSSQIHAANKKLRHQQQQQHHQGPRGPFRVLNGISFSPACNTASVGSDAS
Subjt:  RLELIRNEWVFGLVWLERRILLILLPFSSTNLRILFHFTMRPSSSSSSSSPSSQIHAANKKLRHQQQQQHHQGPRGPFRVLNGISFSPACNTASVGSDAS

Query:  STSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNPKSTSHMAVPEEALFIRCPTNLKSWHLMVRSLERHGAKPPYAYTSPVLLMVLDMSFLDL
        STSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNPKSTSHMAVPEEALFIRCPTNLKSWHLMVRSLERHGAKPPYAYTSPVLLMVLDMSFLDL
Subjt:  STSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNPKSTSHMAVPEEALFIRCPTNLKSWHLMVRSLERHGAKPPYAYTSPVLLMVLDMSFLDL

KAG7017172.1 hypothetical protein SDJN02_22284, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-3892.38Show/hide
Query:  MRPSSSSSSSSPSSQIHAANKKLRHQQQQQHHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNPK
        MRP SSSSSSSPSSQIHAAN KL+   QQQHHQ PRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNPK
Subjt:  MRPSSSSSSSSPSSQIHAANKKLRHQQQQQHHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNPK

Query:  STSHM
        STSH+
Subjt:  STSHM

XP_022928860.1 uncharacterized protein LOC111435650 [Cucurbita moschata]1.3e-4291.89Show/hide
Query:  MRPSSSSSSSSPSSQIHAANKKLRH------QQQQQHHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKS
        MRPSSSSSSSSPSSQIHAANKKL+H      QQQQQ HQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKS
Subjt:  MRPSSSSSSSSPSSQIHAANKKLRH------QQQQQHHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKS

Query:  SSKNPKSTSHM
        SSKNPKSTSH+
Subjt:  SSKNPKSTSHM

XP_022969790.1 uncharacterized protein LOC111468888 [Cucurbita maxima]1.0e-4295.28Show/hide
Query:  MRPSSSSSSSSPSSQIHAANKKLRHQQQQQ-HHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNP
        MRPSSSSSSSSPSSQIHA NKKL+HQQQQQ HHQGPR PFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNP
Subjt:  MRPSSSSSSSSPSSQIHAANKKLRHQQQQQ-HHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNP

Query:  KSTSHM
        KSTSH+
Subjt:  KSTSHM

XP_023550090.1 uncharacterized protein LOC111808388 [Cucurbita pepo subsp. pepo]4.7e-4094.29Show/hide
Query:  MRPSSSSSSSSPSSQIHAANKKLRHQQQQQHHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNPK
        MRP SSSSSSSPSSQIHAANKKL+  QQQQ HQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNPK
Subjt:  MRPSSSSSSSSPSSQIHAANKKLRHQQQQQHHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNPK

Query:  STSHM
        STSH+
Subjt:  STSHM

TrEMBL top hitse value%identityAlignment
A0A0A0LHN8 Uncharacterized protein6.3e-2270.71Show/hide
Query:  SSSSSPSSQIHAANKKLRHQQQQQHHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNPKSTSHM
        +SSSSPSS     NKK + QQQQ+  QGPR PF VLN ISF  ACNT+S+GSDASSTST+APRGCLRFFL HSS+SSK  TPANKLK SSK PKS S++
Subjt:  SSSSSPSSQIHAANKKLRHQQQQQHHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNPKSTSHM

A0A1S4E1G9 uncharacterized protein LOC1034968881.9e-1860.58Show/hide
Query:  SSSSPSSQIHAANKK------LRHQQQQQHHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNPKS
        S + PS+ IH  +         + QQ+QQ  QG   PF VLN ISF  ACNT+S+GSDASSTST+APRGCLRFFL HSS+SSK  TPANKLK SSK PKS
Subjt:  SSSSPSSQIHAANKK------LRHQQQQQHHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNPKS

Query:  TSHM
         S++
Subjt:  TSHM

A0A5D3BQU9 Uncharacterized protein1.9e-1860.58Show/hide
Query:  SSSSPSSQIHAANKK------LRHQQQQQHHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNPKS
        S + PS+ IH  +         + QQ+QQ  QG   PF VLN ISF  ACNT+S+GSDASSTST+APRGCLRFFL HSS+SSK  TPANKLK SSK PKS
Subjt:  SSSSPSSQIHAANKK------LRHQQQQQHHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNPKS

Query:  TSHM
         S++
Subjt:  TSHM

A0A6J1ELH1 uncharacterized protein LOC1114356506.4e-4391.89Show/hide
Query:  MRPSSSSSSSSPSSQIHAANKKLRH------QQQQQHHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKS
        MRPSSSSSSSSPSSQIHAANKKL+H      QQQQQ HQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKS
Subjt:  MRPSSSSSSSSPSSQIHAANKKLRH------QQQQQHHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKS

Query:  SSKNPKSTSHM
        SSKNPKSTSH+
Subjt:  SSKNPKSTSHM

A0A6J1I200 uncharacterized protein LOC1114688884.9e-4395.28Show/hide
Query:  MRPSSSSSSSSPSSQIHAANKKLRHQQQQQ-HHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNP
        MRPSSSSSSSSPSSQIHA NKKL+HQQQQQ HHQGPR PFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNP
Subjt:  MRPSSSSSSSSPSSQIHAANKKLRHQQQQQ-HHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSSSSKTQTPANKLKSSSKNP

Query:  KSTSHM
        KSTSH+
Subjt:  KSTSHM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCGGATTGGTTAGGCGGAAGCGGTAAGCCAATGTCTCCAAGTGCGCAATACGGAGGAGCAGGAGAGAAGAAGAGATCTCTCTATCAATATGACATCAAAGAACA
GGCTGATTCTGTTTCGTTGTACCAGACGGAGAAGCAACTGAATAGGAAACTTGGAGAGACAGAGCAACAGCCAGATATCGCTGCTCCTGGACCGGTGCAAGGAACGAAGC
AGCAGGGCCCATCGGAACCCATCATCGAACAAGGACCGAAGGAGAACGTCATTGATCTGATTTTACCGACAGAAATGAGAAGATTAGAATTGATCCGGAATGAATGGGTG
TTTGGTTTAGTTTGGTTGGAGCGGAGAATATTGTTGATCCTCCTTCCTTTCTCCTCCACAAATCTCAGAATTCTTTTCCATTTCACCATGAGACCTTCGTCCTCTTCCTC
TTCTTCTTCGCCTTCGTCTCAAATCCACGCCGCTAACAAGAAGCTCCGGCATCAGCAGCAGCAGCAGCACCACCAGGGTCCTCGAGGCCCCTTCCGTGTTCTTAATGGCA
TTTCCTTTTCCCCCGCCTGCAACACCGCCAGCGTCGGCAGTGACGCTTCCTCCACCTCTACCGATGCTCCCAGAGGCTGTCTCAGGTTCTTTCTCTCTCATTCCTCTTCA
TCTTCTAAGACACAGACCCCTGCTAATAAGCTTAAATCATCTTCCAAAAACCCTAAATCTACTTCTCATATGGCCGTCCCGGAAGAAGCCCTGTTCATTAGGTGCCCCAC
AAACCTAAAATCTTGGCATCTGATGGTGAGGAGTTTGGAGAGGCATGGGGCCAAGCCACCTTATGCCTACACTTCTCCTGTTCTGCTAATGGTGCTGGATATGTCGTTTC
TGGATCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCGGATTGGTTAGGCGGAAGCGGTAAGCCAATGTCTCCAAGTGCGCAATACGGAGGAGCAGGAGAGAAGAAGAGATCTCTCTATCAATATGACATCAAAGAACA
GGCTGATTCTGTTTCGTTGTACCAGACGGAGAAGCAACTGAATAGGAAACTTGGAGAGACAGAGCAACAGCCAGATATCGCTGCTCCTGGACCGGTGCAAGGAACGAAGC
AGCAGGGCCCATCGGAACCCATCATCGAACAAGGACCGAAGGAGAACGTCATTGATCTGATTTTACCGACAGAAATGAGAAGATTAGAATTGATCCGGAATGAATGGGTG
TTTGGTTTAGTTTGGTTGGAGCGGAGAATATTGTTGATCCTCCTTCCTTTCTCCTCCACAAATCTCAGAATTCTTTTCCATTTCACCATGAGACCTTCGTCCTCTTCCTC
TTCTTCTTCGCCTTCGTCTCAAATCCACGCCGCTAACAAGAAGCTCCGGCATCAGCAGCAGCAGCAGCACCACCAGGGTCCTCGAGGCCCCTTCCGTGTTCTTAATGGCA
TTTCCTTTTCCCCCGCCTGCAACACCGCCAGCGTCGGCAGTGACGCTTCCTCCACCTCTACCGATGCTCCCAGAGGCTGTCTCAGGTTCTTTCTCTCTCATTCCTCTTCA
TCTTCTAAGACACAGACCCCTGCTAATAAGCTTAAATCATCTTCCAAAAACCCTAAATCTACTTCTCATATGGCCGTCCCGGAAGAAGCCCTGTTCATTAGGTGCCCCAC
AAACCTAAAATCTTGGCATCTGATGGTGAGGAGTTTGGAGAGGCATGGGGCCAAGCCACCTTATGCCTACACTTCTCCTGTTCTGCTAATGGTGCTGGATATGTCGTTTC
TGGATCTCTGA
Protein sequenceShow/hide protein sequence
MEADWLGGSGKPMSPSAQYGGAGEKKRSLYQYDIKEQADSVSLYQTEKQLNRKLGETEQQPDIAAPGPVQGTKQQGPSEPIIEQGPKENVIDLILPTEMRRLELIRNEWV
FGLVWLERRILLILLPFSSTNLRILFHFTMRPSSSSSSSSPSSQIHAANKKLRHQQQQQHHQGPRGPFRVLNGISFSPACNTASVGSDASSTSTDAPRGCLRFFLSHSSS
SSKTQTPANKLKSSSKNPKSTSHMAVPEEALFIRCPTNLKSWHLMVRSLERHGAKPPYAYTSPVLLMVLDMSFLDL