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Carg20735 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20735
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr15:10177236..10177679
RNA-Seq ExpressionCarg20735
SyntenyCarg20735
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017166.1 hypothetical protein SDJN02_22278, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-80100Show/hide
Query:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV
        MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV
Subjt:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV

Query:  NGEAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
        NGEAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
Subjt:  NGEAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
KAG7017172.1 hypothetical protein SDJN02_22284, partial [Cucurbita argyrosperma subsp. argyrosperma]8.3e-7897.96Show/hide
Query:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV
        MDLNQFQKLLEDQAFRNSNSSCENLS SQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSI+LSDILKKTPLKHNDCEADPIICNSSCSSRLLV
Subjt:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV

Query:  NGEAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
        N EAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
Subjt:  NGEAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
XP_022928860.1 uncharacterized protein LOC111435650 [Cucurbita moschata]4.4e-7999.32Show/hide
Query:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV
        MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV
Subjt:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV

Query:  NGEAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
        N EAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
Subjt:  NGEAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
XP_022969790.1 uncharacterized protein LOC111468888 [Cucurbita maxima]6.3e-7897.96Show/hide
Query:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV
        MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSD+EEENADTCSI+LSDILKKTPLKHNDCEADPIICNSSCSSRLLV
Subjt:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV

Query:  NGEAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
        N EAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
Subjt:  NGEAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
XP_023550090.1 uncharacterized protein LOC111808388 [Cucurbita pepo subsp. pepo]3.7e-7897.96Show/hide
Query:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV
        MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSI+LSDILKKTPLKHNDCEADPIICNSSCSSRLLV
Subjt:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV

Query:  NGEAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
        N EAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCY+NGLFDC
Subjt:  NGEAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
TrEMBL top hitse value%identityAlignment
A0A0A0LHN8 Uncharacterized protein1.7e-5776.16Show/hide
Query:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV
        MDL+QFQK+LEDQAFRN+NSSCE+L +S+MRVSWREGLMSR+YEMDEFD+CRCLS DEEEN D+CSI+LSDI+ KTPL+H DCE DPI+ NSSCS  LLV
Subjt:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV

Query:  NGEAEEYEK-----SNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFD
        N EAEEY K     S++V C CAESISTDGGGL+ASGDSDW+LCY+NGLFD
Subjt:  NGEAEEYEK-----SNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFD
A0A1S4E1G9 uncharacterized protein LOC1034968889.0e-5474.17Show/hide
Query:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV
        MDL+QFQK+LEDQAFRN+NSSCE+L +S+MRVSWREGLMSR+YEMDEFD+CRCLS DEEEN D+CSI+LSDIL KTPL+  D E DPI+  S CS  LLV
Subjt:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV

Query:  NGEAEEYEK-----SNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFD
        N EAEEY K     S++V C CAESISTDGGGL+ASGDSDW+LCY+NGLFD
Subjt:  NGEAEEYEK-----SNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFD
A0A5D3BQU9 Uncharacterized protein9.0e-5474.17Show/hide
Query:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV
        MDL+QFQK+LEDQAFRN+NSSCE+L +S+MRVSWREGLMSR+YEMDEFD+CRCLS DEEEN D+CSI+LSDIL KTPL+  D E DPI+  S CS  LLV
Subjt:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV

Query:  NGEAEEYEK-----SNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFD
        N EAEEY K     S++V C CAESISTDGGGL+ASGDSDW+LCY+NGLFD
Subjt:  NGEAEEYEK-----SNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFD
A0A6J1ELH1 uncharacterized protein LOC1114356502.1e-7999.32Show/hide
Query:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV
        MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV
Subjt:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV

Query:  NGEAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
        N EAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
Subjt:  NGEAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
A0A6J1I200 uncharacterized protein LOC1114688883.1e-7897.96Show/hide
Query:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV
        MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSD+EEENADTCSI+LSDILKKTPLKHNDCEADPIICNSSCSSRLLV
Subjt:  MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLV

Query:  NGEAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
        N EAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
Subjt:  NGEAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G43990.1 unknown protein1.2e-0571.43Show/hide
Query:  CCCAESISTDGGGLMASGDSDWHLCYKN
        C  AESISTDGGGL+ S DS+W  CYKN
Subjt:  CCCAESISTDGGGLMASGDSDWHLCYKN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTTAACCAATTTCAAAAGCTTCTTGAAGATCAGGCTTTTAGGAATAGCAATTCTTCGTGTGAGAATTTGTCAAAATCCCAAATGAGAGTATCATGGAGGGAAGG
GTTAATGAGCCGGATCTACGAGATGGATGAGTTCGATAGTTGTCGTTGCCTATCAGACGACGAAGAAGAGAATGCTGACACTTGCAGCATTAACTTGTCAGATATCCTTA
AGAAGACTCCTCTGAAACATAATGATTGTGAGGCTGATCCTATAATTTGCAACAGTTCTTGTTCTTCTCGATTATTAGTGAATGGGGAAGCCGAAGAATATGAGAAAAGT
AATGAAGTAGCATGTTGTTGTGCGGAATCCATTAGCACGGATGGAGGTGGGTTGATGGCATCAGGGGACTCAGATTGGCATTTATGCTACAAAAATGGATTGTTTGATTG
CTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCTTAACCAATTTCAAAAGCTTCTTGAAGATCAGGCTTTTAGGAATAGCAATTCTTCGTGTGAGAATTTGTCAAAATCCCAAATGAGAGTATCATGGAGGGAAGG
GTTAATGAGCCGGATCTACGAGATGGATGAGTTCGATAGTTGTCGTTGCCTATCAGACGACGAAGAAGAGAATGCTGACACTTGCAGCATTAACTTGTCAGATATCCTTA
AGAAGACTCCTCTGAAACATAATGATTGTGAGGCTGATCCTATAATTTGCAACAGTTCTTGTTCTTCTCGATTATTAGTGAATGGGGAAGCCGAAGAATATGAGAAAAGT
AATGAAGTAGCATGTTGTTGTGCGGAATCCATTAGCACGGATGGAGGTGGGTTGATGGCATCAGGGGACTCAGATTGGCATTTATGCTACAAAAATGGATTGTTTGATTG
CTAA
Protein sequenceShow/hide protein sequence
MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLVNGEAEEYEKS
NEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC