; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20821 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20821
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionU6 snRNA phosphodiesterase
Genome locationCarg_Chr15:9590606..9593916
RNA-Seq ExpressionCarg20821
SyntenyCarg20821
Gene Ontology termsGO:0034477 - U6 snRNA 3'-end processing (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:1990838 - poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends (molecular function)
InterPro domainsIPR027521 - U6 snRNA phosphodiesterase Usb1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579639.1 U6 snRNA phosphodiesterase, partial [Cucurbita argyrosperma subsp. sororia]2.9e-14696.83Show/hide
Query:  MEALMASYGGSSSDEDVDTVS--------SASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYI
        MEALMASYGGSSSDEDVDTVS        SASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQA+RVRSFPHVQGNYALHLYIPVYI
Subjt:  MEALMASYGGSSSDEDVDTVS--------SASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYI

Query:  PTNARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTF
        PTNARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTF
Subjt:  PTNARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTF

Query:  LSMEIIAGGLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIEC
        LSMEIIAGGLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIEC
Subjt:  LSMEIIAGGLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIEC

KAG7017094.1 U6 snRNA phosphodiesterase [Cucurbita argyrosperma subsp. argyrosperma]4.5e-163100Show/hide
Query:  MEALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEV
        MEALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEV
Subjt:  MEALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEV

Query:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
        ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
Subjt:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRELMLKVDNII
        GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRELMLKVDNII
Subjt:  GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRELMLKVDNII

Query:  SL
        SL
Subjt:  SL

XP_022928923.1 U6 snRNA phosphodiesterase [Cucurbita moschata]8.2e-14995.53Show/hide
Query:  MEALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEV
        MEALMASYGGSSSDEDVDTVS +SASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQA+RVRSFPHVQGNYALHLYIPVYI TNARKEV
Subjt:  MEALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEV

Query:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
        ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
Subjt:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRE
        GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIG  + K+   P E
Subjt:  GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRE

XP_022969741.1 U6 snRNA phosphodiesterase [Cucurbita maxima]2.1e-14492.59Show/hide
Query:  MEALMASYGGSSSDEDVDTVS------SASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPT
        MEALMASYGGSSSDED DTVS      SASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQA+RVRSFPHVQGNYA+HLYIPVYIPT
Subjt:  MEALMASYGGSSSDEDVDTVS------SASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPT

Query:  NARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLS
        NARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDD KLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLS
Subjt:  NARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLS

Query:  MEIIAGGLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRE
        MEIIAGGLMEIRK IQVVNEVYKLHNLPEFYKE RPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKR IFTAKFNGIECKIG  + K+   P E
Subjt:  MEIIAGGLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRE

XP_023549871.1 U6 snRNA phosphodiesterase [Cucurbita pepo subsp. pepo]3.1e-14895.22Show/hide
Query:  MEALMASYGGSSSDEDVDTV--SSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARK
        MEALMASYGGSSSDEDVDTV  SSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQA+RVRSFPHVQGNYA+HLYIPVYIPTNARK
Subjt:  MEALMASYGGSSSDEDVDTV--SSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARK

Query:  EVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII
        EVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII
Subjt:  EVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEII

Query:  AGGLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRE
        AGGLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKR IFTAKFNGIECKIG  + K+   P E
Subjt:  AGGLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRE

TrEMBL top hitse value%identityAlignment
A0A0A0KPH5 U6 snRNA phosphodiesterase3.9e-12882.47Show/hide
Query:  MEALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEV
        M+AL ASYGGSSSDE+VDTVS  SAS SA  PQ  DET +FLPLPPPPLSLL+FPNST  LDDLPI QA+RVRSFPHVQGNYALH+YIPVY+PTNARKEV
Subjt:  MEALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEV

Query:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
        ALF+KK+S LVPALHLVDIDIPLD+LCKDD KLEQA AREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLSMEII G
Subjt:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRE
        GLMEIRK IQVVNEVYKLHNLPEFYKE RPHIS+AWALGD+S+L SQ+VH+E+K+S VKE  KR IFT KFNGIECKIG  + K+   P E
Subjt:  GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRE

A0A1S3CTB0 U6 snRNA phosphodiesterase1.3e-12883.86Show/hide
Query:  MEALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEV
        M+AL ASYGGSSSDE+VDTVS +SAS S   PQ  DET S LPLPPPPLSLL+FPNST  LDDLPI QA+RVRSFPHVQGNYALH+YIPVY+PTNARKEV
Subjt:  MEALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEV

Query:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
        ALF+KK+S LVPALHLVDIDIPLD+LCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETFVNDDLSRTFLSMEII G
Subjt:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKL
        GLMEIRK IQVVNEVYKLHNLPEFYKE RPHISLAWALGD+S++ SQ+VH+E+K+S VKE  KR IFT KFNGIECKIG  + K+
Subjt:  GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKL

A0A6J1DNL4 U6 snRNA phosphodiesterase7.9e-11375.95Show/hide
Query:  MEALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEV
        M+AL ASY GSSSDE+ D VS+A +  S   P  S        LPPPPLSLLDFPNS SAL DLPI Q +R RSFPHV+GNYALH+YIPVYIPT ++KEV
Subjt:  MEALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEV

Query:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
         LFLKK+S LVP+LHLVDID+PL  LCKD+HKLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ QRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
Subjt:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRE
        GLMEIRK IQVVNEVYK HNLPEFYKE RPHISLAWALGDLSKLLS+ V D+MK+S +   SKR IFT KF+GIECKIG    K+   P E
Subjt:  GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRE

A0A6J1EQH7 U6 snRNA phosphodiesterase4.0e-14995.53Show/hide
Query:  MEALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEV
        MEALMASYGGSSSDEDVDTVS +SASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQA+RVRSFPHVQGNYALHLYIPVYI TNARKEV
Subjt:  MEALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEV

Query:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
        ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
Subjt:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRE
        GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIG  + K+   P E
Subjt:  GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRE

A0A6J1HYN3 U6 snRNA phosphodiesterase1.0e-14492.59Show/hide
Query:  MEALMASYGGSSSDEDVDTVS------SASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPT
        MEALMASYGGSSSDED DTVS      SASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQA+RVRSFPHVQGNYA+HLYIPVYIPT
Subjt:  MEALMASYGGSSSDEDVDTVS------SASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPT

Query:  NARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLS
        NARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDD KLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLS
Subjt:  NARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLS

Query:  MEIIAGGLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRE
        MEIIAGGLMEIRK IQVVNEVYKLHNLPEFYKE RPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKR IFTAKFNGIECKIG  + K+   P E
Subjt:  MEIIAGGLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRE

SwissProt top hitse value%identityAlignment
Q0II50 U6 snRNA phosphodiesterase5.6e-1526.13Show/hide
Query:  ALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEVAL
        A +  Y  S S+++ +  +     A       S      LP+P   L +  FP++     D       RVR+FPH +GN+A H    VYIP  AR+E   
Subjt:  ALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEVAL

Query:  FLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALARE-FHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGG
                   L L+D      +LC     + + +  E FH+SLS++V +R H I   V  L+ ++ S  R+     + + + N + +RTF+ +E+ +G 
Subjt:  FLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALARE-FHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGG

Query:  LMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVK
               +  V+ V +  +L  FY++   HISLAW +GD    +      E++  + + +    +  A    I CK G     + +K
Subjt:  LMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVK

Q5I0I5 U6 snRNA phosphodiesterase6.4e-1923.08Show/hide
Query:  ALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEVAL
        A +  Y  S S+++ + V++  +   + L +           P P   L  FP++    +D       R+R+FPH +GN+A H+YIP       +  + +
Subjt:  ALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEVAL

Query:  FLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGL
         L +     P L  ++                     EFH+SLS++V +R H I   V +L+ ++ S +R++   ++ + + N + +RTF+ +E ++ G 
Subjt:  FLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGL

Query:  MEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVK
         +    +  V+ V K  +L  FY++   H+SLAW +GD    L      E+++ + + +    +       + CK G     + +K
Subjt:  MEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVK

Q6DEF6 U6 snRNA phosphodiesterase1.9e-1829.15Show/hide
Query:  LMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFL----------------PLPPPPLSLLD-FPNSTSALDDLPIGQASRVRSFPHVQGNYALHL
        ++ +Y  SSS+E+    S +S+S S    +L  ET   L                P  P P S+ + F +S     D       R+RSF H +GN+A ++
Subjt:  LMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFL----------------PLPPPPLSLLD-FPNSTSALDDLPIGQASRVRSFPHVQGNYALHL

Query:  YIPVYIPTNARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVND
        + P Y P  A      FL+ L+K++ A    DI +               ++ EFH+SLS+TV +R H I   V  +R  L   ++++    K + + N 
Subjt:  YIPVYIPTNARKEVALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVND

Query:  DLSRTFLSMEIIAG--GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIG
        + +RTFL ME+  G   L+E+ K   +V+E  K  NL  FY++   HISLAW +GD ++ L ++   E++  +   +          N + CK G
Subjt:  DLSRTFLSMEIIAG--GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIG

Q7ZYI9 U6 snRNA phosphodiesterase1.9e-1529.35Show/hide
Query:  MASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALD-DLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEVALF
        MA    SSS+ED       S      LP          PLPPP   L  F +     D D       R+RSF H +GN+A +    VYIP   ++E   F
Subjt:  MASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALD-DLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEVALF

Query:  LKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLM
        L  L +LV                  ++ +      EFHIS S+TV +R H I+  V  L+ KL    R+     + + + N + +RTFL +E ++ G+ 
Subjt:  LKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLM

Query:  EIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIG
         + + +  V+   +  NL  FY+E   H+SLAW +GD  + L  S   E++K + + +   ++       I CK G
Subjt:  EIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIG

Q91W78 U6 snRNA phosphodiesterase3.1e-2124.83Show/hide
Query:  ALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEVAL
        A +  Y  S S+++ + V++  +       +          LP P   L  FP++    +D       R+R+FPH +GN+A H+YIP     + R  +  
Subjt:  ALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEVAL

Query:  FLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGL
         L +    VP L L++                     EFH+SLS++V +R H I   V +L+ ++ S +R++   ++ + + N + +RTF+ +E ++ G 
Subjt:  FLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGL

Query:  MEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVK
         +    +  V+   K  +L  FY++   HISLAW +GD S  L      E+++ + + +    +     N + CK G     + +K
Subjt:  MEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVK

Arabidopsis top hitse value%identityAlignment
AT5G51170.1 unknown protein3.6e-8658.42Show/hide
Query:  MEALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEV
        MEAL ASYG SSSD D D +S AS   +      S E +S + LPPPPL+LLD   ST +LD        RVR+FPHV GNYALH+Y+PV IP   +KE+
Subjt:  MEALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEV

Query:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
          FLKK++ +VP LHLV+ D+PL ILCKDD K E+AL REFHISL R VP+RVHQI+S+++MLRQKLQ Q+RY IDF+KWE FVNDD +R+FLS+EI   
Subjt:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRE
        GL EI K I  VNEVYKLHNLPEFYK+ RPHISL WALGD+   L  +V  E++K       +  IFT+KF GIECKIG    K+   P E
Subjt:  GLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRE

AT5G51170.2 unknown protein4.5e-6057.55Show/hide
Query:  MEALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEV
        MEAL ASYG SSSD D D +S AS   +      S E +S + LPPPPL+LLD   ST +LD        RVR+FPHV GNYALH+Y+PV IP   +KE+
Subjt:  MEALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEV

Query:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG
          FLKK++ +VP LHLV+ D+PL ILCKDD K E+AL REFHISL R VP+RVHQI+S+++MLRQKLQ Q+RY IDF+KWE FVNDD +R+FLS+EI   
Subjt:  ALFLKKLSKLVPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAG

Query:  GLMEIRKHIQVV
        GL E+   + ++
Subjt:  GLMEIRKHIQVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCTCTGATGGCTTCTTATGGCGGAAGCTCGTCGGATGAAGATGTGGATACAGTTTCATCAGCATCAGCATCAGCTTCGGCTTCACTACCTCAGCTCTCCGATGA
GACTGAGAGTTTTTTACCTCTGCCTCCGCCGCCTCTTTCGCTTCTCGATTTTCCAAATTCCACCTCCGCTTTGGATGATTTACCAATCGGTCAGGCGTCTAGGGTTCGAA
GCTTCCCTCACGTTCAAGGAAACTATGCCCTACACCTCTATATCCCAGTGTACATACCAACTAATGCAAGGAAGGAGGTGGCGTTGTTTCTGAAGAAACTTTCCAAACTT
GTGCCTGCTCTCCATCTTGTTGATATTGACATTCCTTTAGACATTTTATGTAAAGATGACCACAAGCTTGAGCAAGCATTGGCCAGAGAATTTCACATAAGTTTGTCAAG
AACAGTGCCAATCCGAGTACACCAGATCGACTCAATAGTGACAATGCTTCGCCAGAAGCTTCAGTCTCAAAGGCGTTATTGGATTGATTTTAGTAAGTGGGAGACTTTTG
TTAACGATGATCTCTCCCGAACCTTTTTGTCAATGGAAATTATTGCTGGAGGGCTAATGGAGATCAGAAAACATATCCAAGTTGTTAATGAGGTTTATAAGCTCCACAAT
CTTCCTGAATTTTACAAGGAAGGAAGACCACATATATCTCTTGCCTGGGCATTAGGTGACCTTAGTAAATTATTGAGTCAATCAGTTCATGATGAAATGAAAAAGTCCAT
GGTTAAGGAAAAATCAAAGAGAAGTATTTTCACCGCCAAATTCAATGGCATTGAATGTAAGATTGGAGGCCTTCTGGGGAAGCTTAAAGTAAAGCCACGAGAGCTTATGC
TCAAAGTGGACAATATCATATCATTGTAG
mRNA sequenceShow/hide mRNA sequence
TTTATTTCACGACGAATTCTCTGTTGCGCCACCGTCGTCGCTGCCGTTGACAGAGCAGAGGATGGAGGCTCTGATGGCTTCTTATGGCGGAAGCTCGTCGGATGAAGATG
TGGATACAGTTTCATCAGCATCAGCATCAGCTTCGGCTTCACTACCTCAGCTCTCCGATGAGACTGAGAGTTTTTTACCTCTGCCTCCGCCGCCTCTTTCGCTTCTCGAT
TTTCCAAATTCCACCTCCGCTTTGGATGATTTACCAATCGGTCAGGCGTCTAGGGTTCGAAGCTTCCCTCACGTTCAAGGAAACTATGCCCTACACCTCTATATCCCAGT
GTACATACCAACTAATGCAAGGAAGGAGGTGGCGTTGTTTCTGAAGAAACTTTCCAAACTTGTGCCTGCTCTCCATCTTGTTGATATTGACATTCCTTTAGACATTTTAT
GTAAAGATGACCACAAGCTTGAGCAAGCATTGGCCAGAGAATTTCACATAAGTTTGTCAAGAACAGTGCCAATCCGAGTACACCAGATCGACTCAATAGTGACAATGCTT
CGCCAGAAGCTTCAGTCTCAAAGGCGTTATTGGATTGATTTTAGTAAGTGGGAGACTTTTGTTAACGATGATCTCTCCCGAACCTTTTTGTCAATGGAAATTATTGCTGG
AGGGCTAATGGAGATCAGAAAACATATCCAAGTTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGAAGGAAGACCACATATATCTCTTGCCTGGG
CATTAGGTGACCTTAGTAAATTATTGAGTCAATCAGTTCATGATGAAATGAAAAAGTCCATGGTTAAGGAAAAATCAAAGAGAAGTATTTTCACCGCCAAATTCAATGGC
ATTGAATGTAAGATTGGAGGCCTTCTGGGGAAGCTTAAAGTAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATATCATTGTAG
Protein sequenceShow/hide protein sequence
MEALMASYGGSSSDEDVDTVSSASASASASLPQLSDETESFLPLPPPPLSLLDFPNSTSALDDLPIGQASRVRSFPHVQGNYALHLYIPVYIPTNARKEVALFLKKLSKL
VPALHLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKHIQVVNEVYKLHN
LPEFYKEGRPHISLAWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIECKIGGLLGKLKVKPRELMLKVDNIISL