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Carg20829 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20829
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function (DUF1218)
Genome locationCarg_Chr15:9628803..9632169
RNA-Seq ExpressionCarg20829
SyntenyCarg20829
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009606 - Modifying wall lignin-1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579647.1 Protein MODIFYING WALL LIGNIN-2, partial [Cucurbita argyrosperma subsp. sororia]9.7e-8282.86Show/hide
Query:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------
        MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVS+                           
Subjt:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------

Query:  ------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFV
              FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGN VPAQDIALGQPQFP QNTQQPVFV
Subjt:  ------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFV

Query:  HEDTYARRQY
        HEDTYARRQY
Subjt:  HEDTYARRQY
KAG7017102.1 hypothetical protein SDJN02_22214, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-101100Show/hide
Query:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVSTFLLLLTGAALNDQHGGGTMYFGNYYYY
        MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVSTFLLLLTGAALNDQHGGGTMYFGNYYYY
Subjt:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVSTFLLLLTGAALNDQHGGGTMYFGNYYYY

Query:  CYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFVHEDTYARRQYFVRLGRRNSSPVRPLIVKHI
        CYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFVHEDTYARRQYFVRLGRRNSSPVRPLIVKHI
Subjt:  CYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFVHEDTYARRQYFVRLGRRNSSPVRPLIVKHI
XP_022928805.1 uncharacterized protein LOC111435617 [Cucurbita moschata]8.8e-8383.33Show/hide
Query:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------
        MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVS+                           
Subjt:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------

Query:  ------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFV
              FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFP QNTQQPVFV
Subjt:  ------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFV

Query:  HEDTYARRQY
        HEDTYARRQY
Subjt:  HEDTYARRQY
XP_022969754.1 uncharacterized protein LOC111468857 [Cucurbita maxima]2.5e-8282.38Show/hide
Query:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------
        MERRVLVVCS+VGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVS+                           
Subjt:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------

Query:  ------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFV
              FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPL GNPVPAQ IALGQPQFPPQNTQQPVFV
Subjt:  ------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFV

Query:  HEDTYARRQY
        HEDTYARRQY
Subjt:  HEDTYARRQY
XP_023550812.1 uncharacterized protein LOC111808843 [Cucurbita pepo subsp. pepo]8.8e-8382.86Show/hide
Query:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------
        MERRVLVVCSV GLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVS+                           
Subjt:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------

Query:  ------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFV
              FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPL GNPVPAQDIALGQPQFPPQNTQQPVFV
Subjt:  ------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFV

Query:  HEDTYARRQY
        HEDTYARRQY
Subjt:  HEDTYARRQY
TrEMBL top hitse value%identityAlignment
A0A0A0KRK6 Uncharacterized protein2.2e-7979.52Show/hide
Query:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------
        MER+VLVVCSVVGLLGILS+VT FVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVS+                           
Subjt:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------

Query:  ------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFV
              FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGA+LS ASVLLAIVYYLTLNLAKNNSPL GN  PAQ IALGQPQFPPQNTQQPVFV
Subjt:  ------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFV

Query:  HEDTYARRQY
        HEDTYARRQY
Subjt:  HEDTYARRQY
A0A6J1ESK8 uncharacterized protein LOC1114356174.2e-8383.33Show/hide
Query:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------
        MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVS+                           
Subjt:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------

Query:  ------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFV
              FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFP QNTQQPVFV
Subjt:  ------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFV

Query:  HEDTYARRQY
        HEDTYARRQY
Subjt:  HEDTYARRQY
A0A6J1H3L5 uncharacterized protein LOC1114597098.8e-8180Show/hide
Query:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------
        MERRVL+VCSVVGLLGILS+VT FVAEATRIKGSQVQF+STSECAYPRSPAMGLGLTAAISLLIAQLI+NVS+                           
Subjt:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------

Query:  ------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFV
              FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPL GNPVPAQ IALGQPQFPPQNTQQPVFV
Subjt:  ------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFV

Query:  HEDTYARRQY
        HED YARRQY
Subjt:  HEDTYARRQY
A0A6J1I3K6 uncharacterized protein LOC1114688571.2e-8282.38Show/hide
Query:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------
        MERRVLVVCS+VGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVS+                           
Subjt:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------

Query:  ------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFV
              FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPL GNPVPAQ IALGQPQFPPQNTQQPVFV
Subjt:  ------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFV

Query:  HEDTYARRQY
        HEDTYARRQY
Subjt:  HEDTYARRQY
A0A6J1K7C7 uncharacterized protein LOC1114908521.3e-7979.52Show/hide
Query:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------
        MERRVL+VCSVVGLLGILS+VT FVAEATRIKGSQVQF+STSECAYPRSPAMGLGLTAAISLLIAQLI+NVS+                           
Subjt:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------

Query:  ------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFV
              FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPL GNPVPAQ IALGQPQF PQNTQQPVFV
Subjt:  ------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFV

Query:  HEDTYARRQY
        HED YARRQY
Subjt:  HEDTYARRQY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G17210.1 Protein of unknown function (DUF1218)8.3e-3946.95Show/hide
Query:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFI---STSECAYPRSPAMGLGLTAAISLLIAQLIVNVST------------------------
        MERR +V+C V+ LLG+LS+VTAFVAEATRIK SQV      S ++C YPRSPA  LG T+A+ L++AQ+IV+VS+                        
Subjt:  MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFI---STSECAYPRSPAMGLGLTAAISLLIAQLIVNVST------------------------

Query:  ---------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQP
                 FL+LL+GAALND+H   +M  G   Y+CY+VKPGVF+ GAVLS  ++ L IVYYL   L  N   +         IA+GQPQ  P+  + P
Subjt:  ---------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQP

Query:  VFVHEDTYARRQY
        VFVHEDTY RRQ+
Subjt:  VFVHEDTYARRQY
AT5G17210.2 Protein of unknown function (DUF1218)5.6e-2742.69Show/hide
Query:  STSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKP
        S ++C YPRSPA  LG T+A+ L++AQ+IV+VS+                                 FL+LL+GAALND+H   +M  G   Y+CY+VKP
Subjt:  STSECAYPRSPAMGLGLTAAISLLIAQLIVNVST---------------------------------FLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKP

Query:  GVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFVHEDTYARRQY
        GVF+ GAVLS  ++ L IVYYL   L  N   +         IA+GQPQ  P+  + PVFVHEDTY RRQ+
Subjt:  GVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFVHEDTYARRQY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAAGGGTTTTGGTGGTGTGTTCTGTTGTGGGTTTACTCGGAATTTTATCATCTGTTACTGCTTTCGTTGCTGAGGCTACAAGAATCAAGGGGTCTCAGGTTCA
GTTTATCTCCACATCTGAGTGTGCATATCCACGGAGTCCAGCCATGGGTCTTGGTTTAACTGCTGCAATTTCTCTGTTGATTGCACAACTAATTGTAAATGTTTCAACCT
TCTTGTTGTTGCTGACCGGTGCTGCCCTTAACGACCAGCACGGTGGCGGGACTATGTACTTCGGTAACTACTACTATTACTGCTATGTCGTCAAACCCGGAGTCTTTGCT
GGAGGCGCCGTTCTGTCGTTTGCAAGTGTTCTATTGGCAATAGTCTATTACCTCACTTTAAATTTGGCAAAAAACAATAGCCCTTTGTTGGGGAACCCTGTTCCAGCTCA
AGACATTGCTTTGGGGCAGCCTCAGTTTCCACCACAAAATACTCAGCAACCTGTTTTTGTTCACGAAGATACGTATGCACGCCGACAGTACTTCGTTCGCCTAGGCAGAA
GAAACAGCAGCCCTGTCAGACCATTAATCGTGAAACATATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAAGGGTTTTGGTGGTGTGTTCTGTTGTGGGTTTACTCGGAATTTTATCATCTGTTACTGCTTTCGTTGCTGAGGCTACAAGAATCAAGGGGTCTCAGGTTCA
GTTTATCTCCACATCTGAGTGTGCATATCCACGGAGTCCAGCCATGGGTCTTGGTTTAACTGCTGCAATTTCTCTGTTGATTGCACAACTAATTGTAAATGTTTCAACCT
TCTTGTTGTTGCTGACCGGTGCTGCCCTTAACGACCAGCACGGTGGCGGGACTATGTACTTCGGTAACTACTACTATTACTGCTATGTCGTCAAACCCGGAGTCTTTGCT
GGAGGCGCCGTTCTGTCGTTTGCAAGTGTTCTATTGGCAATAGTCTATTACCTCACTTTAAATTTGGCAAAAAACAATAGCCCTTTGTTGGGGAACCCTGTTCCAGCTCA
AGACATTGCTTTGGGGCAGCCTCAGTTTCCACCACAAAATACTCAGCAACCTGTTTTTGTTCACGAAGATACGTATGCACGCCGACAGTACTTCGTTCGCCTAGGCAGAA
GAAACAGCAGCCCTGTCAGACCATTAATCGTGAAACATATATAG
Protein sequenceShow/hide protein sequence
MERRVLVVCSVVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQLIVNVSTFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFA
GGAVLSFASVLLAIVYYLTLNLAKNNSPLLGNPVPAQDIALGQPQFPPQNTQQPVFVHEDTYARRQYFVRLGRRNSSPVRPLIVKHI