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Carg20837 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20837
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPHB domain-containing protein
Genome locationCarg_Chr01:11404282..11404950
RNA-Seq ExpressionCarg20837
SyntenyCarg20837
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR001107 - Band 7 domain
IPR036013 - Band 7/SPFH domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579655.1 Hypersensitive-induced response protein 4, partial [Cucurbita argyrosperma subsp. sororia]3.3e-36100Show/hide
Query:  MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYISLTVVV
        MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYISLTVVV
Subjt:  MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYISLTVVV

KAG7037620.1 Hypersensitive-induced response protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-36100Show/hide
Query:  MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYISLTVVV
        MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYISLTVVV
Subjt:  MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYISLTVVV

XP_004143653.1 hypersensitive-induced response protein 4 [Cucumis sativus]1.7e-2782.89Show/hide
Query:  MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI
        MLAQPGFRF+NP AGE LAGILSTR RSL+VRVETKTKDNVFVQL+CSIQ+R+VK NADDAFYELQNP+ QIQ Y+
Subjt:  MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI

XP_008467278.1 PREDICTED: hypersensitive-induced response protein 4-like [Cucumis melo]1.7e-2782.89Show/hide
Query:  MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI
        MLAQPGFRF+NP AGE LAGILSTR RSL+VRVETKTKDNVFVQL+CSIQ+R+VK NADDAFYELQNP+ QIQ Y+
Subjt:  MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI

XP_038906820.1 hypersensitive-induced response protein 4-like [Benincasa hispida]5.7e-2884.21Show/hide
Query:  MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI
        MLAQPGFRF+NP AGE LAGILSTR RSL+VRVETKTKDNVFVQL+CSIQ+R+VK NADDAFYELQNPK QIQ Y+
Subjt:  MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI

TrEMBL top hitse value%identityAlignment
A0A058ZXU0 PHB domain-containing protein1.5e-2680Show/hide
Query:  LAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI
        LAQPG  F NPFAGE LAGILSTR +SLEVR+ETKTKDNVFVQL+CSIQ+R+VK NADDAFYELQNP+ QIQ Y+
Subjt:  LAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI

A0A0A0KL77 PHB domain-containing protein8.0e-2882.89Show/hide
Query:  MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI
        MLAQPGFRF+NP AGE LAGILSTR RSL+VRVETKTKDNVFVQL+CSIQ+R+VK NADDAFYELQNP+ QIQ Y+
Subjt:  MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI

A0A1S3CT63 hypersensitive-induced response protein 4-like8.0e-2882.89Show/hide
Query:  MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI
        MLAQPGFRF+NP AGE LAGILSTR RSL+VRVETKTKDNVFVQL+CSIQ+R+VK NADDAFYELQNP+ QIQ Y+
Subjt:  MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI

A0A5D3DAW1 Hypersensitive-induced response protein 4-like8.0e-2882.89Show/hide
Query:  MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI
        MLAQPGFRF+NP AGE LAGILSTR RSL+VRVETKTKDNVFVQL+CSIQ+R+VK NADDAFYELQNP+ QIQ Y+
Subjt:  MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI

A0A6A5PTU7 Putative Band 7 domain-containing protein5.2e-2778.67Show/hide
Query:  LAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI
        LAQPGF F NPFAGE+LAG+LSTR  SL+VR+ETKTKDNVFVQL+CSIQ+R++K NADDAFYELQNPK QIQ Y+
Subjt:  LAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI

SwissProt top hitse value%identityAlignment
Q5GI04 Hypersensitive-induced reaction 1 protein2.9e-1453.42Show/hide
Query:  QPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI
        +PG   +  F G  LAG LS R + L+VR ETKTKDNVFV +V SIQ+R +   A++AFY+L N K QIQ Y+
Subjt:  QPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI

Q6K550 Hypersensitive-induced response protein-like protein 26.4e-1450.68Show/hide
Query:  QPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI
        +PG  F+    G+ +AG LS R + L+VR ETKTKDNVFV +V S+Q+R +   A DAFY+L N + QIQ Y+
Subjt:  QPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI

Q6L4S3 Hypersensitive-induced response protein-like protein 11.3e-1452.05Show/hide
Query:  QPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI
        +PG   +  FAG+ +AG L+ R + L+VR ETKTKDNVFV +V SIQ+R +   A+DAFY+L N ++QIQ Y+
Subjt:  QPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI

Q9FHM7 Hypersensitive-induced response protein 41.7e-2773.33Show/hide
Query:  LAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI
        +A+PG  F NP AG++LAG+LSTR +SL+V++ETKTKDNVFVQLVCSIQ+R+VKA+ADDAFYELQNPK QIQ Y+
Subjt:  LAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI

Q9SRH6 Hypersensitive-induced response protein 35.8e-1551.39Show/hide
Query:  PGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI
        PG +F+    G+Y+AG L+ R + L+V+ ETKTKDNVFV +V SIQ+R++   A DAFY L NP  QI+ Y+
Subjt:  PGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI

Arabidopsis top hitse value%identityAlignment
AT1G69840.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family6.5e-1450.68Show/hide
Query:  QPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI
        +PG   +    G  +AG LS R + L+VR ETKTKDNVFV +V SIQ+R +  +A DAFY+L N + QIQ Y+
Subjt:  QPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI

AT1G69840.3 SPFH/Band 7/PHB domain-containing membrane-associated protein family6.5e-1450.68Show/hide
Query:  QPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI
        +PG   +    G  +AG LS R + L+VR ETKTKDNVFV +V SIQ+R +  +A DAFY+L N + QIQ Y+
Subjt:  QPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI

AT3G01290.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family4.1e-1651.39Show/hide
Query:  PGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI
        PG +F+    G+Y+AG L+ R + L+V+ ETKTKDNVFV +V SIQ+R++   A DAFY L NP  QI+ Y+
Subjt:  PGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI

AT5G51570.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family1.2e-2873.33Show/hide
Query:  LAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI
        +A+PG  F NP AG++LAG+LSTR +SL+V++ETKTKDNVFVQLVCSIQ+R+VKA+ADDAFYELQNPK QIQ Y+
Subjt:  LAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI

AT5G62740.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family5.9e-1550.68Show/hide
Query:  QPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI
        +PG  F+    G  +AG LS R + L+VR ETKTKDNVFV +V SIQ+R +   A+DA+Y+L N + QIQ Y+
Subjt:  QPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGCTCAGCCAGGTTTCCGTTTCATTAATCCATTTGCCGGCGAATACCTTGCCGGAATCCTCTCCACCAGGAGCCGCTCGCTTGAGGTTCGTGTCGAGACCAAGAC
TAAGGACAATGTGTTTGTGCAATTGGTTTGCTCAATACAATTCCGAATTGTCAAAGCAAATGCTGATGATGCATTTTATGAATTGCAAAATCCCAAAGCACAGATACAAG
TTTATATATCTTTGACGGTAGTTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGCTCAGCCAGGTTTCCGTTTCATTAATCCATTTGCCGGCGAATACCTTGCCGGAATCCTCTCCACCAGGAGCCGCTCGCTTGAGGTTCGTGTCGAGACCAAGAC
TAAGGACAATGTGTTTGTGCAATTGGTTTGCTCAATACAATTCCGAATTGTCAAAGCAAATGCTGATGATGCATTTTATGAATTGCAAAATCCCAAAGCACAGATACAAG
TTTATATATCTTTGACGGTAGTTGTCTGAATTCTTTTCTAATTAAGTACTTTCTTTGATGGGGTAATGTTTTCTTGTCTTATTGTTATTTTAGTGGTTCCCGCTCTTGTT
Protein sequenceShow/hide protein sequence
MLAQPGFRFINPFAGEYLAGILSTRSRSLEVRVETKTKDNVFVQLVCSIQFRIVKANADDAFYELQNPKAQIQVYISLTVVV