; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20840 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20840
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPhotolyase/cryptochrome alpha/beta domain-containing protein
Genome locationCarg_Chr01:11420069..11421083
RNA-Seq ExpressionCarg20840
SyntenyCarg20840
Gene Ontology termsNA
InterPro domainsIPR029058 - Alpha/Beta hydrolase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579658.1 Pheophytinase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]8.5e-6873.47Show/hide
Query:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK
        ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPT                               RTERADNWLISEMLRA                    
Subjt:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK

Query:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQKV
        SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQK+
Subjt:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQKV

KAG7037623.1 hypothetical protein SDJN02_01252, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-116100Show/hide
Query:  MRPNLEYSFFFERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFL
        MRPNLEYSFFFERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFL
Subjt:  MRPNLEYSFFFERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFL

Query:  PSNITLTDHEKSKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILR
        PSNITLTDHEKSKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILR
Subjt:  PSNITLTDHEKSKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILR

Query:  LETKQKVDSQ
        LETKQKVDSQ
Subjt:  LETKQKVDSQ

XP_022970224.1 uncharacterized protein LOC111469174 isoform X1 [Cucurbita maxima]5.0e-6873.37Show/hide
Query:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK
        ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPT                               RTERADNWLISEMLRA                    
Subjt:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK

Query:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQKVDSQ
        SKDPGGLVVLESIFSFDLSVPLN LLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELP+QVNSILCEWILRLETKQKVDSQ
Subjt:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQKVDSQ

XP_022970225.1 uncharacterized protein LOC111469174 isoform X2 [Cucurbita maxima]5.0e-6873.37Show/hide
Query:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK
        ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPT                               RTERADNWLISEMLRA                    
Subjt:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK

Query:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQKVDSQ
        SKDPGGLVVLESIFSFDLSVPLN LLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELP+QVNSILCEWILRLETKQKVDSQ
Subjt:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQKVDSQ

XP_023550061.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111808364 [Cucurbita pepo subsp. pepo]1.9e-6772.36Show/hide
Query:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK
        ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPT                               RTERADNWLISEMLRA                    
Subjt:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK

Query:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQKVDSQ
        SKDPGGLVVLESIFSFDLSVPLN+LLEGLEERVLIIQGMKDPIYNSKAVLAKL+EQCVGVTIKELDAGHCPHDELP+QVNSILCEWILRLETK KVDSQ
Subjt:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQKVDSQ

TrEMBL top hitse value%identityAlignment
A0A6J1E553 uncharacterized protein LOC111026138 isoform X13.3e-5764.1Show/hide
Query:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK
        ERQVSVAA LGARLLL YLRLKTKDIV+NCYPT                               RTER+DNWLISEMLRA                    
Subjt:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK

Query:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQK
        SKDPGGLVVLESIFSFDLSVPLNYLLEG EERVLIIQGMKDPIYNSK++L  LKE C GV IKELDAGHCPHDELP++VNSILCEW++R+E+K K
Subjt:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQK

A0A6J1EKW5 uncharacterized protein LOC111435603 isoform X14.5e-6770.85Show/hide
Query:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK
        E+QVSVAAWLGARLLLTYLR+KTKDIV+NCYPT                               RTERADNWL+SEMLRA                    
Subjt:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK

Query:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQKVDSQ
        SKDPGGLVVLESIFSFDLSVPLN+LLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELP+QVNSILCEWILRLETK KVDSQ
Subjt:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQKVDSQ

A0A6J1EQ34 uncharacterized protein LOC111435603 isoform X24.5e-6770.85Show/hide
Query:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK
        E+QVSVAAWLGARLLLTYLR+KTKDIV+NCYPT                               RTERADNWL+SEMLRA                    
Subjt:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK

Query:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQKVDSQ
        SKDPGGLVVLESIFSFDLSVPLN+LLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELP+QVNSILCEWILRLETK KVDSQ
Subjt:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQKVDSQ

A0A6J1I299 uncharacterized protein LOC111469174 isoform X22.4e-6873.37Show/hide
Query:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK
        ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPT                               RTERADNWLISEMLRA                    
Subjt:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK

Query:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQKVDSQ
        SKDPGGLVVLESIFSFDLSVPLN LLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELP+QVNSILCEWILRLETKQKVDSQ
Subjt:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQKVDSQ

A0A6J1I4X4 uncharacterized protein LOC111469174 isoform X12.4e-6873.37Show/hide
Query:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK
        ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPT                               RTERADNWLISEMLRA                    
Subjt:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK

Query:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQKVDSQ
        SKDPGGLVVLESIFSFDLSVPLN LLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELP+QVNSILCEWILRLETKQKVDSQ
Subjt:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQKVDSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G25290.1 DNA photolyases;DNA photolyases1.1e-3641.58Show/hide
Query:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK
        ER+V   A  G+RLLL +L+L  K ++K+CYP                                + ERAD++L++EMLRA                    
Subjt:  ERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHEK

Query:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRL
        S+DPG ++VLESIF FDLS+PLNYLL+G EE+ L+IQGM+DPI + +  +A LKE C  + IK++ AGHCPHDE+ ++VN I+CEWI+++
Subjt:  SKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRL

AT4G36530.1 alpha/beta-Hydrolases superfamily protein4.4e-0628.1Show/hide
Query:  ISEMLRAV---SSSVSFFLPSNITLTDHEKSKDPGGLVVLESIFSFDLSVPLNYLLEGLEER----VLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELD
        I  +L++V   S++V  +L  +I+    + + DP    V   + +  L+    Y L+ +  +    +L++ G  DP +   A   K+K      ++  L 
Subjt:  ISEMLRAV---SSSVSFFLPSNITLTDHEKSKDPGGLVVLESIFSFDLSVPLNYLLEGLEER----VLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELD

Query:  AGHCPHDELPKQVNSILCEWI
        AGHCPHDE+P+ VN  L +W+
Subjt:  AGHCPHDELPKQVNSILCEWI

AT4G36530.2 alpha/beta-Hydrolases superfamily protein4.4e-0628.1Show/hide
Query:  ISEMLRAV---SSSVSFFLPSNITLTDHEKSKDPGGLVVLESIFSFDLSVPLNYLLEGLEER----VLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELD
        I  +L++V   S++V  +L  +I+    + + DP    V   + +  L+    Y L+ +  +    +L++ G  DP +   A   K+K      ++  L 
Subjt:  ISEMLRAV---SSSVSFFLPSNITLTDHEKSKDPGGLVVLESIFSFDLSVPLNYLLEGLEER----VLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELD

Query:  AGHCPHDELPKQVNSILCEWI
        AGHCPHDE+P+ VN  L +W+
Subjt:  AGHCPHDELPKQVNSILCEWI

AT5G13800.1 pheophytinase5.4e-0442.86Show/hide
Query:  KLKEQCVGVTIKELD-AGHCPHDELPKQVNSILCEWILRLET
        K+K++       E+  AGHCPHDE+P+ VN ++  WI  LE+
Subjt:  KLKEQCVGVTIKELD-AGHCPHDELPKQVNSILCEWILRLET

AT5G13800.2 pheophytinase5.4e-0442.86Show/hide
Query:  KLKEQCVGVTIKELD-AGHCPHDELPKQVNSILCEWILRLET
        K+K++       E+  AGHCPHDE+P+ VN ++  WI  LE+
Subjt:  KLKEQCVGVTIKELD-AGHCPHDELPKQVNSILCEWILRLET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACCGAATCTCGAATATTCTTTCTTTTTCGAGAGGCAGGTTTCTGTTGCTGCATGGCTGGGTGCTCGACTCCTTCTAACTTACTTAAGACTGAAAACCAAGGACAT
AGTGAAGAATTGTTATCCTACTGTATGTGAACTAATGCCCCAATTTTTGTACTATTTCCTTGCATTTCATGTCATAGAACTTCAAAACTTTCCAACACTATTTTGCGCTG
TGCAGAGAACAGAGCGAGCTGATAACTGGCTTATCAGTGAGATGCTGAGAGCTGTATCCTCATCTGTAAGCTTTTTTCTGCCATCAAATATCACCTTAACGGATCATGAA
AAGTCCAAAGATCCTGGTGGCCTGGTGGTTCTGGAAAGTATTTTCAGCTTTGATCTTTCCGTTCCCCTTAATTATCTGTTGGAAGGATTGGAGGAAAGGGTTCTTATTAT
CCAGGGAATGAAAGATCCAATCTATAACTCCAAGGCTGTGTTGGCGAAGCTTAAAGAGCAGTGTGTAGGGGTTACGATCAAGGAATTGGATGCTGGGCATTGCCCACACG
ATGAACTGCCTAAACAAGTTAATTCTATTCTCTGTGAATGGATACTGAGACTGGAAACTAAACAAAAGGTAGACTCACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGACCGAATCTCGAATATTCTTTCTTTTTCGAGAGGCAGGTTTCTGTTGCTGCATGGCTGGGTGCTCGACTCCTTCTAACTTACTTAAGACTGAAAACCAAGGACAT
AGTGAAGAATTGTTATCCTACTGTATGTGAACTAATGCCCCAATTTTTGTACTATTTCCTTGCATTTCATGTCATAGAACTTCAAAACTTTCCAACACTATTTTGCGCTG
TGCAGAGAACAGAGCGAGCTGATAACTGGCTTATCAGTGAGATGCTGAGAGCTGTATCCTCATCTGTAAGCTTTTTTCTGCCATCAAATATCACCTTAACGGATCATGAA
AAGTCCAAAGATCCTGGTGGCCTGGTGGTTCTGGAAAGTATTTTCAGCTTTGATCTTTCCGTTCCCCTTAATTATCTGTTGGAAGGATTGGAGGAAAGGGTTCTTATTAT
CCAGGGAATGAAAGATCCAATCTATAACTCCAAGGCTGTGTTGGCGAAGCTTAAAGAGCAGTGTGTAGGGGTTACGATCAAGGAATTGGATGCTGGGCATTGCCCACACG
ATGAACTGCCTAAACAAGTTAATTCTATTCTCTGTGAATGGATACTGAGACTGGAAACTAAACAAAAGGTAGACTCACAATAACCATATTTAGTACTCTTTCCAAGTTTT
GAAGCCATTATTTATATTGAAGTACTCTTATAGCACCTGATTTGTTTATAGCCTTATAAATATGAATTAACTGTTTATTTAGTAG
Protein sequenceShow/hide protein sequence
MRPNLEYSFFFERQVSVAAWLGARLLLTYLRLKTKDIVKNCYPTVCELMPQFLYYFLAFHVIELQNFPTLFCAVQRTERADNWLISEMLRAVSSSVSFFLPSNITLTDHE
KSKDPGGLVVLESIFSFDLSVPLNYLLEGLEERVLIIQGMKDPIYNSKAVLAKLKEQCVGVTIKELDAGHCPHDELPKQVNSILCEWILRLETKQKVDSQ