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Carg20867 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20867
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr06:6875064..6875523
RNA-Seq ExpressionCarg20867
SyntenyCarg20867
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597110.1 hypothetical protein SDJN03_10290, partial [Cucurbita argyrosperma subsp. sororia]9.8e-5398.33Show/hide
Query:  MEETRSNESDIKEEQEMRDDSKGEASQNMGSGSGSGLDSSSSFLPEMNLVFVLLSLLSHENSNGEEGELTKAKEVEAITTYNIARSSVKKKDVIEAKPER
        MEETRSNESDIKEEQEMRDDSKGEASQNMGSGSGSGLDSSSSFLPEMNLVFVLLSLLSHE+SNGEEGELTKAKEVEAITTYNIARSSVKKKDVIEAKPER
Subjt:  MEETRSNESDIKEEQEMRDDSKGEASQNMGSGSGSGLDSSSSFLPEMNLVFVLLSLLSHENSNGEEGELTKAKEVEAITTYNIARSSVKKKDVIEAKPER

Query:  PRVAQRFHTTIKDHRHGRKM
         RVAQRFHTTIKDHRHGRKM
Subjt:  PRVAQRFHTTIKDHRHGRKM

KAG7028573.1 hypothetical protein SDJN02_09754, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-54100Show/hide
Query:  MEETRSNESDIKEEQEMRDDSKGEASQNMGSGSGSGLDSSSSFLPEMNLVFVLLSLLSHENSNGEEGELTKAKEVEAITTYNIARSSVKKKDVIEAKPER
        MEETRSNESDIKEEQEMRDDSKGEASQNMGSGSGSGLDSSSSFLPEMNLVFVLLSLLSHENSNGEEGELTKAKEVEAITTYNIARSSVKKKDVIEAKPER
Subjt:  MEETRSNESDIKEEQEMRDDSKGEASQNMGSGSGSGLDSSSSFLPEMNLVFVLLSLLSHENSNGEEGELTKAKEVEAITTYNIARSSVKKKDVIEAKPER

Query:  PRVAQRFHTTIKDHRHGRKM
        PRVAQRFHTTIKDHRHGRKM
Subjt:  PRVAQRFHTTIKDHRHGRKM

KGN56466.1 hypothetical protein Csa_011060 [Cucumis sativus]5.4e-1955.65Show/hide
Query:  MEETRSNESDIKEEQEMRDDSKGEASQNMGSGSGSGLDSSSSFLPEMNLVFVLLSLLS---HENSNGEEGELTKAKEVEAITTYNIARSSVKKKDVIEAK
        M E   NE+D K++QEMR+D       N G        SSSSFLP++NL+FV LSL+S   +E+SN   G   K KE+E  TTYNIA+SS++KKDVIEA+
Subjt:  MEETRSNESDIKEEQEMRDDSKGEASQNMGSGSGSGLDSSSSFLPEMNLVFVLLSLLS---HENSNGEEGELTKAKEVEAITTYNIARSSVKKKDVIEAK

Query:  PE-RPRVAQRFHTTIKDHRHGRKM
         E R +V QR HTTIKDHRHGRKM
Subjt:  PE-RPRVAQRFHTTIKDHRHGRKM

TrEMBL top hitse value%identityAlignment
A0A0A0L8Q3 Uncharacterized protein2.6e-1955.65Show/hide
Query:  MEETRSNESDIKEEQEMRDDSKGEASQNMGSGSGSGLDSSSSFLPEMNLVFVLLSLLS---HENSNGEEGELTKAKEVEAITTYNIARSSVKKKDVIEAK
        M E   NE+D K++QEMR+D       N G        SSSSFLP++NL+FV LSL+S   +E+SN   G   K KE+E  TTYNIA+SS++KKDVIEA+
Subjt:  MEETRSNESDIKEEQEMRDDSKGEASQNMGSGSGSGLDSSSSFLPEMNLVFVLLSLLS---HENSNGEEGELTKAKEVEAITTYNIARSSVKKKDVIEAK

Query:  PE-RPRVAQRFHTTIKDHRHGRKM
         E R +V QR HTTIKDHRHGRKM
Subjt:  PE-RPRVAQRFHTTIKDHRHGRKM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGACAAGATCAAATGAATCAGATATTAAAGAAGAACAAGAAATGAGAGACGATAGTAAAGGAGAAGCTAGTCAAAACATGGGGTCGGGGTCGGGGTCGGGTTT
GGATTCAAGTTCGTCGTTTCTACCGGAGATGAACCTTGTTTTTGTGCTTCTTTCATTGCTTTCTCACGAAAATTCAAATGGTGAAGAGGGTGAACTCACGAAAGCAAAAG
AGGTTGAAGCCATTACAACTTACAATATAGCTCGATCGAGTGTAAAAAAGAAAGACGTGATCGAAGCCAAGCCAGAACGACCACGAGTAGCTCAAAGGTTCCATACAACA
ATAAAGGATCACAGGCATGGCAGAAAAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGACAAGATCAAATGAATCAGATATTAAAGAAGAACAAGAAATGAGAGACGATAGTAAAGGAGAAGCTAGTCAAAACATGGGGTCGGGGTCGGGGTCGGGTTT
GGATTCAAGTTCGTCGTTTCTACCGGAGATGAACCTTGTTTTTGTGCTTCTTTCATTGCTTTCTCACGAAAATTCAAATGGTGAAGAGGGTGAACTCACGAAAGCAAAAG
AGGTTGAAGCCATTACAACTTACAATATAGCTCGATCGAGTGTAAAAAAGAAAGACGTGATCGAAGCCAAGCCAGAACGACCACGAGTAGCTCAAAGGTTCCATACAACA
ATAAAGGATCACAGGCATGGCAGAAAAATGTGA
Protein sequenceShow/hide protein sequence
MEETRSNESDIKEEQEMRDDSKGEASQNMGSGSGSGLDSSSSFLPEMNLVFVLLSLLSHENSNGEEGELTKAKEVEAITTYNIARSSVKKKDVIEAKPERPRVAQRFHTT
IKDHRHGRKM