; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20872 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20872
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNDR1/HIN1-like protein 6 isoform X1
Genome locationCarg_Chr06:6852509..6852925
RNA-Seq ExpressionCarg20872
SyntenyCarg20872
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597106.1 NDR1/HIN1-like protein 6, partial [Cucurbita argyrosperma subsp. sororia]1.2e-70100Show/hide
Query:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT
        MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT
Subjt:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT

Query:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
        DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
Subjt:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA

KAG7028568.1 hypothetical protein SDJN02_09749, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-70100Show/hide
Query:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT
        MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT
Subjt:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT

Query:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
        DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
Subjt:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA

XP_022933893.1 NDR1/HIN1-like protein 6 isoform X1 [Cucurbita moschata]1.2e-70100Show/hide
Query:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT
        MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT
Subjt:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT

Query:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
        DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
Subjt:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA

XP_022933901.1 NDR1/HIN1-like protein 6 isoform X2 [Cucurbita moschata]1.2e-70100Show/hide
Query:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT
        MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT
Subjt:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT

Query:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
        DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
Subjt:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA

XP_023539044.1 NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo]2.0e-7098.55Show/hide
Query:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT
        MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLL+LI+VAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT
Subjt:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT

Query:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
        DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
Subjt:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA

TrEMBL top hitse value%identityAlignment
A0A6J1F0B0 NDR1/HIN1-like protein 6 isoform X25.8e-71100Show/hide
Query:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT
        MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT
Subjt:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT

Query:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
        DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
Subjt:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA

A0A6J1F647 NDR1/HIN1-like protein 6 isoform X15.8e-71100Show/hide
Query:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT
        MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT
Subjt:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT

Query:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
        DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
Subjt:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA

A0A6J1IDN7 NDR1/HIN1-like protein 6 isoform X37.1e-6997.83Show/hide
Query:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT
        MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCR CCCFLCFFLLVLIVV VAAGGVLYLWFEPKLPVFHLQLFRI KLNVT
Subjt:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT

Query:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
        DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
Subjt:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA

A0A6J1IEU7 NDR1/HIN1-like protein 6 isoform X27.1e-6997.83Show/hide
Query:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT
        MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCR CCCFLCFFLLVLIVV VAAGGVLYLWFEPKLPVFHLQLFRI KLNVT
Subjt:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT

Query:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
        DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
Subjt:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA

A0A6J1IHC7 NDR1/HIN1-like protein 6 isoform X17.1e-6997.83Show/hide
Query:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT
        MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCR CCCFLCFFLLVLIVV VAAGGVLYLWFEPKLPVFHLQLFRI KLNVT
Subjt:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVT

Query:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
        DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA
Subjt:  DKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA

SwissProt top hitse value%identityAlignment
Q8LD98 NDR1/HIN1-like protein 63.3e-0739.08Show/hide
Query:  KKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKNPNSKLSLNYGD
        KKRRS C  C C+   FLL+L+V   A+ G+LYL F+PKLP + +   ++ +  +    D S   A  +  I  KNPN K+ + Y D
Subjt:  KKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKNPNSKLSLNYGD

Arabidopsis top hitse value%identityAlignment
AT1G01453.1 unknown protein3.2e-2140.43Show/hide
Query:  EPPLKPVLQKPPGYKELNLAAQPVVRPSARKLI---LPSPMNQKNKKRR-SFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLN
        E PL+P LQKPPG+++     QP   PS    +    P P++  +KKRR SFCR  CC +C    V++++ + A  V +LW+ PKLPV  L  F+I   N
Subjt:  EPPLKPVLQKPPGYKELNLAAQPVVRPSARKLI---LPSPMNQKNKKRR-SFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLN

Query:  VTD-KSDG--SYLNARTLGRIEIKNPNSKLSLNYGDIEIKI
         +D KSD   S+L+A T   ++ +NPN KL+  YGD ++ +
Subjt:  VTD-KSDG--SYLNARTLGRIEIKNPNSKLSLNYGDIEIKI

AT1G01453.2 unknown protein3.2e-2140.43Show/hide
Query:  EPPLKPVLQKPPGYKELNLAAQPVVRPSARKLI---LPSPMNQKNKKRR-SFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLN
        E PL+P LQKPPG+++     QP   PS    +    P P++  +KKRR SFCR  CC +C    V++++ + A  V +LW+ PKLPV  L  F+I   N
Subjt:  EPPLKPVLQKPPGYKELNLAAQPVVRPSARKLI---LPSPMNQKNKKRR-SFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLN

Query:  VTD-KSDG--SYLNARTLGRIEIKNPNSKLSLNYGDIEIKI
         +D KSD   S+L+A T   ++ +NPN KL+  YGD ++ +
Subjt:  VTD-KSDG--SYLNARTLGRIEIKNPNSKLSLNYGDIEIKI

AT1G65690.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family2.4e-0839.08Show/hide
Query:  KKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKNPNSKLSLNYGD
        KKRRS C  C C+   FLL+L+V   A+ G+LYL F+PKLP + +   ++ +  +    D S   A  +  I  KNPN K+ + Y D
Subjt:  KKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKNPNSKLSLNYGD

AT2G46300.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family2.8e-2540.14Show/hide
Query:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSAR----KLILPSPMNQK-NKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRIL
        M +  + PVLQKPPGY++ N+++ P   P  +    +  +P P + +  KKRRS CR CCC +C  L++ I + +    V YLWF+PKLP F L  FR+ 
Subjt:  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSAR----KLILPSPMNQK-NKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRIL

Query:  KLNVTDKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIA
           + D  DG+ L+A  + R+E+KNPNSKL   YG+  + ++
Subjt:  KLNVTDKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIA

AT4G01110.1 unknown protein8.1e-1732.65Show/hide
Query:  EPPLKPVLQKPPGYKELNLAAQPVVRPSAR---------KLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFR
        E  LKPVLQKPPGY+EL+   Q  +  S+          K  +P+      K++ S CR  CC +C  + ++I++ +    V +L++ P+LPV  L  FR
Subjt:  EPPLKPVLQKPPGYKELNLAAQPVVRPSAR---------KLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFR

Query:  ILKLNVTDKSDG---SYLNARTLGRIEIKNPNSKLSLNYGDIEIKIA
        +   N +    G   S L A    R++ +NPN KL   YG++++ ++
Subjt:  ILKLNVTDKSDG---SYLNARTLGRIEIKNPNSKLSLNYGDIEIKIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGAGCCGCCATTGAAACCTGTTCTCCAGAAGCCTCCGGGGTATAAAGAACTGAATCTCGCTGCTCAGCCGGTGGTGAGACCGTCGGCGAGGAAACTGATTCTTCC
TTCGCCGATGAACCAGAAGAACAAGAAGCGACGGAGCTTCTGCCGTGGATGCTGTTGTTTCCTCTGCTTTTTCCTTCTGGTTCTGATCGTTGTAGCTGTCGCCGCTGGTG
GAGTTTTATACCTCTGGTTTGAGCCAAAACTCCCCGTATTTCATCTCCAATTATTCCGAATCTTGAAATTGAACGTCACCGACAAATCGGACGGCTCGTATCTAAACGCG
AGAACCCTCGGTCGTATCGAAATCAAGAACCCTAACTCGAAGTTATCACTGAATTACGGCGATATCGAGATCAAAATCGCCGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAGAGCCGCCATTGAAACCTGTTCTCCAGAAGCCTCCGGGGTATAAAGAACTGAATCTCGCTGCTCAGCCGGTGGTGAGACCGTCGGCGAGGAAACTGATTCTTCC
TTCGCCGATGAACCAGAAGAACAAGAAGCGACGGAGCTTCTGCCGTGGATGCTGTTGTTTCCTCTGCTTTTTCCTTCTGGTTCTGATCGTTGTAGCTGTCGCCGCTGGTG
GAGTTTTATACCTCTGGTTTGAGCCAAAACTCCCCGTATTTCATCTCCAATTATTCCGAATCTTGAAATTGAACGTCACCGACAAATCGGACGGCTCGTATCTAAACGCG
AGAACCCTCGGTCGTATCGAAATCAAGAACCCTAACTCGAAGTTATCACTGAATTACGGCGATATCGAGATCAAAATCGCCGCTTAA
Protein sequenceShow/hide protein sequence
MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNA
RTLGRIEIKNPNSKLSLNYGDIEIKIAA