; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20891 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20891
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionnon-specific lipid-transfer protein-like
Genome locationCarg_Chr06:6706433..6707500
RNA-Seq ExpressionCarg20891
SyntenyCarg20891
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR000528 - Plant non-specific lipid-transfer protein/Par allergen
IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028550.1 Non-specific lipid-transfer protein 3 [Cucurbita argyrosperma subsp. argyrosperma]4.5e-79100Show/hide
Query:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA
        MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA
Subjt:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA

Query:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHHH
        YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHHH
Subjt:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHHH

XP_022938404.1 non-specific lipid-transfer protein 3-like [Cucurbita moschata]1.4e-7798Show/hide
Query:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA
        MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGS+GG LGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA
Subjt:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA

Query:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHHH
        YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSG+PNEVGNCHHH
Subjt:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHHH

XP_022974667.1 non-specific lipid-transfer protein 3-like [Cucurbita maxima]2.5e-7495.97Show/hide
Query:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA
        MSGIYNLRLMISALT IAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGS+GG LGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA
Subjt:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA

Query:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHH
        YDPNRIPSIPEGCGIPVQIPPIDNST+CSEVEGFEFGSG+ NEVGNCHH
Subjt:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHH

XP_022974952.1 non-specific lipid-transfer protein 3-like [Cucurbita maxima]3.9e-7596.64Show/hide
Query:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA
        MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGS+GG LGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA
Subjt:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA

Query:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHH
        YDPNRIPSIPEGCGIPVQIPPIDNST+CSEVEGFEFGSG+ NEVGNCHH
Subjt:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHH

XP_023539575.1 non-specific lipid-transfer protein 3-like [Cucurbita pepo subsp. pepo]1.3e-7596Show/hide
Query:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA
        MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGG LGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLS+IGA
Subjt:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA

Query:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHHH
        YDPNRIPSI +GCGIPVQIPPIDNST+CSEVEGFEFGSG+PNEVGNCHHH
Subjt:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHHH

TrEMBL top hitse value%identityAlignment
A0A6J1ECH4 non-specific lipid-transfer protein-like2.4e-4664Show/hide
Query:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA
        MSGI++LR  I AL F+A+ T S MV LSQ+ D+ +CI V QELSPCL FIKGS+    GENP PSCC+GV KL  DAKTK D+VDLCECIK SLSMIG 
Subjt:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA

Query:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHHH
        YDP+RIP IPE CGIP QIPPID+ST+CS+ E ++FGS    E+ + H+H
Subjt:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHHH

A0A6J1FDZ9 non-specific lipid-transfer protein 3-like7.0e-7898Show/hide
Query:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA
        MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGS+GG LGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA
Subjt:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA

Query:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHHH
        YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSG+PNEVGNCHHH
Subjt:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHHH

A0A6J1IAV8 non-specific lipid-transfer protein 3-like1.2e-7495.97Show/hide
Query:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA
        MSGIYNLRLMISALT IAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGS+GG LGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA
Subjt:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA

Query:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHH
        YDPNRIPSIPEGCGIPVQIPPIDNST+CSEVEGFEFGSG+ NEVGNCHH
Subjt:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHH

A0A6J1IBN9 non-specific lipid-transfer protein 3-like1.9e-7596.64Show/hide
Query:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA
        MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGS+GG LGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA
Subjt:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA

Query:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHH
        YDPNRIPSIPEGCGIPVQIPPIDNST+CSEVEGFEFGSG+ NEVGNCHH
Subjt:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHH

A0A6J1IV21 non-specific lipid-transfer protein-like6.4e-4764Show/hide
Query:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA
        MSGI++LR  I AL F+A+     MV LSQ+ D+ +CI V QELSPCL FIKGS+ G  GENP PSCC+GV KL  DAKTK D+VDLCECIK SLSMIG 
Subjt:  MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGA

Query:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHHH
        YDP+RIP IPE CGIP QIPPID+ST+CS+ EG++FGS   +E+ + H+H
Subjt:  YDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHHH

SwissProt top hitse value%identityAlignment
O04004 Non-specific lipid-transfer protein6.4e-1236.46Show/hide
Query:  SCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTNCSEV
        +C  V   L+PC  F+        G+ P  +CC+GV  L    KTK D+V +C CIK+    I AYDP R+P +   CG+    P +D + +CS++
Subjt:  SCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTNCSEV

O24038 Non-specific lipid-transfer protein 21.6e-0733.05Show/hide
Query:  IAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGC--G
        IA      MV ++ + +  +C  V   L+PCL ++   N G LG      CC GV  L   A+T  D+   C C+K + S     D  +  S+P  C   
Subjt:  IAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGC--G

Query:  IPVQIPPIDNSTNCSEVE
        IP +I P   ST+CS+V+
Subjt:  IPVQIPPIDNSTNCSEVE

Q43748 Non-specific lipid-transfer protein1.5e-0830.17Show/hide
Query:  FIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGI
        F   L   MMVA +   +  +C LVA +L+PC+ +++G+ G      P  +CC G+  L + A +  D+   C C+K + + I   +  +  S+P  CG+
Subjt:  FIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGI

Query:  PVQIPPIDNSTNCSEV
         V    I  +TNC+ +
Subjt:  PVQIPPIDNSTNCSEV

Q43871 Non-specific lipid-transfer protein Cw182.1e-1033.87Show/hide
Query:  RLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIP
        R   + L  +A++ + ++VA    +   +C  V+  L PC ++ KGS     G +P   CCSGV +LA  A++  DK   C C+K   S+ GAY+  R  
Subjt:  RLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIP

Query:  SIPEGCGIPVQIPPIDNSTNCSEV
         IP  CG+ V    I  S +CS++
Subjt:  SIPEGCGIPVQIPPIDNSTNCSEV

Q9ZPW9 Non-specific lipid-transfer protein 81.5e-0835.48Show/hide
Query:  SCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCG--IPVQIPPIDNST
        SC +V Q+L PC+S++   +G     NPP +CC GV  LAA   T  DK   C+CIK   + +    P    ++   CG  +PV   P  + T
Subjt:  SCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCG--IPVQIPPIDNST

Arabidopsis top hitse value%identityAlignment
AT2G15325.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.6e-0526.97Show/hide
Query:  LSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVE
        L+PCL ++           P P CCSG+ K+    KT +D+ D+C C+    ++  A D  +  ++P+ C + +   P+    +CS ++
Subjt:  LSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVE

AT2G18370.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.0e-0935.48Show/hide
Query:  SCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCG--IPVQIPPIDNST
        SC +V Q+L PC+S++   +G     NPP +CC GV  LAA   T  DK   C+CIK   + +    P    ++   CG  +PV   P  + T
Subjt:  SCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCG--IPVQIPPIDNST

AT3G08770.1 lipid transfer protein 63.7e-0730.25Show/hide
Query:  MLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPS---IPEGCGI
        +L   +++AL       SC  V  +L PCLS++  + GG +    P  CC+G+T L + A+T  D+  +C CIK ++  +    P  I +   +P  CG+
Subjt:  MLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPS---IPEGCGI

Query:  --PVQIPPIDNSTNCSEVE
          P +  P   ST+C  ++
Subjt:  --PVQIPPIDNSTNCSEVE

AT3G08770.2 lipid transfer protein 61.8e-0631.3Show/hide
Query:  MLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPS---IPEGCGI
        +L   +++AL       SC  V  +L PCLS++  + GG +    P  CC+G+T L + A+T  D+  +C CIK ++  +    P  I +   +P  CG+
Subjt:  MLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPS---IPEGCGI

Query:  --PVQIPPIDNSTNC
          P +  P   ST+C
Subjt:  --PVQIPPIDNSTNC

AT5G01870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.9e-0730.3Show/hide
Query:  SCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMI--GAYDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVE
        SC  V   L PC+ ++    GG++    P SCC+G+  L+  A + +DK  +C CIK  +  +   +    +  ++P  CG+ +    ID STNC+ ++
Subjt:  SCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMI--GAYDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGAATCTACAATCTCCGCTTGATGATCAGTGCACTAACCTTCATCGCCATGCTTACAAGCTCCATGATGGTCGCGCTGTCTCAGAATGTCGACATGGGAAGCTG
CATACTGGTGGCGCAGGAGCTATCTCCATGTTTGAGCTTCATCAAAGGCAGCAACGGAGGGTCTCTTGGAGAGAATCCACCGCCGTCGTGCTGCAGTGGCGTTACTAAGT
TGGCCGCCGATGCTAAAACGAAGAACGATAAGGTTGATTTGTGCGAGTGTATCAAGAAGAGTTTGTCGATGATCGGAGCTTATGACCCGAATCGCATTCCTTCGATTCCC
GAAGGCTGCGGAATCCCAGTTCAAATTCCTCCCATCGATAATTCCACCAACTGCTCAGAGGTTGAAGGCTTTGAATTTGGAAGTGGCATACCAAATGAGGTTGGGAATTG
CCATCATCATTGA
mRNA sequenceShow/hide mRNA sequence
TGTGTGTCAATAACCAAAAGAAACTCATAAAATCGGCATGGTAGCAGAATTTCAGGAATCGTTACACAAGAAACTGATATAAAAACACACAAAATCGTAAACCCACCAAG
TGTTTGTAAAAATTCCCAAGTGAAATATGTCAGGAATCTACAATCTCCGCTTGATGATCAGTGCACTAACCTTCATCGCCATGCTTACAAGCTCCATGATGGTCGCGCTG
TCTCAGAATGTCGACATGGGAAGCTGCATACTGGTGGCGCAGGAGCTATCTCCATGTTTGAGCTTCATCAAAGGCAGCAACGGAGGGTCTCTTGGAGAGAATCCACCGCC
GTCGTGCTGCAGTGGCGTTACTAAGTTGGCCGCCGATGCTAAAACGAAGAACGATAAGGTTGATTTGTGCGAGTGTATCAAGAAGAGTTTGTCGATGATCGGAGCTTATG
ACCCGAATCGCATTCCTTCGATTCCCGAAGGCTGCGGAATCCCAGTTCAAATTCCTCCCATCGATAATTCCACCAACTGCTCAGAGGTTGAAGGCTTTGAATTTGGAAGT
GGCATACCAAATGAGGTTGGGAATTGCCATCATCATTGATCCCAATCAACATAAACCAAGCCAAAATCCCATATGATGTTCTTCTTAAGTTCCTCTTCGTTTCAAAATAA
GATTGAGTCTTGGTCTCAATAATCCTTATTTACTTCCTAATAATACTCTAATAACGATTACCAATAATCATAATTTCATCCGGTTCATCAATTTCTTCCCATTTCTCTTA
TTTTAATCGTGAATTTGGAGACAATGAATATCTTAAAAAATACGGGAAAGTCTCCAACTTTTTAGTATCTAATAAGTCTCTAAACTTTCAATTTTGTAATTAATAGACCT
TGGACTTTAGAATATTTAATAGATTCTTGAACTTTTCGTGATTTT
Protein sequenceShow/hide protein sequence
MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIP
EGCGIPVQIPPIDNSTNCSEVEGFEFGSGIPNEVGNCHHH