CuGenDBv2

Gene ID	Carg20899
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	CCHC-type domain-containing protein
Genome location	Carg_Chr06:6674313..6676095
RNA-Seq Expression	Carg20899
Synteny	Carg20899
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR009044 - ssDNA-binding transcriptional regulator IPR036875 - Zinc finger, CCHC-type superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6597071.1 RNA polymerase II transcriptional coactivator KELP, partial [Cucurbita argyrosperma subsp. sororia]

1.5e-123

75.15

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Query:  GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESS
        GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWA QMEFLLRRLKIAYVLSDHRPTSMLGPESS
Subjt:  GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESS

Query:  SGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMR
        SGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMR
Subjt:  SGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMR

Query:  IDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEGH
        IDEDFHVSAIISKLPPSWTNVFVKLM+   +                                                          LL         
Subjt:  IDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEGH

Query:  ISRDCPSSKICQALRGLSKCEIKVLSDVSA
                +ICQALRGLSKCEIKVLSDVSA
Subjt:  ISRDCPSSKICQALRGLSKCEIKVLSDVSA

KAG7028542.1 hypothetical protein SDJN02_09723, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.7e-210

100

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Query:  MCWKISGNSILLYHVSSVNFTYLPPPPHLFSFDPLLYGRGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRF
        MCWKISGNSILLYHVSSVNFTYLPPPPHLFSFDPLLYGRGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRF
Subjt:  MCWKISGNSILLYHVSSVNFTYLPPPPHLFSFDPLLYGRGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRF

Query:  DGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGT
        DGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGT
Subjt:  DGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGT

Query:  RRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPF
        RRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPF
Subjt:  RRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPF

Query:  MNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEGHISRDCPSSKICQALRGLSKCEIKVLSDVSA
        MNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEGHISRDCPSSKICQALRGLSKCEIKVLSDVSA
Subjt:  MNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEGHISRDCPSSKICQALRGLSKCEIKVLSDVSA

XP_022945450.1 uncharacterized protein LOC111449676 [Cucurbita moschata]

2.5e-171

99.03

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Query:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPES
        +GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWA QMEFLLRRLKIAYVLSDHRPTSMLGPES
Subjt:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPES

Query:  SSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGM
        SSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGM
Subjt:  SSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGM

Query:  RIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEG
        RIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERP MNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEG
Subjt:  RIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEG

Query:  HISRDCPSSK
        HISRDCPSSK
Subjt:  HISRDCPSSK

XP_023539029.1 uncharacterized protein LOC111799782 [Cucurbita pepo subsp. pepo]

1.4e-169

98.06

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Query:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPES
        +GISLTTEQWSAFRSNIPAIEEAILQMKRKI+RSEHDANTSGA SVPATGSAPKFPSETIRFDGKNYRVWA QMEFLLRRLKIAYVLSDHRPT+MLGPES
Subjt:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPES

Query:  SSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGM
        SSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGM
Subjt:  SSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGM

Query:  RIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEG
        RIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPF+NHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEG
Subjt:  RIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEG

Query:  HISRDCPSS
        HISRDCPSS
Subjt:  HISRDCPSS

XP_038878142.1 uncharacterized protein LOC120070296 [Benincasa hispida]

6.6e-108

67.5

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Query:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVS-VPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPE
        +GIS++TEQWSAF+SNIPAIE+AILQMK K KRSEHDA+  GAVS +    + P FP+ETIRFDGKNY +WA QME LL+ LKIAYVLS+  PT +LGPE
Subjt:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVS-VPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPE

Query:  SSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLY-LCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISA
        SSSGN +++KA+EQ+WMSDD MC   ILNSLSD LF++Y  +TMSA ELW EL  LY L ++GT+RSQVKKYLEFRMVEEKSILEQVE+LNNIA+SI+SA
Subjt:  SSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLY-LCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISA

Query:  GMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSG--------GERPFMNHRRKMGDQMSQSLPSRKREWKMDVKT
        G  IDEDFHVSAIISKLP SW +V+V LM E++L    LIDRLR EE+LRTQ+NSH SG        G+    NH  KM D    SLP RKREW+ DVKT
Subjt:  GMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSG--------GERPFMNHRRKMGDQMSQSLPSRKREWKMDVKT

Query:  LLCLNCGKEGHISRDCPSSK
        LLCLNCGKEGH S +CPS K
Subjt:  LLCLNCGKEGHISRDCPSSK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L3U5 CCHC-type domain-containing protein

4.6e-107

66.04

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Query:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATG-SAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPE
        +GIS+ TEQWS F+SNIPAI EAILQMKR  KRSEHDA   GA S P T  ++PK+P ETIRFDGKNY  WAHQME LL+ LKIAYVLS+  PT++LG E
Subjt:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATG-SAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPE

Query:  SSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLC-DYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISA
        SSSGN ++SKA+EQ+WM DDHMCR  ILNSLSD LF++Y+K+TMSA ELWKEL  LYL  ++GT+RSQVKKYLEF+MVEEKSILEQVEELN+IA+SI S+
Subjt:  SSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLC-DYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISA

Query:  GMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSG--------GERPFMNHRRKMGDQMSQSLPSRKREWKMDVKT
        G  IDEDFHVSAIISKLP SW NV+V LM E++LP   L DRLR EE+LRTQ+NS  SG        G+    NH  KMGD    ++P RK+E + +VKT
Subjt:  GMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSG--------GERPFMNHRRKMGDQMSQSLPSRKREWKMDVKT

Query:  LLCLNCGKEGHISRDCPSSKI
        LLCL+CGKEGH S +CP+ K+
Subjt:  LLCLNCGKEGHISRDCPSSKI

A0A1S3AV18 uncharacterized protein LOC103483179

1.8e-106

65.62

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Query:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPES
        +GIS+ TEQWS F+SNIPAI EAILQMKR  KRSEHDA+  GA+S P   + PKFP ETIRFDGKNY  WAHQME LL+ LKIAYVLS+  PT++LG ES
Subjt:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPES

Query:  SSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLY-LCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAG
        SSGN ++SK +EQ+WMSDDHMC   ILNSLSD LF++Y+K+ MSA ELWKEL  LY L ++GT+RSQVKKYLEF+MVEEKSILEQVEELN+IA+SI SAG
Subjt:  SSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLY-LCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAG

Query:  MRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRS--------GGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTL
          IDEDFHVSAIISKLP SW NV++ LM+E +LP   L DRLR EE+LRTQ+NS  S         G+    NH  KMGD M  ++P RK+E + +VKTL
Subjt:  MRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRS--------GGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTL

Query:  LCLNCGKEGHISRDCPSSKI
        LCL+CGKEGH S +CP+ K+
Subjt:  LCLNCGKEGHISRDCPSSKI

A0A5A7TZ44 Zinc knuckle family protein, putative isoform 2

1.8e-106

65.62

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Query:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPES
        +GIS+ TEQWS F+SNIPAI EAILQMKR  KRSEHDA+  GA+S P   + PKFP ETIRFDGKNY  WAHQME LL+ LKIAYVLS+  PT++LG ES
Subjt:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPES

Query:  SSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLY-LCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAG
        SSGN ++SK +EQ+WMSDDHMC   ILNSLSD LF++Y+K+ MSA ELWKEL  LY L ++GT+RSQVKKYLEF+MVEEKSILEQVEELN+IA+SI SAG
Subjt:  SSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLY-LCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAG

Query:  MRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRS--------GGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTL
          IDEDFHVSAIISKLP SW NV++ LM+E +LP   L DRLR EE+LRTQ+NS  S         G+    NH  KMGD M  ++P RK+E + +VKTL
Subjt:  MRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRS--------GGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTL

Query:  LCLNCGKEGHISRDCPSSKI
        LCL+CGKEGH S +CP+ K+
Subjt:  LCLNCGKEGHISRDCPSSKI

A0A5D3DBA1 Zinc knuckle family protein, putative isoform 2

2.3e-106

65.62

Show/hide

Query:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPES
        +GIS+ TEQWS F+SNIPAI EAILQMKR  KRSEHDA+  GA+S P   + PKFP ETIRFDGKNY  WAHQME LL+ LKIAYVLS+  PT++LG ES
Subjt:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPES

Query:  SSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLY-LCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAG
        SSGN ++SK +EQ+WMSDDHMC   ILNSLSD LF++Y+K+ MSA ELWKEL  LY L ++GT+RSQVKKYLEF+MVEEKSILEQVEELN+IA+SI SAG
Subjt:  SSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLY-LCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAG

Query:  MRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRS--------GGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTL
          IDEDFHVSAIISKLP SW NV++ LM E +LP   L DRLR EE+LRTQ+NS  S         G+    NH  KMGD M  ++P RK+E + +VKTL
Subjt:  MRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRS--------GGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTL

Query:  LCLNCGKEGHISRDCPSSKI
        LCL+CGKEGH S +CP+ K+
Subjt:  LCLNCGKEGHISRDCPSSKI

A0A6J1G0Z2 uncharacterized protein LOC111449676

1.2e-171

99.03

Show/hide

Query:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPES
        +GISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWA QMEFLLRRLKIAYVLSDHRPTSMLGPES
Subjt:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPES

Query:  SSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGM
        SSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGM
Subjt:  SSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIISAGM

Query:  RIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEG
        RIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERP MNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEG
Subjt:  RIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTLLCLNCGKEG

Query:  HISRDCPSSK
        HISRDCPSSK
Subjt:  HISRDCPSSK

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

1.5e-09

22.05

Show/hide

Query:  FDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYG
        FDG+ Y +W  ++  LL    +  V+    P  +                +  W   +   +  I+  LSDS F  +    ++AR++ + L+++Y  +  
Subjt:  FDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYG

Query:  TRRSQV---KKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVF--VKLMREEHLPSVVLIDRLRNEE-KLRTQQN--S
        +  SQ+   K+ L  ++  E S+L      + +   +++AG +I+E   +S ++  LP  +  +   ++ + EE+L    + +RL ++E K++   N  S
Subjt:  TRRSQV---KKYLEFRMVEEKSILEQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVF--VKLMREEHLPSVVLIDRLRNEE-KLRTQQN--S

Query:  HRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVK-TLLCLNCGKEGHISRDC
         +        N+     +     +   K+ +K + K  + C +CG+EGHI +DC
Subjt:  HRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVK-TLLCLNCGKEGHISRDC

Arabidopsis top hits

e value

%identity

Alignment

AT4G00980.1 zinc knuckle (CCHC-type) family protein

7.6e-62

41.23

Show/hide

Query:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPT--SMLGP
        RG  L+T QWS  + N  AIE+ I Q + K+K SE   N   + +V    S      +  RFDGK+Y  WA QME  L++LK+ YVLS+  P+  S  GP
Subjt:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWAHQMEFLLRRLKIAYVLSDHRPT--SMLGP

Query:  ESSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYG-TRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIIS
        E++    +R+ A+ ++W+ DD++C   ++NSLSD L+ +Y+++   A+ELW EL  +Y CD   ++RSQV+KY+EFRMVEE+ ILEQV+  N IA+SI+S
Subjt:  ESSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYG-TRRSQVKKYLEFRMVEEKSILEQVEELNNIAESIIS

Query:  AGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPF-----MNHRRKMG--DQMSQSLPSRKREWKMDVKT
        AGM +DE FHVS IISK PPSW     +LM EE+LP  +L++R++ EE+L   +N  +    RP      M     +G   + SQS+  +++E + D + 
Subjt:  AGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPF-----MNHRRKMG--DQMSQSLPSRKREWKMDVKT

Query:  LL-CLNCGKEGHISRDCPSSKICQALRGLSKCEIKVLSDVSA
        ++ C NCG++GH+++ C  SK  +   G S    ++ S V+A
Subjt:  LL-CLNCGKEGHISRDCPSSKICQALRGLSKCEIKVLSDVSA

AT4G10920.1 transcriptional coactivator p15 (PC4) family protein (KELP)

2.5e-04

54.84

Show/hide

Query:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKI
        +GISLT EQWS F+ N+PAIE A+ +M+ ++
Subjt:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKI

AT4G10920.2 transcriptional coactivator p15 (PC4) family protein (KELP)

2.5e-04

54.84

Show/hide

Query:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKI
        +GISLT EQWS F+ N+PAIE A+ +M+ ++
Subjt:  RGISLTTEQWSAFRSNIPAIEEAILQMKRKI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTGTTGGAAAATTTCTGGGAACTCGATTCTCTTGTATCATGTGAGTTCTGTTAACTTCACTTACCTTCCCCCTCCCCCTCACCTGTTCTCTTTTGACCCTTTACTTTA
TGGCAGGGGAATCAGCTTGACAACTGAACAATGGTCTGCCTTTAGGAGTAATATTCCTGCTATAGAGGAAGCTATTTTGCAGATGAAAAGGAAAATAAAAAGATCTGAAC
ACGATGCTAATACAAGTGGTGCTGTCTCCGTACCTGCTACTGGGTCTGCTCCTAAATTTCCATCTGAAACTATTCGGTTTGATGGAAAAAACTACCGGGTTTGGGCACAC
CAGATGGAGTTTTTGCTGCGGCGCTTAAAGATTGCTTATGTACTTTCTGATCATCGTCCTACTTCCATGCTTGGACCGGAATCTAGCTCTGGAAATACCTCTCGATCCAA
GGCGTCTGAACAGGAATGGATGAGTGATGACCACATGTGTCGCCACATCATTCTGAACTCCCTCTCCGATAGTCTTTTTCATAAATACACGAAGAGAACAATGAGTGCCA
GAGAACTCTGGAAGGAGCTAAACTCACTTTATCTTTGTGATTATGGAACCAGAAGATCTCAAGTTAAAAAATATCTGGAATTCAGGATGGTCGAGGAGAAGTCAATATTA
GAACAAGTTGAAGAACTTAATAACATTGCTGAATCCATTATTTCAGCTGGAATGCGGATTGATGAGGATTTTCATGTTAGCGCCATTATTTCGAAGCTTCCACCCTCTTG
GACAAATGTCTTTGTGAAGTTAATGCGTGAGGAGCATCTTCCCTCTGTGGTGTTGATAGATCGATTGAGGAATGAAGAAAAACTACGTACACAGCAAAACTCACATCGCT
CAGGAGGCGAACGTCCTTTCATGAATCACAGGCGAAAAATGGGAGACCAAATGTCCCAAAGCCTACCGTCGAGGAAAAGGGAATGGAAAATGGATGTCAAAACTTTACTC
TGCTTGAATTGTGGCAAGGAAGGACACATATCTCGAGATTGTCCGAGTAGTAAAATCTGTCAAGCGCTTAGGGGGCTTTCAAAGTGCGAAATCAAGGTTCTAAGCGATGT
AAGTGCATAA

mRNA sequence

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Protein sequence

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MCWKISGNSILLYHVSSVNFTYLPPPPHLFSFDPLLYGRGISLTTEQWSAFRSNIPAIEEAILQMKRKIKRSEHDANTSGAVSVPATGSAPKFPSETIRFDGKNYRVWAH
QMEFLLRRLKIAYVLSDHRPTSMLGPESSSGNTSRSKASEQEWMSDDHMCRHIILNSLSDSLFHKYTKRTMSARELWKELNSLYLCDYGTRRSQVKKYLEFRMVEEKSIL
EQVEELNNIAESIISAGMRIDEDFHVSAIISKLPPSWTNVFVKLMREEHLPSVVLIDRLRNEEKLRTQQNSHRSGGERPFMNHRRKMGDQMSQSLPSRKREWKMDVKTLL
CLNCGKEGHISRDCPSSKICQALRGLSKCEIKVLSDVSA

Carg20899 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome