; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20910 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20910
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionserine/arginine-rich splicing factor RS31-like
Genome locationCarg_Chr06:6609890..6612809
RNA-Seq ExpressionCarg20910
SyntenyCarg20910
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR029537 - Arginine/serine-rich-splicing factor RSP31/31A
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597062.1 Serine/arginine-rich splicing factor RS31, partial [Cucurbita argyrosperma subsp. sororia]2.3e-113100Show/hide
Query:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQF
        SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQF
Subjt:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQF

Query:  ETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPE
        ETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPE
Subjt:  ETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPE

Query:  YGRYR
        YGRYR
Subjt:  YGRYR

KAG7028531.1 Serine/arginine-rich splicing factor RS31 [Cucurbita argyrosperma subsp. argyrosperma]8.2e-119100Show/hide
Query:  MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR
        MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR
Subjt:  MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR

Query:  RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPD
        RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPD
Subjt:  RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPD

Query:  YARNRSPEYGRYRR
        YARNRSPEYGRYRR
Subjt:  YARNRSPEYGRYRR

XP_022944508.1 serine/arginine-rich splicing factor RS31-like isoform X2 [Cucurbita moschata]3.8e-11696.38Show/hide
Query:  MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR
        MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR
Subjt:  MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR

Query:  RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPR-------
        RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPR       
Subjt:  RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPR-------

Query:  -ERRKSPDYARNRSPEYGRYR
         ERRKSPDYARNRSPEYGRYR
Subjt:  -ERRKSPDYARNRSPEYGRYR

XP_022974853.1 serine/arginine-rich splicing factor RS31-like isoform X2 [Cucurbita maxima]8.5e-11698.59Show/hide
Query:  MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR
        MCIS PIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR
Subjt:  MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR

Query:  RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPD
        RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYG PGDSPYRRSPSPLRRRPSPDYGP SPAYDRYNGPRERRKSPD
Subjt:  RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPD

Query:  YARNRSPEYGRYR
        YARNRSPEYGRYR
Subjt:  YARNRSPEYGRYR

XP_023539918.1 serine/arginine-rich splicing factor RS31-like isoform X2 [Cucurbita pepo subsp. pepo]5.0e-11698.59Show/hide
Query:  MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR
        MCIS  IFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR
Subjt:  MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR

Query:  RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPD
        RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRR AYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPD
Subjt:  RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPD

Query:  YARNRSPEYGRYR
        YARNRSPEYGRYR
Subjt:  YARNRSPEYGRYR

TrEMBL top hitse value%identityAlignment
A0A6J1FY41 serine/arginine-rich splicing factor RS31-like isoform X21.9e-11696.38Show/hide
Query:  MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR
        MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR
Subjt:  MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR

Query:  RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPR-------
        RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPR       
Subjt:  RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPR-------

Query:  -ERRKSPDYARNRSPEYGRYR
         ERRKSPDYARNRSPEYGRYR
Subjt:  -ERRKSPDYARNRSPEYGRYR

A0A6J1FYP8 serine/arginine-rich splicing factor RS31-like isoform X11.8e-11196.24Show/hide
Query:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQF
        SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQF
Subjt:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQF

Query:  ETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPR--------ERRKSPD
        ETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPR        ERRKSPD
Subjt:  ETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPR--------ERRKSPD

Query:  YARNRSPEYGRYR
        YARNRSPEYGRYR
Subjt:  YARNRSPEYGRYR

A0A6J1IBE0 serine/arginine-rich splicing factor RS31-like isoform X16.2e-11299.02Show/hide
Query:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQF
        SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQF
Subjt:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQF

Query:  ETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPE
        ETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYG PGDSPYRRSPSPLRRRPSPDYGP SPAYDRYNGPRERRKSPDYARNRSPE
Subjt:  ETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPE

Query:  YGRYR
        YGRYR
Subjt:  YGRYR

A0A6J1ICY3 serine/arginine-rich splicing factor RS31-like7.3e-11399.51Show/hide
Query:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQF
        SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQF
Subjt:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQF

Query:  ETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPE
        ETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYG PGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPE
Subjt:  ETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPE

Query:  YGRYR
        YGRYR
Subjt:  YGRYR

A0A6J1IIR9 serine/arginine-rich splicing factor RS31-like isoform X24.1e-11698.59Show/hide
Query:  MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR
        MCIS PIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR
Subjt:  MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIR

Query:  RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPD
        RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYG PGDSPYRRSPSPLRRRPSPDYGP SPAYDRYNGPRERRKSPD
Subjt:  RNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPD

Query:  YARNRSPEYGRYR
        YARNRSPEYGRYR
Subjt:  YARNRSPEYGRYR

SwissProt top hitse value%identityAlignment
F4JHI7 Serine/arginine-rich splicing factor SR34B3.1e-0429.46Show/hide
Query:  GFAFVYFEDERDADDAIRGLDNMPF----------------GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGK
        G+AFV FED RDADDAI G D   F                 HD R       RG RG    G +     R ++   V++  P     +D++ H    G+
Subjt:  GFAFVYFEDERDADDAIRGLDNMPF----------------GHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGK

Query:  VLNVRI----RRNFSFVQFETQEEATKALECTHMSKIL--DRVVSVEYALRDDG---ERGDPYDDSPRRTAYGR-PGDSPYRRSPSPLRRRPSPDYGPRS
        V   ++    R     V + + E+   AL+ T        + V   EY  R D     RG  Y  S  R   GR P  S  R       R P      RS
Subjt:  VLNVRI----RRNFSFVQFETQEEATKALECTHMSKIL--DRVVSVEYALRDDG---ERGDPYDDSPRRTAYGR-PGDSPYRRSPSPLRRRPSPDYGPRS

Query:  PAYDRYNGPRERRKSPDYARNRSP
        PA      PR R +S   +R+ SP
Subjt:  PAYDRYNGPRERRKSPDYARNRSP

P92964 Serine/arginine-rich splicing factor RS315.6e-7069.95Show/hide
Query:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQF
        SG+AFVYFEDERDA+DAIR LDN PFG+++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINFDPI T+  DIE+HFEPYGKV NVRIRRNFSFVQF
Subjt:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQF

Query:  ETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDD-SPRRT---AYGRPGDSPYRRSPSPLR-RRPSPDYG-PRSPAYDRYNGPR--ERRKSPD
        ETQE+ATKALE T  SKILDRVVSVEYAL+DD ER D     SPRR+    Y R     Y R PSP + RRPSPDYG  RSP YDRY GP   ERR+SPD
Subjt:  ETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDD-SPRRT---AYGRPGDSPYRRSPSPLR-RRPSPDYG-PRSPAYDRYNGPR--ERRKSPD

Query:  YARNRSPEYGRYR
        Y R RS +YGR R
Subjt:  YARNRSPEYGRYR

P92965 Serine/arginine-rich splicing factor RS403.4e-5153.15Show/hide
Query:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERG---RHRDGS-KSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFS
        +GFAFVY EDERDA+DAIR LD   FG   RRL VEW + ERG   R   GS +S ++ RP+KTLFVINFD  +TR RD+E+HFEPYGK++NVRIRRNF+
Subjt:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERG---RHRDGS-KSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFS

Query:  FVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRR-RPSPDYGPRSPAYDRYNGPRERRKSPDYAR
        F+Q+E QE+AT+AL+ ++ SK++D+V+SVEYA++DD  RG+ +    RR           RRSPSP +R R SPDYG  +     Y   R+ R SPDY R
Subjt:  FVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRR-RPSPDYGPRSPAYDRYNGPRERRKSPDYAR

Query:  NR-----------SPEYGRYRR
         R           SPEYGR RR
Subjt:  NR-----------SPEYGRYRR

P92966 Serine/arginine-rich splicing factor RS412.5e-4952.05Show/hide
Query:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSF
        +GFAFVY EDERDA+DAIR LD   +G   RRL VEW + +R   GR     +S +  RP+KTLFVINFD  +TR RD+ERHFEPYGK++NVRIRRNF+F
Subjt:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSF

Query:  VQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRR-RPSPDYG-PRSPAYDRYNGPRERRKSPDYAR
        +Q+E QE+AT+AL+ T+ SK++D+V+SVEYA++DD  RG+ Y    RR           RRSPSP RR R SPDYG   SP        +  R SPDY R
Subjt:  VQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRR-RPSPDYG-PRSPAYDRYNGPRERRKSPDYAR

Query:  NR-----------SPEYGR
         R           SP+Y R
Subjt:  NR-----------SPEYGR

Q9ZPX8 Serine/arginine-rich splicing factor RS31A1.5e-6769.34Show/hide
Query:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSF
        SG+AFVYFEDERDA+DAIR  DN  FG+ RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFVINFDPI TR RD+ERHFEPYGKVLNVR+RRNF+F
Subjt:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSF

Query:  VQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPL-RRRPSPDY-GPRSPAYDRYNGPR--ERRKSPDY
        VQF TQE+ATKAL+ TH SK+LD+VVSVEYALR+ GER D Y  S R            RRSPSP+ RRRPSPDY   RSP YDRY GP   ERRKSPDY
Subjt:  VQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPL-RRRPSPDY-GPRSPAYDRYNGPR--ERRKSPDY

Query:  ARNRSPEYGRYR
         R RS +YGR R
Subjt:  ARNRSPEYGRYR

Arabidopsis top hitse value%identityAlignment
AT2G46610.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-6869.34Show/hide
Query:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSF
        SG+AFVYFEDERDA+DAIR  DN  FG+ RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFVINFDPI TR RD+ERHFEPYGKVLNVR+RRNF+F
Subjt:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSF

Query:  VQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPL-RRRPSPDY-GPRSPAYDRYNGPR--ERRKSPDY
        VQF TQE+ATKAL+ TH SK+LD+VVSVEYALR+ GER D Y  S R            RRSPSP+ RRRPSPDY   RSP YDRY GP   ERRKSPDY
Subjt:  VQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPL-RRRPSPDY-GPRSPAYDRYNGPR--ERRKSPDY

Query:  ARNRSPEYGRYR
         R RS +YGR R
Subjt:  ARNRSPEYGRYR

AT2G46610.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-6968.18Show/hide
Query:  MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNV
        M  SL I +G+AFVYFEDERDA+DAIR  DN  FG+ RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFVINFDPI TR RD+ERHFEPYGKVLNV
Subjt:  MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNV

Query:  RIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPL-RRRPSPDY-GPRSPAYDRYNGPR--
        R+RRNF+FVQF TQE+ATKAL+ TH SK+LD+VVSVEYALR+ GER D Y  S R            RRSPSP+ RRRPSPDY   RSP YDRY GP   
Subjt:  RIRRNFSFVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPL-RRRPSPDY-GPRSPAYDRYNGPR--

Query:  ERRKSPDYARNRSPEYGRYR
        ERRKSPDY R RS +YGR R
Subjt:  ERRKSPDYARNRSPEYGRYR

AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.0e-7169.95Show/hide
Query:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQF
        SG+AFVYFEDERDA+DAIR LDN PFG+++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINFDPI T+  DIE+HFEPYGKV NVRIRRNFSFVQF
Subjt:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQF

Query:  ETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDD-SPRRT---AYGRPGDSPYRRSPSPLR-RRPSPDYG-PRSPAYDRYNGPR--ERRKSPD
        ETQE+ATKALE T  SKILDRVVSVEYAL+DD ER D     SPRR+    Y R     Y R PSP + RRPSPDYG  RSP YDRY GP   ERR+SPD
Subjt:  ETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDD-SPRRT---AYGRPGDSPYRRSPSPLR-RRPSPDYG-PRSPAYDRYNGPR--ERRKSPD

Query:  YARNRSPEYGRYR
        Y R RS +YGR R
Subjt:  YARNRSPEYGRYR

AT4G25500.1 arginine/serine-rich splicing factor 352.4e-5253.15Show/hide
Query:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERG---RHRDGS-KSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFS
        +GFAFVY EDERDA+DAIR LD   FG   RRL VEW + ERG   R   GS +S ++ RP+KTLFVINFD  +TR RD+E+HFEPYGK++NVRIRRNF+
Subjt:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERG---RHRDGS-KSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFS

Query:  FVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRR-RPSPDYGPRSPAYDRYNGPRERRKSPDYAR
        F+Q+E QE+AT+AL+ ++ SK++D+V+SVEYA++DD  RG+ +    RR           RRSPSP +R R SPDYG  +     Y   R+ R SPDY R
Subjt:  FVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRR-RPSPDYGPRSPAYDRYNGPRERRKSPDYAR

Query:  NR-----------SPEYGRYRR
         R           SPEYGR RR
Subjt:  NR-----------SPEYGRYRR

AT4G25500.4 arginine/serine-rich splicing factor 352.4e-5253.15Show/hide
Query:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERG---RHRDGS-KSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFS
        +GFAFVY EDERDA+DAIR LD   FG   RRL VEW + ERG   R   GS +S ++ RP+KTLFVINFD  +TR RD+E+HFEPYGK++NVRIRRNF+
Subjt:  SGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERG---RHRDGS-KSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFS

Query:  FVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRR-RPSPDYGPRSPAYDRYNGPRERRKSPDYAR
        F+Q+E QE+AT+AL+ ++ SK++D+V+SVEYA++DD  RG+ +    RR           RRSPSP +R R SPDYG  +     Y   R+ R SPDY R
Subjt:  FVQFETQEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRR-RPSPDYGPRSPAYDRYNGPRERRKSPDYAR

Query:  NR-----------SPEYGRYRR
         R           SPEYGR RR
Subjt:  NR-----------SPEYGRYRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCATCAGTCTTCCCATATTTTCAGGTTTTGCTTTTGTTTACTTTGAAGACGAGAGGGATGCTGATGATGCTATTCGTGGCCTTGATAACATGCCATTTGGTCATGA
TAGACGCAGATTGTCTGTGGAATGGGCTAGGGGTGAACGGGGTCGTCATCGTGATGGATCCAAGTCGATGGCAAATCAGAGGCCAACCAAAACCTTGTTTGTGATCAATT
TCGACCCTATTCATACTAGAGTTCGTGATATTGAAAGACATTTTGAACCTTATGGGAAGGTCCTCAATGTTCGCATAAGAAGGAACTTTTCATTTGTACAATTTGAGACG
CAGGAGGAGGCAACCAAAGCCCTTGAGTGTACCCACATGAGCAAAATATTAGACAGGGTTGTGTCAGTTGAGTATGCTTTGAGGGATGATGGTGAGAGGGGTGACCCTTA
TGATGATAGCCCCCGGAGAACAGCATATGGGCGGCCTGGGGATAGTCCTTACCGGAGGTCACCTAGTCCGTTGCGCCGTCGACCAAGTCCTGACTATGGGCCACGCAGCC
CTGCTTATGACAGGTATAATGGCCCTCGTGAACGACGCAAGAGTCCTGATTATGCTCGGAATCGAAGCCCTGAATATGGCAGATACCGCAGGTAA
mRNA sequenceShow/hide mRNA sequence
AGGGCTCTTCAAAAAGATACAGGTTTTCTCTTCCTCTTCCTCTTCCTCTCTCCTAGGGTTTTTCTTCTGTTCGAGTCCAAGAATCTGCAAGCGCGTTTGATAGTATCAAC
GATGAAGCCGATATTTGTTGGGAATTTTGGGTATGACACCCGGCAATCTGAGCTGGAGCGGGCATTCGCCAAATATGGGAGGGTCGATAGGATCGACATGAAATCTGGAA
TTTCTACTAAGGAAAATGAACCAAGCTCCTATCTGGGCTCATCACCATCTGTGCATAAAAATTAATTTGGAAGGAAACTTCCTGCTTGCCTGCTTAGCTTCATCTAAAGA
TATCATCATCCTGATTTTTCTTCAATCAATCATTCGTCATTCATCTACCTCTTCACTTAAGTTGCAATACACCAGAATCGTCTTAATGGATTGATCTTTATCTCATGCCA
CATCAATTAAGTCGCAATTCATCAGAATCGTCTTAATGGATGTTCTATATCTCATGCCTTGCCTACCTATCACCTCTGATCATAGGACATCACTGAATTCTGGTCATGCC
TTCCATTTGATAATAGTGGCTGAATGAATCTGTCTTGCCATGCCTTCCATTTCTGAACTCGTGCTGTGTGAAAGGCGAAGCATGGTTGAAATTTTGGATTAAAACCTTTA
GTATGCAACCATCTTATTTCATCATGCAACGTCTCTACAGCTAAATGTGCATCAGTCTTCCCATATTTTCAGGTTTTGCTTTTGTTTACTTTGAAGACGAGAGGGATGCT
GATGATGCTATTCGTGGCCTTGATAACATGCCATTTGGTCATGATAGACGCAGATTGTCTGTGGAATGGGCTAGGGGTGAACGGGGTCGTCATCGTGATGGATCCAAGTC
GATGGCAAATCAGAGGCCAACCAAAACCTTGTTTGTGATCAATTTCGACCCTATTCATACTAGAGTTCGTGATATTGAAAGACATTTTGAACCTTATGGGAAGGTCCTCA
ATGTTCGCATAAGAAGGAACTTTTCATTTGTACAATTTGAGACGCAGGAGGAGGCAACCAAAGCCCTTGAGTGTACCCACATGAGCAAAATATTAGACAGGGTTGTGTCA
GTTGAGTATGCTTTGAGGGATGATGGTGAGAGGGGTGACCCTTATGATGATAGCCCCCGGAGAACAGCATATGGGCGGCCTGGGGATAGTCCTTACCGGAGGTCACCTAG
TCCGTTGCGCCGTCGACCAAGTCCTGACTATGGGCCACGCAGCCCTGCTTATGACAGGTATAATGGCCCTCGTGAACGACGCAAGAGTCCTGATTATGCTCGGAATCGAA
GCCCTGAATATGGCAGATACCGCAGGTAA
Protein sequenceShow/hide protein sequence
MCISLPIFSGFAFVYFEDERDADDAIRGLDNMPFGHDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIHTRVRDIERHFEPYGKVLNVRIRRNFSFVQFET
QEEATKALECTHMSKILDRVVSVEYALRDDGERGDPYDDSPRRTAYGRPGDSPYRRSPSPLRRRPSPDYGPRSPAYDRYNGPRERRKSPDYARNRSPEYGRYRR