; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20937 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20937
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger CCCH domain-containing protein 62-like
Genome locationCarg_Chr20:11304982..11305678
RNA-Seq ExpressionCarg20937
SyntenyCarg20937
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571408.1 Zinc finger CCCH domain-containing protein 62, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3297.53Show/hide
Query:  FTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA
        F +LWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA
Subjt:  FTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA

KAG7011173.1 hypothetical protein SDJN02_27971, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-49100Show/hide
Query:  MSDLVSDHKCKPMTNIAEFSSSFVCFTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNA
        MSDLVSDHKCKPMTNIAEFSSSFVCFTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNA
Subjt:  MSDLVSDHKCKPMTNIAEFSSSFVCFTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNA

Query:  VRRHPA
        VRRHPA
Subjt:  VRRHPA

XP_022927980.1 zinc finger CCCH domain-containing protein 62-like [Cucurbita moschata]3.8e-3296.3Show/hide
Query:  FTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA
        F +LWNDEAERVQVLAEKHKRGAAARGVRALQKRKRK+VQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA
Subjt:  FTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA

XP_022971662.1 zinc finger CCCH domain-containing protein 62 isoform X1 [Cucurbita maxima]3.9e-2988.89Show/hide
Query:  FTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA
        F +LWNDEAER+QVLAEKHKRGAAARGVRALQKRKRK++Q+GGSGKNQG  QLPRQA NSNGSRKSMRSRDKNNAVRRHPA
Subjt:  FTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA

XP_023512636.1 zinc finger CCCH domain-containing protein 62 [Cucurbita pepo subsp. pepo]5.5e-3193.83Show/hide
Query:  FTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA
        F +LWNDEAERVQVLAEKHKRGAAARGVRALQKRKRK+VQ+GGSGKNQGHVQLPRQA NSNGSRKSMRSRDKNNAVRRHPA
Subjt:  FTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA

TrEMBL top hitse value%identityAlignment
A0A1S3C6H5 zinc finger CCCH domain-containing protein 62-like isoform X52.6e-1868.35Show/hide
Query:  FTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRH
        F +LWNDEAERVQVLAEKH+RGAAAR +RA+QK+KRK++Q  G  KNQGHV L RQ   S   R+ M SRD NNAVRRH
Subjt:  FTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRH

A0A1S4E1T6 zinc finger CCCH domain-containing protein 62-like isoform X41.3e-1769.74Show/hide
Query:  LWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRH
        LWNDEAERVQVLAEKH+RGAAAR +RA+QK+KRK++Q  G  KNQGHV L RQ   S   R+ M SRD NNAVRRH
Subjt:  LWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRH

A0A1S4E2I3 zinc finger CCCH domain-containing protein 62-like isoform X22.6e-1868.35Show/hide
Query:  FTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRH
        F +LWNDEAERVQVLAEKH+RGAAAR +RA+QK+KRK++Q  G  KNQGHV L RQ   S   R+ M SRD NNAVRRH
Subjt:  FTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRH

A0A6J1EQD5 zinc finger CCCH domain-containing protein 62-like1.8e-3296.3Show/hide
Query:  FTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA
        F +LWNDEAERVQVLAEKHKRGAAARGVRALQKRKRK+VQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA
Subjt:  FTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA

A0A6J1I2K8 zinc finger CCCH domain-containing protein 62 isoform X11.9e-2988.89Show/hide
Query:  FTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA
        F +LWNDEAER+QVLAEKHKRGAAARGVRALQKRKRK++Q+GGSGKNQG  QLPRQA NSNGSRKSMRSRDKNNAVRRHPA
Subjt:  FTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGATCTTGTCTCTGATCATAAATGCAAGCCAATGACCAATATTGCTGAGTTTTCTTCATCATTTGTATGTTTTACTCAGCTTTGGAATGATGAAGCTGAAAGAGT
TCAGGTTCTAGCAGAGAAGCACAAAAGAGGTGCGGCTGCTCGGGGTGTACGAGCATTGCAGAAAAGGAAAAGAAAAGTTGTACAAATGGGAGGAAGTGGAAAGAATCAAG
GACATGTTCAACTTCCAAGACAAGCCTCGAACAGTAACGGGAGTCGCAAGAGTATGCGTTCAAGGGACAAGAACAATGCTGTTCGTAGGCACCCAGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAGATCTTGTCTCTGATCATAAATGCAAGCCAATGACCAATATTGCTGAGTTTTCTTCATCATTTGTATGTTTTACTCAGCTTTGGAATGATGAAGCTGAAAGAGT
TCAGGTTCTAGCAGAGAAGCACAAAAGAGGTGCGGCTGCTCGGGGTGTACGAGCATTGCAGAAAAGGAAAAGAAAAGTTGTACAAATGGGAGGAAGTGGAAAGAATCAAG
GACATGTTCAACTTCCAAGACAAGCCTCGAACAGTAACGGGAGTCGCAAGAGTATGCGTTCAAGGGACAAGAACAATGCTGTTCGTAGGCACCCAGCGTAGGAAGACAGA
ATGGACATCGAAAAATATAGTGGTCTGCTCTTGAGCTTACAAATGGCCTTTGAACTTGCGTTACAAATTGCTCTTTTAAGTTTGAAAAGGAATCAGTGAATAACTATTCA
AATAATGTAACCAAAATTGACTTCAAAGTAGCAGGAAAAGTCAAAACAGGCATTTAGGTTCGTTTGTAAATGTAATTAGCCTTTACTTTCACGATATCTTGTGATAAAAT
AAGGTTTTAAATGAATTTAATTAGATATCTCATATATTAAATTC
Protein sequenceShow/hide protein sequence
MSDLVSDHKCKPMTNIAEFSSSFVCFTQLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA