; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20945 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20945
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionupstream activation factor subunit UAF30-like
Genome locationCarg_Chr20:11184916..11192155
RNA-Seq ExpressionCarg20945
SyntenyCarg20945
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR014876 - DEK, C-terminal
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011165.1 UAF30 [Cucurbita argyrosperma subsp. argyrosperma]8.4e-162100Show/hide
Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV
        MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV

Query:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN
        DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN

Query:  DDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDPSDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK
        DDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDPSDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK
Subjt:  DDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDPSDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK

XP_022928098.1 upstream activation factor subunit UAF30-like [Cucurbita moschata]2.2e-15488.17Show/hide
Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV
        MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDH 
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV

Query:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN
        DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALF VDSINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN

Query:  D--------------------------------------DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP
        D                                      DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP
Subjt:  D--------------------------------------DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP

Query:  SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK
        SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK
Subjt:  SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK

XP_022971720.1 upstream activation factor subunit spp27-like [Cucurbita maxima]6.1e-15286.69Show/hide
Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV
        MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDND H 
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV

Query:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN
         EKGK GSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN

Query:  D--------------------------------------DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP
        D                                      DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGE++LSRSDVVKRMWDYIKQNNLQDP
Subjt:  D--------------------------------------DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP

Query:  SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK
        SDKRRVICDEKLKELFDV+SFHGFTVSKLLATHFVKTK
Subjt:  SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK

XP_023512445.1 upstream activation factor subunit spp27-like [Cucurbita pepo subsp. pepo]2.6e-15588.46Show/hide
Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV
        MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDH 
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV

Query:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN
        DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN

Query:  D--------------------------------------DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP
        D                                      DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP
Subjt:  D--------------------------------------DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP

Query:  SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK
        SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK
Subjt:  SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK

XP_038901460.1 upstream activation factor subunit spp27-like isoform X1 [Benincasa hispida]9.1e-14081.25Show/hide
Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV
        MVSDSELI RLREFLR+SDLN TTTAIVRRKLEE FG+DLSDKKRFIREQVD+FLQTEHER  EEG GDCEE DQE GDENLKTEE+DGDSEDGDNDD  
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV

Query:  DEKGKTGSNKLA---KKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPL
        DEKGK GSNKL+   KKRGGGGFSKLCSLSPQLQEFIG PEMARTEVVKQLWNHIRG NLQDPSNRRNILCD+SLKALF V+SINMFQMNKALSKHIWPL
Subjt:  DEKGKTGSNKLA---KKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPL

Query:  ESND---------------------------------DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDPSD
        ESND                                 DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGE AL RSDVVKRMWDYIKQNNLQDPSD
Subjt:  ESND---------------------------------DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDPSD

Query:  KRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK
        KRR+ICDE+LKELFDV+SFHGFTVSKLLATHF+KTK
Subjt:  KRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK

TrEMBL top hitse value%identityAlignment
A0A0A0LJW7 Uncharacterized protein3.9e-12876.28Show/hide
Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV
        MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKK FIREQVDLFLQTEHE+  +EG   CEE  QEDGDENLK E EDGDSEDGDND+  
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV

Query:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN
        DEKGKT S K+ K+  GGGF+KLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN

Query:  D---------------------------------DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDPSDKRR
        D                                 DSDDSARE+KRQKKGKSGFLAPL LS+ALV FLGTGE AL RSDVVKRMWDYIKQNNLQDPSDKRR
Subjt:  D---------------------------------DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDPSDKRR

Query:  VICDEKLKELFDVESFHGFTVSKLLATHFVKTK
        +ICDE+LKELFDV+SF+GFTVSKLLATHF+K K
Subjt:  VICDEKLKELFDVESFHGFTVSKLLATHFVKTK

A0A1S3C766 upstream activation factor subunit UAF30-like6.4e-13178.68Show/hide
Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV
        MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKKRFIREQVDLFLQTEHE+  EEG G CEE +QEDGDENLK E EDGDSEDGDNDD  
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV

Query:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN
        DEKGKT S+K AKKR GGGFSKLCSLSPQLQEFIG  EMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN

Query:  D---------------------------------DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDPSDKRR
        D                                 DSDDSARE+KRQKKGKSGFLAPL LSDALV FLGTGE AL RSDVVKRMWDYIKQNNLQDPSDKRR
Subjt:  D---------------------------------DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDPSDKRR

Query:  VICDEKLKELFDVESFHGFTVSKLLATHFVKTK
        +ICDE+LKELFDV+SF+GFTVSKLLATHF+K K
Subjt:  VICDEKLKELFDVESFHGFTVSKLLATHFVKTK

A0A6J1EMX5 upstream activation factor subunit UAF30-like1.1e-15488.17Show/hide
Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV
        MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDH 
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV

Query:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN
        DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALF VDSINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN

Query:  D--------------------------------------DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP
        D                                      DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP
Subjt:  D--------------------------------------DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP

Query:  SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK
        SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK
Subjt:  SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK

A0A6J1I6I7 upstream activation factor subunit spp27-like2.9e-15286.69Show/hide
Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV
        MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDND H 
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV

Query:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN
         EKGK GSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN

Query:  D--------------------------------------DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP
        D                                      DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGE++LSRSDVVKRMWDYIKQNNLQDP
Subjt:  D--------------------------------------DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP

Query:  SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK
        SDKRRVICDEKLKELFDV+SFHGFTVSKLLATHFVKTK
Subjt:  SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK

A0A6J1KZW6 upstream activation factor subunit UAF30-like isoform X28.6e-12877.44Show/hide
Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV
        MVSDSELI RLRE LR+SDLN TTTAIVRRKLEE + +DLSDKK+FIREQVDLFL TEH+R +EE GG C+E DQEDGD+N K EEEDG SEDGDN D  
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHV

Query:  DEKGKTGSNKLAK--KRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLE
        D K KTGSN++ K  K+ GGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIR  NLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPLE
Subjt:  DEKGKTGSNKLAK--KRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLE

Query:  SND----------------------------DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDPSDKRRVIC
        SND                            DSD S RE KRQKKGKSGFLAPLQLSDALVTFLGTGE+ALSRS+VVKRMWDYIKQNNLQDPSDKRR+IC
Subjt:  SND----------------------------DSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDPSDKRRVIC

Query:  DEKLKELFDVESFHGFTVSKLLATHFVK
        DEKLKELFDV+SF+GFTVSKLLATHFVK
Subjt:  DEKLKELFDVESFHGFTVSKLLATHFVK

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp279.8e-1229.83Show/hide
Query:  LREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHVDEKGKTGSNK
        +++ L   D    +   VR+ LEE   VDLS  K+ +   +           E+E       A +  G    +   E+G           ++  + G  K
Subjt:  LREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHVDEKGKTGSNK

Query:  LAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALS
          +       +K   LSP+L EF+G+ +++R + VK+LW +I+ ++LQDP+++R ILCD+ LK++F VD+++MF MNK L+
Subjt:  LAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALS

Q05024 Protein TRI11.7e-0831.79Show/hide
Query:  VRRKLEEYFGVDLSDKKRFIREQV-DLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHVDEKGKTGS-NKLAKKRGGGGFSKLCS
        VR+ L+  + V+L  +++ I E + + F   +          D    DQE      K EE    S           KGK+ S +K  KK+     S   S
Subjt:  VRRKLEEYFGVDLSDKKRFIREQV-DLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHVDEKGKTGS-NKLAKKRGGGGFSKLCS

Query:  -----LSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESNDDSDDSAREEKRQKK
             LS  LQ+F+G  E+ RT+VVK +W +I+ ++LQ+P +RR ILCDE ++ +F    + MF MNK L+KH++      + D+  + E+ QK+
Subjt:  -----LSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESNDDSDDSAREEKRQKK

Q08747 Upstream activation factor subunit UAF308.3e-1131.16Show/hide
Query:  SELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHVDEKG
        S +ID L   L D DL   TT  VR  L+E + +D+  + + I + +   L    ER   E     E+  +E+    ++  +E   S+    ++  D   
Subjt:  SELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHVDEKG

Query:  KTGSNKLAKKRGGGGFSKL----CSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN
        +T    + KK+G    S +     +LS  L   +G  E+ RTEVV++LW +I+ +NLQ+P+N++ ILCDE L+ L    S NMF+M+K L+ H+   +  
Subjt:  KTGSNKLAKKRGGGGFSKL----CSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN

Query:  DDSDDSAREEKRQKK
         D     +E +R++K
Subjt:  DDSDDSAREEKRQKK

Q91FL8 Putative SWIB domain-containing protein 306R1.7e-0828.74Show/hide
Query:  GFSKLCSLSPQLQEFIGV--PEM-ARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESNDDSDDSAREEKRQKK
        G  KL  ++  L +F+G    EM +R +V K +  H+    LQ+  N++ I+CD  L  L R++  N  +    +  H+  L     S+ +    +   K
Subjt:  GFSKLCSLSPQLQEFIGV--PEM-ARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESNDDSDDSAREEKRQKK

Query:  GKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDPSDKRRVICDEKLKELFDVESFHGFTVS
            +    + S ++ T      S +S  DV K   DYI++N+L+D  +KR++I D+ LK LF   SF  +  S
Subjt:  GKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDPSDKRRVICDEKLKELFDVESFHGFTVS

Q9SD34 Zinc finger CCCH domain-containing protein 449.5e-0734.38Show/hide
Query:  RVDSINMFQMNKALSKHIWPLESNDDSDDSAREEKRQKKGKSGFL--APLQLSDA------LVTFLGTGE-SALSRSDVVKRMWDYIKQNNLQDPSDKRR
        +V+S N    N+AL   +   +    SD      K   K  S  L  AP   S A       V+F+  G+ S LS+ DV   + DYIK+ NL+DP  K +
Subjt:  RVDSINMFQMNKALSKHIWPLESNDDSDDSAREEKRQKKGKSGFL--APLQLSDA------LVTFLGTGE-SALSRSDVVKRMWDYIKQNNLQDPSDKRR

Query:  VICDEKLKELFDVESFHGFTVSKLLATH
        V+CD+ L +LF  +    F + KLL +H
Subjt:  VICDEKLKELFDVESFHGFTVSKLLATH

Arabidopsis top hitse value%identityAlignment
AT1G49520.1 SWIB complex BAF60b domain-containing protein5.2e-6947.11Show/hide
Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEH--EREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDD
        MVSDS+L+ +LRE LR SDL  TT A VRR+LE YFGV+L+DKK F+REQ+D FL+++   E + E+   DC      +GD+N        D E  +NDD
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEH--EREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDD

Query:  HVDEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPL-
              KT     AKKR GGGF+K+C LSPQL++F+G  ++ARTEVVK++W +IR ++LQDP+NRRNILCDESL +LFRV +INMFQMNKAL+KHIW L 
Subjt:  HVDEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPL-

Query:  -------------------------------------ESNDDSDDSAREEKRQ-----------KKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR
                                             ES ++ D S R+ KR+           KK   GF     LS  L  F GT +  L+R++VVK 
Subjt:  -------------------------------------ESNDDSDDSAREEKRQ-----------KKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR

Query:  MWDYIKQNNLQDPSDKRRVICDEKLKELFDVESFHGFTVSKLLATH
        +W YIK+NNLQDPSDKR +ICDE L+ LF VES + F ++K LA H
Subjt:  MWDYIKQNNLQDPSDKRRVICDEKLKELFDVESFHGFTVSKLLATH

AT2G35605.1 SWIB/MDM2 domain superfamily protein1.8e-1343.96Show/hide
Query:  KTGSNKLAKK-RGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFR-VDSINMFQMNKALSKH
        K  S+  AK  R G G  K+  +S  L  FIG  E++RT  VK++W +I+ NNLQ+P N+R ILCDE LK +F   D++   +++K LS+H
Subjt:  KTGSNKLAKK-RGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFR-VDSINMFQMNKALSKH

AT3G03590.1 SWIB/MDM2 domain superfamily protein7.4e-1544.9Show/hide
Query:  SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDPSDKRRVICDEKLKELFDVESFHGF-TVSKLLATHFVKT
        SD  A++  R     +G      +S  L  FLGTGE+  SR+D +K +W YIK ++LQ+P+DKR + CDE LK +F+ +   GF  +SKLL+ HFVKT
Subjt:  SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDPSDKRRVICDEKLKELFDVESFHGF-TVSKLLATHFVKT

AT3G19080.1 SWIB complex BAF60b domain-containing protein1.5e-6838.83Show/hide
Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTE------------------HEREEEEGGGDCEEADQE------
        MVSD +L+ RLRE L  SDLN  T A VRR+LE  FGVDL+DKK +IR+Q+D FL++                    E + E  GGD E+ D +      
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTE------------------HEREEEEGGGDCEEADQE------

Query:  ----------------------------------------------------------------------------------------------DGD---
                                                                                                      DGD   
Subjt:  ----------------------------------------------------------------------------------------------DGD---

Query:  ENLKTEEED----GDSEDGDNDDHVDE-------------------KGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNN
         ++K E+ED    G  + G+  + V+E                   K    S +  K++GGGGF+K+CSLSP+LQ F GV E+ARTEVVK LW +I+ NN
Subjt:  ENLKTEEED----GDSEDGDNDDHVDE-------------------KGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNN

Query:  LQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN-----------------DDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGES
        LQDP+++R+I+CDES ++LF V+SINMFQMNK L+KHIWPLE N                 +   DS    ++ KK K   LAPL LSDALV FLG GE+
Subjt:  LQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESN-----------------DDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGES

Query:  ALSRSDVVKRMWDYIKQNNLQDPSDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK
        +LSR+DVVKR+W+YI  N+LQDPSDKRRVICDEKLKELF+V+SF   +VSKLL  HF+K +
Subjt:  ALSRSDVVKRMWDYIKQNNLQDPSDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK

AT4G22360.1 SWIB complex BAF60b domain-containing protein4.6e-4139.45Show/hide
Query:  SEDGDNDDHVDEKGKTGSNKLAKKRGG-GGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKA
        S  G+    V++  K  +    K++GG GG +K+C +SP+L+  +G P + RTE+V+QLW +IR NNLQDPSN+R I+CD++L+ +F  D  +MF+MNK 
Subjt:  SEDGDNDDHVDEKGKTGSNKLAKKRGG-GGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKA

Query:  LSKHIWPLESNDDSDDSAREEKRQKKGKSGFLAPLQ---------LSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDPSDKRRVICDEKLKELFDV
        L+KHI PL+ + DS   A++ K + + K+    P+          LS+ L  F GTGE+ ++  ++++R+W+YIK NNL+DP +   + CDEKL++L   
Subjt:  LSKHIWPLESNDDSDDSAREEKRQKKGKSGFLAPLQ---------LSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDPSDKRRVICDEKLKELFDV

Query:  ESFHGFTVSKLLATHFVK
        ES     ++++L  H  K
Subjt:  ESFHGFTVSKLLATHFVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCCGACTCGGAGCTCATCGACCGGCTCCGAGAGTTTCTTCGGGATTCCGACCTCAATATCACCACCACTGCTATTGTCCGCCGGAAGCTTGAGGAGTACTTTGG
CGTTGATTTGTCCGATAAGAAGCGGTTTATTAGGGAACAGGTGGACTTGTTCCTCCAGACTGAGCATGAGAGAGAGGAGGAAGAAGGTGGCGGCGACTGTGAGGAAGCCG
ACCAGGAGGATGGAGATGAAAATTTGAAGACGGAAGAGGAAGATGGAGATAGTGAAGACGGAGATAACGACGACCACGTTGATGAAAAGGGTAAAACGGGTTCTAACAAG
CTTGCGAAGAAAAGAGGAGGGGGTGGTTTTAGCAAGCTATGTAGCCTTTCTCCTCAACTTCAGGAATTTATAGGAGTTCCTGAAATGGCAAGGACTGAGGTTGTGAAGCA
ACTATGGAACCACATTAGAGGGAACAATTTGCAAGACCCCAGTAATAGAAGAAATATTCTCTGTGATGAATCGTTAAAGGCACTCTTTCGTGTTGATTCCATCAACATGT
TTCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCTTTGGAATCAAACGACGATTCAGATGACTCTGCAAGAGAGGAAAAGCGGCAAAAGAAAGGGAAATCTGGTTTT
CTTGCTCCTCTTCAACTTTCAGATGCTCTGGTGACATTTCTTGGTACCGGAGAGAGTGCATTGTCTCGCTCTGATGTAGTGAAAAGAATGTGGGATTACATAAAGCAAAA
TAACCTTCAGGACCCTTCTGACAAAAGGAGAGTAATTTGTGACGAGAAGCTAAAGGAACTCTTCGATGTCGAGTCCTTTCACGGCTTCACCGTTTCGAAACTCCTGGCCA
CTCATTTTGTAAAGACAAAATAG
mRNA sequenceShow/hide mRNA sequence
CCAATCTCCCGTCTGTTCTTCACGCAAAGTCTTTTTTCCTGTTCGAAACCAAAGCCAAGACAAAGCCACACACCACACGCCACGGATAGTGTGCCCTCAACTCCAAATCC
TACCCTCCTATCATCGATTGTTCTTCCTTCAATCTGCGAGGTTTTGCTCTGCTTCGAATAAGATTGTGGATTTCAACAATGGTTTCCGACTCGGAGCTCATCGACCGGCT
CCGAGAGTTTCTTCGGGATTCCGACCTCAATATCACCACCACTGCTATTGTCCGCCGGAAGCTTGAGGAGTACTTTGGCGTTGATTTGTCCGATAAGAAGCGGTTTATTA
GGGAACAGGTGGACTTGTTCCTCCAGACTGAGCATGAGAGAGAGGAGGAAGAAGGTGGCGGCGACTGTGAGGAAGCCGACCAGGAGGATGGAGATGAAAATTTGAAGACG
GAAGAGGAAGATGGAGATAGTGAAGACGGAGATAACGACGACCACGTTGATGAAAAGGGTAAAACGGGTTCTAACAAGCTTGCGAAGAAAAGAGGAGGGGGTGGTTTTAG
CAAGCTATGTAGCCTTTCTCCTCAACTTCAGGAATTTATAGGAGTTCCTGAAATGGCAAGGACTGAGGTTGTGAAGCAACTATGGAACCACATTAGAGGGAACAATTTGC
AAGACCCCAGTAATAGAAGAAATATTCTCTGTGATGAATCGTTAAAGGCACTCTTTCGTGTTGATTCCATCAACATGTTTCAAATGAATAAAGCTCTATCAAAGCATATT
TGGCCTTTGGAATCAAACGACGATTCAGATGACTCTGCAAGAGAGGAAAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGCTCCTCTTCAACTTTCAGATGCTCTGGT
GACATTTCTTGGTACCGGAGAGAGTGCATTGTCTCGCTCTGATGTAGTGAAAAGAATGTGGGATTACATAAAGCAAAATAACCTTCAGGACCCTTCTGACAAAAGGAGAG
TAATTTGTGACGAGAAGCTAAAGGAACTCTTCGATGTCGAGTCCTTTCACGGCTTCACCGTTTCGAAACTCCTGGCCACTCATTTTGTAAAGACAAAATAG
Protein sequenceShow/hide protein sequence
MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHVDEKGKTGSNK
LAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESNDDSDDSAREEKRQKKGKSGF
LAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDPSDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK