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Carg20948 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20948
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionjasmonic acid-amido synthetase JAR1-like isoform X3
Genome locationCarg_Chr14:14598814..14599248
RNA-Seq ExpressionCarg20948
SyntenyCarg20948
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A6J1E9G0 jasmonic acid-amido synthetase JAR1-like isoform X17.6e-0454.55Show/hide
Query:  INVNPCCPLN-ATFRCIPNIDTFEFIPLKQNGSQDRNRRERRRNKPVRLTEVKDQVKSTEKVVTNL
        +NVNP  P   ATF  IPNI  FEFIPLK N +QD+ +   + NKPV LTEVK   +  E VVTN+
Subjt:  INVNPCCPLN-ATFRCIPNIDTFEFIPLKQNGSQDRNRRERRRNKPVRLTEVKDQVKSTEKVVTNL
A0A6J1E9N9 jasmonic acid-amido synthetase JAR1-like isoform X27.6e-0454.55Show/hide
Query:  INVNPCCPLN-ATFRCIPNIDTFEFIPLKQNGSQDRNRRERRRNKPVRLTEVKDQVKSTEKVVTNL
        +NVNP  P   ATF  IPNI  FEFIPLK N +QD+ +   + NKPV LTEVK   +  E VVTN+
Subjt:  INVNPCCPLN-ATFRCIPNIDTFEFIPLKQNGSQDRNRRERRRNKPVRLTEVKDQVKSTEKVVTNL
A0A6J1EFH9 jasmonic acid-amido synthetase JAR1-like isoform X37.6e-0454.55Show/hide
Query:  INVNPCCPLN-ATFRCIPNIDTFEFIPLKQNGSQDRNRRERRRNKPVRLTEVKDQVKSTEKVVTNL
        +NVNP  P   ATF  IPNI  FEFIPLK N +QD+ +   + NKPV LTEVK   +  E VVTN+
Subjt:  INVNPCCPLN-ATFRCIPNIDTFEFIPLKQNGSQDRNRRERRRNKPVRLTEVKDQVKSTEKVVTNL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATTAATGTTAACCCATGTTGCCCCCTGAATGCCACCTTTCGCTGTATTCCAAACATTGATACGTTCGAGTTCATCCCGCTAAAGCAAAATGGCTCACAAGACAG
GAACAGGAGGGAGCGCAGGAGAAACAAGCCGGTTCGTCTGACCGAAGTCAAAGATCAGGTGAAGAGTACCGAAAAAGTTGTCACCAATTTAATTCCTTCCAATTATGACA
TTATATACGACCTTGCCTTTTCAAAGATATCCACAAGTGGTCTGACCGAAGCTGTTTATTACGGTCATTGCAGGCTGACCGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAATTAATGTTAACCCATGTTGCCCCCTGAATGCCACCTTTCGCTGTATTCCAAACATTGATACGTTCGAGTTCATCCCGCTAAAGCAAAATGGCTCACAAGACAG
GAACAGGAGGGAGCGCAGGAGAAACAAGCCGGTTCGTCTGACCGAAGTCAAAGATCAGGTGAAGAGTACCGAAAAAGTTGTCACCAATTTAATTCCTTCCAATTATGACA
TTATATACGACCTTGCCTTTTCAAAGATATCCACAAGTGGTCTGACCGAAGCTGTTTATTACGGTCATTGCAGGCTGACCGTTTAG
Protein sequenceShow/hide protein sequence
MPINVNPCCPLNATFRCIPNIDTFEFIPLKQNGSQDRNRRERRRNKPVRLTEVKDQVKSTEKVVTNLIPSNYDIIYDLAFSKISTSGLTEAVYYGHCRLTV