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Carg20997 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20997
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr14:14343523..14344388
RNA-Seq ExpressionCarg20997
SyntenyCarg20997
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582615.1 U-box domain-containing protein 33, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2671.13Show/hide
Query:  RSQKLFNCSIKTAGVIELQKNDCKPQPTIALPASCLNFSSIKFGGSRFFFHESANRDKRRSRKLERGARKFESTVLFAHIADSLAPKTNDSSYRSKR
        R++   N   KT    ++ +N            SCLNFSSIKFGGSRFFFHESANRDKRRSRKLERGARKFESTVLFAHIADSLAPKTNDSSYRSKR
Subjt:  RSQKLFNCSIKTAGVIELQKNDCKPQPTIALPASCLNFSSIKFGGSRFFFHESANRDKRRSRKLERGARKFESTVLFAHIADSLAPKTNDSSYRSKR
KAG7019009.1 hypothetical protein SDJN02_20886, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-67100Show/hide
Query:  MPGLRRKNGDRTEIAGLVYLQPHLIELLSAGRLRSQKLFNCSIKTAGVIELQKNDCKPQPTIALPASCLNFSSIKFGGSRFFFHESANRDKRRSRKLERG
        MPGLRRKNGDRTEIAGLVYLQPHLIELLSAGRLRSQKLFNCSIKTAGVIELQKNDCKPQPTIALPASCLNFSSIKFGGSRFFFHESANRDKRRSRKLERG
Subjt:  MPGLRRKNGDRTEIAGLVYLQPHLIELLSAGRLRSQKLFNCSIKTAGVIELQKNDCKPQPTIALPASCLNFSSIKFGGSRFFFHESANRDKRRSRKLERG

Query:  ARKFESTVLFAHIADSLAPKTNDSSYRSKRY
        ARKFESTVLFAHIADSLAPKTNDSSYRSKRY
Subjt:  ARKFESTVLFAHIADSLAPKTNDSSYRSKRY
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGGATTGAGGAGGAAGAACGGAGATAGAACTGAGATCGCAGGCCTTGTTTATCTTCAGCCGCATTTGATTGAACTACTCTCAGCGGGAAGACTGAGAAGCCAAAA
ACTCTTCAACTGTTCGATCAAAACTGCAGGCGTGATCGAGCTACAGAAGAACGATTGTAAACCGCAACCAACAATCGCTTTGCCTGCATCTTGTTTGAACTTCAGCTCGA
TCAAATTTGGAGGTTCTCGTTTCTTCTTCCACGAATCGGCGAATCGTGACAAGCGGCGAAGCAGAAAGCTCGAGAGAGGAGCGCGTAAATTCGAGAGCACCGTTCTCTTT
GCTCACATAGCTGATTCATTGGCGCCAAAGACAAACGACTCTTCTTACCGAAGTAAACGGTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTGGATTGAGGAGGAAGAACGGAGATAGAACTGAGATCGCAGGCCTTGTTTATCTTCAGCCGCATTTGATTGAACTACTCTCAGCGGGAAGACTGAGAAGCCAAAA
ACTCTTCAACTGTTCGATCAAAACTGCAGGCGTGATCGAGCTACAGAAGAACGATTGTAAACCGCAACCAACAATCGCTTTGCCTGCATCTTGTTTGAACTTCAGCTCGA
TCAAATTTGGAGGTTCTCGTTTCTTCTTCCACGAATCGGCGAATCGTGACAAGCGGCGAAGCAGAAAGCTCGAGAGAGGAGCGCGTAAATTCGAGAGCACCGTTCTCTTT
GCTCACATAGCTGATTCATTGGCGCCAAAGACAAACGACTCTTCTTACCGAAGTAAACGGTATTAG
Protein sequenceShow/hide protein sequence
MPGLRRKNGDRTEIAGLVYLQPHLIELLSAGRLRSQKLFNCSIKTAGVIELQKNDCKPQPTIALPASCLNFSSIKFGGSRFFFHESANRDKRRSRKLERGARKFESTVLF
AHIADSLAPKTNDSSYRSKRY