CuGenDBv2

Gene ID	Carg20998
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein PAIR1 isoform X1
Genome location	Carg_Chr14:14338313..14342802
RNA-Seq Expression	Carg20998
Synteny	Carg20998
Gene Ontology terms	GO:0009553 - embryo sac development (biological process) GO:0009555 - pollen development (biological process) GO:0042138 - meiotic DNA double-strand break formation (biological process) GO:0048236 - plant-type sporogenesis (biological process) GO:0051026 - chiasma assembly (biological process)
InterPro domains	IPR034546 - Protein PAIR1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6582614.1 putative recombination initiation defects 3, partial [Cucurbita argyrosperma subsp. sororia]

3.3e-159

91.34

Show/hide

Query:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLGSSLDFQLQQLIQTLLLASTWKSTPLPDSKCQVGEELDRRLGTIENS
        RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLGSSLDFQ+  L                 SKCQVGEELDRRLGTIENS
Subjt:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLGSSLDFQLQQLIQTLLLASTWKSTPLPDSKCQVGEELDRRLGTIENS

Query:  LNKFGKILDSLHSDILQLNKGMKQISLDV---------EGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFDVLSALEKQV
        LNKFGKILDSLHSDILQLNKGMKQISLDV         EGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFDVLSALEKQV
Subjt:  LNKFGKILDSLHSDILQLNKGMKQISLDV---------EGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFDVLSALEKQV

Query:  QASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEVRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSSVVKKEDPKKVIPFSE
        QASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEVRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSSVVKKEDPKKVIPFSE
Subjt:  QASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEVRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSSVVKKEDPKKVIPFSE

Query:  QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGDS
        QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGDS
Subjt:  QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGDS

KAG7019008.1 Protein PAIR1, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.9e-177

100

Show/hide

Query:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLGSSLDFQLQQLIQTLLLASTWKSTPLPDSKCQVGEELDRRLGTIENS
        RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLGSSLDFQLQQLIQTLLLASTWKSTPLPDSKCQVGEELDRRLGTIENS
Subjt:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLGSSLDFQLQQLIQTLLLASTWKSTPLPDSKCQVGEELDRRLGTIENS

Query:  LNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFDVLSALEKQVQASHLKLKN
        LNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFDVLSALEKQVQASHLKLKN
Subjt:  LNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFDVLSALEKQVQASHLKLKN

Query:  DFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEVRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSSVVKKEDPKKVIPFSEQCLVLEREY
        DFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEVRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSSVVKKEDPKKVIPFSEQCLVLEREY
Subjt:  DFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEVRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSSVVKKEDPKKVIPFSEQCLVLEREY

Query:  RVIVDSDEEIERSFSCLIEEKKTGDS
        RVIVDSDEEIERSFSCLIEEKKTGDS
Subjt:  RVIVDSDEEIERSFSCLIEEKKTGDS

XP_023526419.1 protein PAIR1-like isoform X1 [Cucurbita pepo subsp. pepo]

6.4e-147

82.86

Show/hide

Query:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQ----------VNLGSSL-------DFQLQQLIQTLLLASTWKSTPLPDSK
        R NALTTGQQAPQLRSQPSQQSFSLGLSSEH MYSQLSQNSFDEVVTNEQ          +   S         D QL     +  L   WKSTPLPDSK
Subjt:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQ----------VNLGSSL-------DFQLQQLIQTLLLASTWKSTPLPDSK

Query:  CQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFDV
        CQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMI+SSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQER+HEI DV
Subjt:  CQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFDV

Query:  LSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHS-------IQSPEVRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSS
        LSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHS       + +P+ + L    QPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSS
Subjt:  LSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHS-------IQSPEVRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSS

Query:  VVKKEDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD
        VVKKEDPKKVIPFSE QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG+
Subjt:  VVKKEDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD

XP_023526420.1 protein PAIR1-like isoform X2 [Cucurbita pepo subsp. pepo]

2.6e-148

83.09

Show/hide

Query:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQ----------VNLGSSL-------DFQLQQLIQTLLLASTWKSTPLPDSK
        R NALTTGQQAPQLRSQPSQQSFSLGLSSEH MYSQLSQNSFDEVVTNEQ          +   S         D QL     +  L   WKSTPLPDSK
Subjt:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQ----------VNLGSSL-------DFQLQQLIQTLLLASTWKSTPLPDSK

Query:  CQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFDV
        CQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMI+SSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQER+HEI DV
Subjt:  CQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFDV

Query:  LSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHS-------IQSPEVRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSS
        LSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHS       + +P+ + L    QPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSS
Subjt:  LSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHS-------IQSPEVRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSS

Query:  VVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD
        VVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG+
Subjt:  VVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD

XP_038882642.1 putative recombination initiation defects 3 isoform X2 [Benincasa hispida]

3.6e-134

76.77

Show/hide

Query:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLG------------------SSLDFQLQQLIQTLLLASTWKSTPLPDS
        R NALTTGQQAPQLRSQPSQQSFS GLSS+H MYSQLSQNSFDEVVTNEQ                      S  D QL     +  L   WK TPLPDS
Subjt:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLG------------------SSLDFQLQQLIQTLLLASTWKSTPLPDS

Query:  KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFD
        KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKM+V+SS LQSMNK+HDDMKATLDGGFKLIS+QLK DAYQERL+EI +
Subjt:  KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFD

Query:  VLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPE----------VRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAF
        VLS+LEKQVQAS LKLKNDFISTFTQE+ AMVCTLK PL+KFPPHSIQSPE           R   K  Q ASPNVCIRAT VQ EEVGRWKSVKV K F
Subjt:  VLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPE----------VRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAF

Query:  CTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD
        CT SV KK+DPKKVIPFSEQ LVLEREYRVIVDSDEEIERSFSCLIEEKKTG+
Subjt:  CTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AV35 protein PAIR1 isoform X2

3.4e-130

75.07

Show/hide

Query:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLG------------------SSLDFQLQQLIQTLLLASTWKSTPLPDS
        RLNALTTGQQAPQLRSQPSQQSFS GLSS+H MYSQLSQNSFDEVVTNEQ                      S  D QL     +  L   W+ +PL DS
Subjt:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLG------------------SSLDFQLQQLIQTLLLASTWKSTPLPDS

Query:  KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFD
        KCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQ+SLDVE IWQKM+V+SSLLQSMNK+HDDMKA +DGGFKLISDQLK DAYQERLHEI D
Subjt:  KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFD

Query:  VLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPE----------VRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAF
         LS+LEKQVQAS LKLKNDFISTFT+EM AM+ TLKKPL+KFPPHSIQSPE           R   K  Q ASPNVC +ATAVQ EEVG WKSVKV KAF
Subjt:  VLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPE----------VRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAF

Query:  CTSSVVKKEDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
        CTSSVV ++DP KVIPFSE QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Subjt:  CTSSVVKKEDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG

A0A1S3AVJ5 protein PAIR1 isoform X3

1.4e-131

75.28

Show/hide

Query:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLG------------------SSLDFQLQQLIQTLLLASTWKSTPLPDS
        RLNALTTGQQAPQLRSQPSQQSFS GLSS+H MYSQLSQNSFDEVVTNEQ                      S  D QL     +  L   W+ +PL DS
Subjt:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLG------------------SSLDFQLQQLIQTLLLASTWKSTPLPDS

Query:  KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFD
        KCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQ+SLDVE IWQKM+V+SSLLQSMNK+HDDMKA +DGGFKLISDQLK DAYQERLHEI D
Subjt:  KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFD

Query:  VLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPE----------VRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAF
         LS+LEKQVQAS LKLKNDFISTFT+EM AM+ TLKKPL+KFPPHSIQSPE           R   K  Q ASPNVC +ATAVQ EEVG WKSVKV KAF
Subjt:  VLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPE----------VRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAF

Query:  CTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
        CTSSVV ++DP KVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Subjt:  CTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG

A0A1S4DSK1 protein PAIR1 isoform X1

4.5e-130

74.86

Show/hide

Query:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLG------------------SSLDFQLQQLIQTLLLASTWKSTPLPDS
        RLNALTTGQQAPQLRSQPSQQSFS GLSS+H MYSQLSQNSFDEVVTNEQ                      S  D QL     +  L   W+ +PL DS
Subjt:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLG------------------SSLDFQLQQLIQTLLLASTWKSTPLPDS

Query:  KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFD
        KCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQ+SLDVE IWQKM+V+SSLLQSMNK+HDDMKA +DGGFKLISDQLK DAYQERLHEI D
Subjt:  KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFD

Query:  VLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPE----------VRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAF
         LS+LEKQVQAS LKLKNDFISTFT+EM AM+ TLKKPL+KFPPHSIQSPE           R   K  Q ASPNVC +ATAVQ EEVG WKSVKV KAF
Subjt:  VLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPE----------VRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAF

Query:  CTSSVVKKEDPKKVIPFSE--QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
        CTSSVV ++DP KVIPFSE  QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Subjt:  CTSSVVKKEDPKKVIPFSE--QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG

A0A6J1FTV4 protein PAIR1 isoform X2

1.0e-129

Show/hide

Query:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLG------------------SSLDFQLQQLIQTLLLASTWKSTPLPDS
        R NALTTGQQAPQLRSQPSQQSFS GLSS H   SQ SQNSFDEVVTNEQ                      S  + QL     +  L   WKSTPLPDS
Subjt:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLG------------------SSLDFQLQQLIQTLLLASTWKSTPLPDS

Query:  KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFD
        KCQVGEELDRRLGTIENSLNKFGKILDSLH DIL LN+GMKQISLDVEGIWQK+IV+SSLLQSMNKEHDDMK+TLDGGFKLISDQLK DAYQERLHEI D
Subjt:  KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFD

Query:  VLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPE-------VRFLTKYC--QPASPNVCIRATAVQSEEVGRWKSVKVEKAFC
        VLSALEKQVQAS LKL+NDFISTFTQEM AMVCTLKKPL+KFP   I+SPE        +   + C  Q ASP+VCIRATAVQ+EEVGRWKSVKV K FC
Subjt:  VLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPE-------VRFLTKYC--QPASPNVCIRATAVQSEEVGRWKSVKVEKAFC

Query:  TSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD
        TS+V KKED KK IPFSEQ LV+EREYRVIVDSDEEIERSFSCLIEEKKTG+
Subjt:  TSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD

A0A6J1FY69 protein PAIR1 isoform X1

1.0e-129

Show/hide

Query:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLG------------------SSLDFQLQQLIQTLLLASTWKSTPLPDS
        R NALTTGQQAPQLRSQPSQQSFS GLSS H   SQ SQNSFDEVVTNEQ                      S  + QL     +  L   WKSTPLPDS
Subjt:  RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLG------------------SSLDFQLQQLIQTLLLASTWKSTPLPDS

Query:  KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFD
        KCQVGEELDRRLGTIENSLNKFGKILDSLH DIL LN+GMKQISLDVEGIWQK+IV+SSLLQSMNKEHDDMK+TLDGGFKLISDQLK DAYQERLHEI D
Subjt:  KCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFD

Query:  VLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPE-------VRFLTKYC--QPASPNVCIRATAVQSEEVGRWKSVKVEKAFC
        VLSALEKQVQAS LKL+NDFISTFTQEM AMVCTLKKPL+KFP   I+SPE        +   + C  Q ASP+VCIRATAVQ+EEVGRWKSVKV K FC
Subjt:  VLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPE-------VRFLTKYC--QPASPNVCIRATAVQSEEVGRWKSVKVEKAFC

Query:  TSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD
        TS+V KKED KK IPFSEQ LV+EREYRVIVDSDEEIERSFSCLIEEKKTG+
Subjt:  TSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD

SwissProt top hits

e value

%identity

Alignment

Q0WWX5 Putative recombination initiation defects 3

5.2e-35

31.23

Show/hide

Query:  QQAPQLRSQPSQQSFSLGLSSEH---SMYSQLSQNSFDEVVTNEQVNLGSSLDFQLQQLIQTL-----------LLAS--------TWKSTPLPDSKCQV
        Q + QLRSQ SQQSFS G SS       +SQ++Q+S DE++ N+Q       D  L+++   L           L+AS         W S  + +SK Q+
Subjt:  QQAPQLRSQPSQQSFSLGLSSEH---SMYSQLSQNSFDEVVTNEQVNLGSSLDFQLQQLIQTL-----------LLAS--------TWKSTPLPDSKCQV

Query:  GEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFDVLSA
         EEL++R G +E SL++FG +LDS+ SDI+Q N+G K++ L+ E I QK+ +  + LQ + KE  D KA+LDGG K I ++   D  QE+L +I  +L+ 
Subjt:  GEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFDVLSA

Query:  LEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKP------------------------------LKKFPPHSIQSP--------------EVRFLTKYCQ
        + +QV+ +  K++ +   TFT+E+  ++ +L+ P                                K P   +Q P               V     +C 
Subjt:  LEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKP------------------------------LKKFPPHSIQSP--------------EVRFLTKYCQ

Query:  ----------PASPN----VCIRATAVQSEEVGRWKSVKVEKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEE-IERSFSCLIEEKKTG
                  P +PN      ++       +VG WK+VK EK     S  KK   +K +  SE       +  V++DSDEE I+  FSCLI E   G
Subjt:  ----------PASPN----VCIRATAVQSEEVGRWKSVKVEKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEE-IERSFSCLIEEKKTG

Q75RY2 Protein PAIR1

1.4e-11

36.94

Show/hide

Query:  EELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLK-NDAYQERLHEIFDVLSA
        E+++R+   + +S++K G ++DS+ SD++QLN+ MK+ SLD   I QK+ V  S LQ + K  DD+KA      K   DQ    ++   +L+EI   L+ 
Subjt:  EELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLK-NDAYQERLHEIFDVLSA

Query:  LEKQVQASHLK
        L+ Q+QA  L+
Subjt:  LEKQVQASHLK

Arabidopsis top hits

e value

%identity

Alignment

AT1G01690.1 putative recombination initiation defects 3

3.7e-36

31.23

Show/hide

Query:  QQAPQLRSQPSQQSFSLGLSSEH---SMYSQLSQNSFDEVVTNEQVNLGSSLDFQLQQLIQTL-----------LLAS--------TWKSTPLPDSKCQV
        Q + QLRSQ SQQSFS G SS       +SQ++Q+S DE++ N+Q       D  L+++   L           L+AS         W S  + +SK Q+
Subjt:  QQAPQLRSQPSQQSFSLGLSSEH---SMYSQLSQNSFDEVVTNEQVNLGSSLDFQLQQLIQTL-----------LLAS--------TWKSTPLPDSKCQV

Query:  GEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFDVLSA
         EEL++R G +E SL++FG +LDS+ SDI+Q N+G K++ L+ E I QK+ +  + LQ + KE  D KA+LDGG K I ++   D  QE+L +I  +L+ 
Subjt:  GEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFDVLSA

Query:  LEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKP------------------------------LKKFPPHSIQSP--------------EVRFLTKYCQ
        + +QV+ +  K++ +   TFT+E+  ++ +L+ P                                K P   +Q P               V     +C 
Subjt:  LEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKP------------------------------LKKFPPHSIQSP--------------EVRFLTKYCQ

Query:  ----------PASPN----VCIRATAVQSEEVGRWKSVKVEKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEE-IERSFSCLIEEKKTG
                  P +PN      ++       +VG WK+VK EK     S  KK   +K +  SE       +  V++DSDEE I+  FSCLI E   G
Subjt:  ----------PASPN----VCIRATAVQSEEVGRWKSVKVEKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEE-IERSFSCLIEEKKTG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

AGGTTAAATGCGTTAACCACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCACAACAATCCTTTTCCCTGGGTCTGTCATCTGAGCACAGCATGTATTCTCAGCT
TTCTCAGAACTCGTTTGACGAAGTCGTGACAAATGAACAGGTCAATCTCGGCTCTTCTCTGGATTTCCAGCTTCAACAACTCATTCAAACTCTATTATTAGCTTCAACAT
GGAAATCAACTCCTCTTCCAGACTCTAAATGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGTACTATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCT
CTTCATAGTGATATTCTGCAATTGAACAAAGGAATGAAGCAAATTTCTCTCGATGTTGAAGGCATATGGCAAAAGATGATTGTTAGCAGTAGCTTGCTGCAATCCATGAA
CAAAGAACATGATGACATGAAAGCTACTCTTGATGGAGGCTTCAAATTAATATCCGATCAACTTAAGAACGATGCATACCAAGAAAGGCTACATGAGATATTCGATGTTC
TTTCTGCATTGGAAAAGCAAGTACAAGCATCTCACCTGAAATTAAAAAATGACTTCATCAGCACATTCACCCAAGAAATGAACGCAATGGTCTGTACCTTAAAGAAACCC
TTGAAGAAATTTCCACCTCACTCTATTCAATCTCCTGAGGTTCGGTTTCTTACTAAATATTGCCAACCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAG
CGAGGAAGTGGGAAGGTGGAAATCAGTAAAAGTGGAAAAGGCCTTTTGCACTAGTAGCGTGGTGAAAAAGGAAGATCCAAAGAAAGTAATTCCATTTTCTGAACAGTGCC
TGGTGCTGGAAAGGGAATATAGAGTTATTGTCGATTCCGATGAGGAGATCGAAAGAAGCTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGAAAATAAAGA
ACGACACTTCTAGATGGAGAAGATGTACGTTACTATTCCATTGAAGACGCCAAGGAAGAAACTGAAAGAATTTTAAGGAAAGCAAGAAGGCAGAAAAGAAAATATGGCAA
TCCTATAATTATTAATTGAAGGTACATTTCTGCTCATTAAATATCAATGCTTATATGTTCAGAAAGAATGATTCAAGATGTTAAAAATGAGACTTGCATTGGTAGGATTT
CCTGGAATCTTTACACCACATTCTATTGATGGAGGAAACTTTCGTTCTTCCTATTTTTCTATTTGTATCATGGAGATGTCAATAGATAATACATTTGTAGCTTGCAAGAT
TAATTTTTGGTGCACCACTTGAAATTTTGTCTTGTAGTCGTCTATCTCTTATGTATGGAACTATTCTCTGGTACTTTAAATTGCATCTATCCAGACCGTAGTCTGCCCTT
ACAAAAGAGATCGACCTTTGAGAAGTGCATTTCAGCCTACTCAAAATTTTATGCACTTTTTGTCTGGATGAAAAAAATTAGATTATTATAACTGTTGCCTGAAGAAGAAG
ACTGCCGGTGTAGGAACCAAGGCCTTTTAGACGTGAGAAAGAAAAGAGCTAGTATCCTATCCTTGTTGCATTCTTACCTCAGTCTTTTCCTAACGCCTGTAAGTCCAAGG
AAGAAAATATGATCTCAAAATTTGAAGTCCAGATATCGTACTTCAGTACAGACTTATGAACCGATCAGCTTTAATAGGACATGGCCTTCTTGTTGTCCTTGAATAATAAC
TATTTACAATTTGTTACATTCGAAAACCACTCTGCCAAGATGGCAGGAAAAAGATAGTATTAGTCTTAATTTTTCAATGC

Protein sequence

Show/hide protein sequence

RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLGSSLDFQLQQLIQTLLLASTWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDS
LHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKP
LKKFPPHSIQSPEVRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGDS

Carg20998 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome