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Carg21001 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21001
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr14:14322652..14323060
RNA-Seq ExpressionCarg21001
SyntenyCarg21001
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582613.1 Mediator of RNA polymerase II transcription subunit 12, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3195.89Show/hide
Query:  GSNRGTVVVVISVKLKSQSLQAPRPFFSLTEFRHFCALETVPFLFASFESHRQPLLYSLPEEPACCVEPGIRF
        GSNRGTVVVVISVKLKSQS QAPRPFFSLTEFRHFCALETVPF FASFESHRQPLLYSLPEEPACCVEPGIR+
Subjt:  GSNRGTVVVVISVKLKSQSLQAPRPFFSLTEFRHFCALETVPFLFASFESHRQPLLYSLPEEPACCVEPGIRF
KAG7019005.1 hypothetical protein SDJN02_20882, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-43100Show/hide
Query:  DHPHSFHYSITGSNRGTVVVVISVKLKSQSLQAPRPFFSLTEFRHFCALETVPFLFASFESHRQPLLYSLPEEPACCVEPGIRFFAKP
        DHPHSFHYSITGSNRGTVVVVISVKLKSQSLQAPRPFFSLTEFRHFCALETVPFLFASFESHRQPLLYSLPEEPACCVEPGIRFFAKP
Subjt:  DHPHSFHYSITGSNRGTVVVVISVKLKSQSLQAPRPFFSLTEFRHFCALETVPFLFASFESHRQPLLYSLPEEPACCVEPGIRFFAKP
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATCACCCCCACTCTTTCCATTATTCCATCACAGGGAGTAACAGAGGCACCGTCGTCGTCGTCATCAGCGTTAAGCTGAAGAGTCAAAGCCTTCAAGCCCCGAGACCCTT
CTTCTCCCTTACGGAATTCCGCCATTTTTGTGCTCTCGAAACTGTTCCCTTTTTGTTTGCGTCTTTTGAATCGCACAGACAACCTTTGCTCTATTCACTCCCGGAGGAAC
CGGCTTGCTGTGTCGAGCCTGGGATCAGGTTTTTCGCTAAACCCTAG
mRNA sequenceShow/hide mRNA sequence
GATCACCCCCACTCTTTCCATTATTCCATCACAGGGAGTAACAGAGGCACCGTCGTCGTCGTCATCAGCGTTAAGCTGAAGAGTCAAAGCCTTCAAGCCCCGAGACCCTT
CTTCTCCCTTACGGAATTCCGCCATTTTTGTGCTCTCGAAACTGTTCCCTTTTTGTTTGCGTCTTTTGAATCGCACAGACAACCTTTGCTCTATTCACTCCCGGAGGAAC
CGGCTTGCTGTGTCGAGCCTGGGATCAGGTTTTTCGCTAAACCCTAG
Protein sequenceShow/hide protein sequence
DHPHSFHYSITGSNRGTVVVVISVKLKSQSLQAPRPFFSLTEFRHFCALETVPFLFASFESHRQPLLYSLPEEPACCVEPGIRFFAKP