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Carg21003 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21003
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionC2 domain-containing protein
Genome locationCarg_Chr14:14306723..14308955
RNA-Seq ExpressionCarg21003
SyntenyCarg21003
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000008 - C2 domain
IPR035892 - C2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582612.1 Elicitor-responsive protein 3, partial [Cucurbita argyrosperma subsp. sororia]2.3e-4165.77Show/hide
Query:  MMLANGLRPNHVMMLSVIRAIDALSWDSMIEGCAWRSYPNGFYGGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLC
        MMLANGLRPNHVMMLSVIRAIDALSWDSMIE                                GSRAFYVMVECGNHEHRTKVSS               
Subjt:  MMLANGLRPNHVMMLSVIRAIDALSWDSMIEGCAWRSYPNGFYGGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLC

Query:  SVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSNESVGAI
            GKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSNESVGAI
Subjt:  SVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSNESVGAI

KAG7019003.1 hypothetical protein SDJN02_20880 [Cucurbita argyrosperma subsp. argyrosperma]9.2e-163100Show/hide
Query:  MMLANGLRPNHVMMLSVIRAIDALSWDSMIEGCAWRSYPNGFYGGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLC
        MMLANGLRPNHVMMLSVIRAIDALSWDSMIEGCAWRSYPNGFYGGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLC
Subjt:  MMLANGLRPNHVMMLSVIRAIDALSWDSMIEGCAWRSYPNGFYGGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLC

Query:  SVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSNESVGAINPPWWNNFRGIQKRIHRSSASSIQRRARGGRHLQGRNKDRIQIFHQSKIYI
        SVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSNESVGAINPPWWNNFRGIQKRIHRSSASSIQRRARGGRHLQGRNKDRIQIFHQSKIYI
Subjt:  SVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSNESVGAINPPWWNNFRGIQKRIHRSSASSIQRRARGGRHLQGRNKDRIQIFHQSKIYI

Query:  QNFIVSIRIVFLVSYCNLYTSSGRNSSDGSKRVHCRCEAGKEADLWQGYELVDKCMVKVIVPLWPQEFFQWSKTTVK
        QNFIVSIRIVFLVSYCNLYTSSGRNSSDGSKRVHCRCEAGKEADLWQGYELVDKCMVKVIVPLWPQEFFQWSKTTVK
Subjt:  QNFIVSIRIVFLVSYCNLYTSSGRNSSDGSKRVHCRCEAGKEADLWQGYELVDKCMVKVIVPLWPQEFFQWSKTTVK

XP_022979209.1 uncharacterized protein LOC111479016 isoform X1 [Cucurbita maxima]8.6e-4485.85Show/hide
Query:  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN
        GGILEVLLVNARDIKHTNLFGSRA+YVMVECGN EHRTKVSS          GLSLCSVDTGKHEKVCWNEKFSFE PSSDWKNITHIKFRIM+ KFLSN
Subjt:  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN

Query:  ESVGAI
        ESVGAI
Subjt:  ESVGAI

XP_023528824.1 uncharacterized protein LOC111791648 isoform X1 [Cucurbita pepo subsp. pepo]6.0e-4586.79Show/hide
Query:  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN
        GGILEV LVNARDIKHTNLFGSRA+YVMVECGNHEHRT+VSS          GLSLCSVDTGKHEKVCWNEKFSFE PSSDWKNITHIKFRIMQTKFLSN
Subjt:  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN

Query:  ESVGAI
        ESVGAI
Subjt:  ESVGAI

XP_023528829.1 uncharacterized protein LOC111791648 isoform X2 [Cucurbita pepo subsp. pepo]1.9e-3878.3Show/hide
Query:  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN
        GGILEV LVNARDIKHTNLFGSRA+YVMVECGNHEHRT+VSS                   GKHEKVCWNEKFSFE PSSDWKNITHIKFRIMQTKFLSN
Subjt:  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN

Query:  ESVGAI
        ESVGAI
Subjt:  ESVGAI

TrEMBL top hitse value%identityAlignment
A0A1S4DSI8 LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g565702.1e-3268.57Show/hide
Query:  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN
        GGILEVLLVNA+DI+HTN  GS A+YV VECGNHEHRTKVSS                   GKHE  CWNEKFSFE P+SDWKNITHIKFRIM+TK L+N
Subjt:  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN

Query:  ESVGA
        ESVGA
Subjt:  ESVGA

A0A1S4DSI8 LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g565707.2e-0483.87Show/hide
Query:  MMLANGLRPNHVMMLSVIRAIDALSWDSMIE
        MM +NG RPN+V MLSVIRAIDALSWDSMIE
Subjt:  MMLANGLRPNHVMMLSVIRAIDALSWDSMIE

A0A1S4DSI8 LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g565701.4e-3167.62Show/hide
Query:  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN
        GGILEVLLVNA+DI+HTN  GS A+YV VECGNHEHRTKVSS                   GKHE  CWNEKFSFE P+S WKNITHIKFRIM+TK L+N
Subjt:  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN

Query:  ESVGA
        ESVGA
Subjt:  ESVGA

A0A6J1E9R4 uncharacterized protein LOC1114319981.0e-2984.81Show/hide
Query:  MVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSNESVGAI
        MVECGNHEHRTKVSS          GLSLCSVDTGKHEKVCWNEKFSFE PSSDWKNITHIKFRIMQTKFLSNESVG I
Subjt:  MVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSNESVGAI

A0A6J1ISL7 uncharacterized protein LOC111479016 isoform X14.2e-4485.85Show/hide
Query:  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN
        GGILEVLLVNARDIKHTNLFGSRA+YVMVECGN EHRTKVSS          GLSLCSVDTGKHEKVCWNEKFSFE PSSDWKNITHIKFRIM+ KFLSN
Subjt:  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN

Query:  ESVGAI
        ESVGAI
Subjt:  ESVGAI

A0A6J1ISM2 uncharacterized protein LOC111479016 isoform X21.3e-3777.36Show/hide
Query:  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN
        GGILEVLLVNARDIKHTNLFGSRA+YVMVECGN EHRTKVSS                   GKHEKVCWNEKFSFE PSSDWKNITHIKFRIM+ KFLSN
Subjt:  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN

Query:  ESVGAI
        ESVGAI
Subjt:  ESVGAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G00467.1 Calcium-dependent lipid-binding (CaLB domain) family protein8.1e-1636.36Show/hide
Query:  GILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN
        GILEV L++A  I HTN  G+  +YV+++CG  E+R+K+S                    G ++   WN+KF F+FP S WK +T+IK RI+  +  ++
Subjt:  GILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTCGCAAATGGGCTCAGGCCAAATCATGTGATGATGCTGAGCGTAATAAGAGCTATTGATGCGTTAAGCTGGGATTCAATGATTGAAGGTTGTGCATGGAGGAG
TTATCCAAATGGGTTTTATGGTGGGATTCTTGAAGTGCTTCTTGTCAATGCCAGAGACATCAAACACACCAATCTGTTTGGTTCCCGGGCATTTTATGTGATGGTAGAAT
GTGGAAATCATGAACATAGAACAAAAGTATCATCAGGTTGGCTCCCCTCTGCCCTTTTCTCGTATGGGCTTTCACTATGTTCTGTGGACACAGGTAAACATGAGAAGGTT
TGTTGGAATGAGAAGTTTTCGTTTGAATTCCCTTCATCTGATTGGAAGAACATAACTCATATCAAATTCAGAATCATGCAAACAAAATTTCTGAGCAATGAATCTGTTGG
TGCAATAAATCCACCTTGGTGGAATAATTTCAGAGGGATACAAAAGAGGATTCATAGAAGTTCGGCCAGCTCCATACAACGTCGTGCTCGAGGAGGACGACACTTACAAG
GGAGAAATAAAGATAGGATTCAAATTTTTCACCAAAGTAAGATTTATATACAAAATTTCATTGTATCCATCAGAATAGTTTTTCTTGTAAGTTACTGCAATCTCTACACT
TCTTCAGGAAGAAATAGTTCAGATGGAAGCAAGAGAGTTCATTGCAGATGTGAAGCAGGAAAGGAAGCCGATCTATGGCAAGGTTATGAACTTGTGGACAAATGTATGGT
TAAAGTTATTGTGCCTCTTTGGCCACAAGAATTTTTCCAGTGGTCGAAAACAACAGTGAAATGA
mRNA sequenceShow/hide mRNA sequence
GACAGCCAGAATCTGTTTTTGCCTTCTTCAAGATGATGCTCGCAAATGGGCTCAGGCCAAATCATGTGATGATGCTGAGCGTAATAAGAGCTATTGATGCGTTAAGCTGG
GATTCAATGATTGAAGGTTGTGCATGGAGGAGTTATCCAAATGGGTTTTATGGTGGGATTCTTGAAGTGCTTCTTGTCAATGCCAGAGACATCAAACACACCAATCTGTT
TGGTTCCCGGGCATTTTATGTGATGGTAGAATGTGGAAATCATGAACATAGAACAAAAGTATCATCAGGTTGGCTCCCCTCTGCCCTTTTCTCGTATGGGCTTTCACTAT
GTTCTGTGGACACAGGTAAACATGAGAAGGTTTGTTGGAATGAGAAGTTTTCGTTTGAATTCCCTTCATCTGATTGGAAGAACATAACTCATATCAAATTCAGAATCATG
CAAACAAAATTTCTGAGCAATGAATCTGTTGGTGCAATAAATCCACCTTGGTGGAATAATTTCAGAGGGATACAAAAGAGGATTCATAGAAGTTCGGCCAGCTCCATACA
ACGTCGTGCTCGAGGAGGACGACACTTACAAGGGAGAAATAAAGATAGGATTCAAATTTTTCACCAAAGTAAGATTTATATACAAAATTTCATTGTATCCATCAGAATAG
TTTTTCTTGTAAGTTACTGCAATCTCTACACTTCTTCAGGAAGAAATAGTTCAGATGGAAGCAAGAGAGTTCATTGCAGATGTGAAGCAGGAAAGGAAGCCGATCTATGG
CAAGGTTATGAACTTGTGGACAAATGTATGGTTAAAGTTATTGTGCCTCTTTGGCCACAAGAATTTTTCCAGTGGTCGAAAACAACAGTGAAATGATATTATGTCGGGTC
GAAAACAACATTTTCGGTTTCTATTCGAGTTTTCTCCTTCGTAATAAAAAAGATGTCCGATGGATCATATTGCATTCAAAGAGTTATTATGGTTCTCCTATCAACACTAT
AGGGGTGAGAGGTCAAACATCGACCACTTTACAATGATACTCTATCCACTAATCAATACTCGAATTAGAACAGACAATCAATATCAATTCATAAGCAACTGATATTTGGT
CATTAGAAATTTATGTCCTTATTCTTTTTCAACAGATAAATTTGCATCATTCCATAATTCATATAATATAGTTTTTTTATAAATAATATTCATCATCCTCTTT
Protein sequenceShow/hide protein sequence
MMLANGLRPNHVMMLSVIRAIDALSWDSMIEGCAWRSYPNGFYGGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKV
CWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSNESVGAINPPWWNNFRGIQKRIHRSSASSIQRRARGGRHLQGRNKDRIQIFHQSKIYIQNFIVSIRIVFLVSYCNLYT
SSGRNSSDGSKRVHCRCEAGKEADLWQGYELVDKCMVKVIVPLWPQEFFQWSKTTVK