CuGenDBv2

Gene ID	Carg21007
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	UvrABC system protein A
Genome location	Carg_Chr14:14288797..14291070
RNA-Seq Expression	Carg21007
Synteny	Carg21007
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008438057.1 PREDICTED: uncharacterized protein LOC103483279 [Cucumis melo]

2.2e-29

91.03

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDN
        MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILS ESSIKGFIFGSNNQSQ  Q EKLGSNGVKDN
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDN

XP_011650756.1 uncharacterized protein LOC105434815 [Cucumis sativus]

2.9e-29

91.03

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDN
        MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILS ESSIKGFIFGSNNQSQ  Q EKLGSNGVKDN
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDN

XP_022147242.1 uncharacterized protein LOC111016239 [Momordica charantia]

4.1e-31

92.41

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDNP
        MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPI+KFILS ESS+KGFIFGSNNQSQ SQ EKLGSNGVKD P
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDNP

XP_022924545.1 uncharacterized protein LOC111431996 [Cucurbita moschata]

1.8e-34

100

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDNP
        MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDNP
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDNP

XP_038906565.1 uncharacterized protein LOC120092525 [Benincasa hispida]

4.5e-30

91.14

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDNP
        MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILS ESS+KGFIFGSN  SQ SQ+EKLGSNGVKDNP
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDNP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7H0 Uncharacterized protein

1.4e-29

91.03

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDN
        MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILS ESSIKGFIFGSNNQSQ  Q EKLGSNGVKDN
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDN

A0A1S3AW35 uncharacterized protein LOC103483279

1.1e-29

91.03

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDN
        MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILS ESSIKGFIFGSNNQSQ  Q EKLGSNGVKDN
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDN

A0A6J1D1U5 uncharacterized protein LOC111016239

2.0e-31

92.41

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDNP
        MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPI+KFILS ESS+KGFIFGSNNQSQ SQ EKLGSNGVKD P
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDNP

A0A6J1EFB9 uncharacterized protein LOC111431996

8.6e-35

100

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDNP
        MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDNP
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDNP

A0A6J1IWD0 uncharacterized protein LOC111479819

8.6e-35

100

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDNP
        MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDNP
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDNP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G01725.1 unknown protein

1.8e-13

53.23

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Query:  VNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQ
        +NP+ +K+++ T++VAT   SYFLLTADYGP+PN LDPI++ ILS + S+K FIF S    +
Subjt:  VNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQ

AT4G00530.1 unknown protein

4.2e-18

61.54

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Query:  VNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQ
        +NP+TDK++RRTTMVAT  ASYFLLT DYGP+PN LDPIK+ IL+ + S+K FIFG   +  G +
Subjt:  VNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQ

Sequences

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CDS sequence

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ATGGTGAATCCGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCCTCATACTTTCTCTTAACCGCCGATTATGGCCCTCAACCCAATTTTCT
CGATCCTATCAAAAAGTTTATACTGTCAACAGAAAGTTCTATTAAGGGTTTCATCTTTGGATCAAATAATCAATCTCAAGGAAGTCAAAGTGAGAAGCTTGGCTCCAATG
GTGTCAAGGACAATCCATGA

mRNA sequence

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TCTTCTCCGTCGAAATGGTGAATCCGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCCTCATACTTTCTCTTAACCGCCGATTATGGCCCT
CAACCCAATTTTCTCGATCCTATCAAAAAGTTTATACTGTCAACAGAAAGTTCTATTAAGGGTTTCATCTTTGGATCAAATAATCAATCTCAAGGAAGTCAAAGTGAGAA
GCTTGGCTCCAATGGTGTCAAGGACAATCCATGATGCGTAGACTCGAGGATTTGGTTACGGTTTTATGCATACATATCTTGAATCTGCAGTTTTTGTTTATACATTTCGT
GAAGCGTAGGTCGAGATCAAGCATGAGTATACCTCTTGGAGGAGACGAATAATGCAGTTTGTTAGATTCAAAGGTGTCGAATGAATTTGTTATTACCAACTTCATTTAGC
ATCTTAACCTCAAGAGATTCGAAGTACTTCGCATATTTTGGGATTGCTATGATATCACATCAAGTGGTTCTGAACTCCGGTAGAAAAAATGAACATTGCTCTGATTTAGG
AACTTTAGAAGTGAAATGTGTGAGTCAGCCCAAGACCCCCACGGGAACGTGTTTTAAAACCGTGAGACTGACGGTGATACGTAACGAGTCAAAATGGACAATATTTGTTA
ACGTTGGGTTTGAGCTATTACAATTTTCCTATTCTATAC

Protein sequence

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MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDNP

Carg21007 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome