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Carg21014 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21014
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionarabinogalactan peptide 23-like
Genome locationCarg_Chr09:8197861..8198052
RNA-Seq ExpressionCarg21014
SyntenyCarg21014
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025661.1 Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-1895.24Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
        MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASA LPALGSLVGASLVS VA+YFN
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
XP_022933008.1 arabinogalactan peptide 23-like [Cucurbita moschata]7.5e-20100Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
        MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
XP_022960230.1 arabinogalactan peptide 23-like [Cucurbita moschata]5.4e-1893.65Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
        MEMKKIACAALFAAAT+TAVVASDESLSPAAAPGPSSAASA LPALGSLVGASLVS VA+YFN
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
XP_023004714.1 arabinogalactan peptide 23-like [Cucurbita maxima]8.3e-1996.83Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
        MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASA LPALGSLVGASLVS VAYYFN
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
XP_023528634.1 arabinogalactan peptide 23 [Cucurbita pepo subsp. pepo]6.6e-1688.89Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
        MEMK IACAALFAAA VTAVVASDESLSPAAAPGPSSAASA LPALGSL+GASLVS VAY  N
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
TrEMBL top hitse value%identityAlignment
A0A0A0L9U8 Uncharacterized protein6.9e-1175.41Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYY
        MEMKKIACA LFAAATVTAVVA+DE+L+P  APGPSS A   +PA+GSLVGASL+S  AYY
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYY
A0A6J1F3F5 arabinogalactan peptide 23-like3.6e-20100Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
        MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
A0A6J1H8I1 arabinogalactan peptide 23-like2.6e-1893.65Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
        MEMKKIACAALFAAAT+TAVVASDESLSPAAAPGPSSAASA LPALGSLVGASLVS VA+YFN
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
A0A6J1IYE9 arabinogalactan peptide 23-like1.7e-1484.13Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
        MEMK IAC ALF AA VTAVVASDES SPAAAPGPSSAASA LPALGSL+GASLVS VAY  N
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
A0A6J1KX42 arabinogalactan peptide 23-like4.0e-1996.83Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
        MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASA LPALGSLVGASLVS VAYYFN
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 231.2e-1271.43Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
        MEMKKIAC  LFAAA++TAV+A++E  +P  APGP+SAASA LPALGSLVGASLVSL +YY +
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)1.2e-1065.62Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGP-SSAASATLPALGSLVGASLVSLVAYYFN
        MEMKKIAC  +FAAA++TAV+A++     A APGP +S AS  +PALGSLVGASLVSL AYY N
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGP-SSAASATLPALGSLVGASLVSLVAYYFN
AT3G57690.1 arabinogalactan protein 238.6e-1471.43Show/hide
Query:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN
        MEMKKIAC  LFAAA++TAV+A++E  +P  APGP+SAASA LPALGSLVGASLVSL +YY +
Subjt:  MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGAAGAAGATCGCCTGCGCCGCCCTCTTCGCCGCCGCTACTGTCACTGCAGTCGTGGCTTCCGATGAGTCTCTCTCTCCCGCCGCCGCTCCAGGGCCGAGCAG
CGCCGCCTCCGCCACTCTTCCCGCCCTTGGATCGCTCGTCGGCGCCTCGCTTGTTTCCTTGGTCGCCTACTACTTCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGAAGAAGATCGCCTGCGCCGCCCTCTTCGCCGCCGCTACTGTCACTGCAGTCGTGGCTTCCGATGAGTCTCTCTCTCCCGCCGCCGCTCCAGGGCCGAGCAG
CGCCGCCTCCGCCACTCTTCCCGCCCTTGGATCGCTCGTCGGCGCCTCGCTTGTTTCCTTGGTCGCCTACTACTTCAACTGA
Protein sequenceShow/hide protein sequence
MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAYYFN