CuGenDBv2

Gene ID	Carg21028
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Genome location	Carg_Chr13:1060293..1060706
RNA-Seq Expression	Carg21028
Synteny	Carg21028
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6583459.1 hypothetical protein SDJN03_19391, partial [Cucurbita argyrosperma subsp. sororia]

5.5e-68

99.27

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Query:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL
        MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL
Subjt:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAMSAQPSV
        GIVFGITFAV LAMGVYYVLRTRQANANRAMSAQPSV
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAMSAQPSV

KAG7019217.1 hypothetical protein SDJN02_18175, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-68

100

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Query:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL
        MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL
Subjt:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAMSAQPSV
        GIVFGITFAVFLAMGVYYVLRTRQANANRAMSAQPSV
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAMSAQPSV

XP_008457527.1 PREDICTED: uncharacterized protein LOC103497198 [Cucumis melo]

2.3e-61

91.24

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Query:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL
        MT+MLTFLFCLSSFTFLS+A+A+GRAPHGLVYESPVAFSPMAYDFFHPSTQ PN KDPCG SKCSPLPLAAQVQSTPA+ESKYSTTIQ   HRVGAGGIL
Subjt:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAMS-AQPS
        GIVFGITFAVFLAMGVYYVLRTRQANANRAMS AQPS
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAMS-AQPS

XP_011657962.2 uncharacterized protein LOC105435923 [Cucumis sativus]

5.0e-61

91.24

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Query:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL
        MT+MLTFLFCL+SFTFLSIAQA+GRAPHGLVYESPVAFSPMAYDFFHPSTQ P+ KDPCG SKCSPLPLAAQVQSTPAKESKYSTTIQ   HRVGAGGIL
Subjt:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAMS-AQPS
        GIVFGITFAVFL MGVYYVLRTRQANANRAMS AQPS
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAMS-AQPS

XP_038876402.1 uncharacterized protein LOC120068840 [Benincasa hispida]

6.1e-59

90.84

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Query:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL
        MT+MLTFLFCL+SFTFLSIA+A+GRAPHGLVYESPVAFSPMAYDFFHPSTQ PN KD CG SKCSPLPLAAQVQSTPA+ESKYSTTIQKG HRVGAGGIL
Subjt:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAM
        GIVFGITFAVFLAMGVYYVL TRQANANRA+
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LV85 Uncharacterized protein

7.1e-61

90.51

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Query:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL
        MT+MLTFLFCL+SFTFLSIA+A+GRAPHGLVYESPVAFSPMAYDFFHPSTQ P+ KDPCG SKCSPLPLAAQVQSTPAKESKYSTTIQ   HRVGAGGIL
Subjt:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAMS-AQPS
        GIVFGITFAVFL MGVYYVLRTRQANANRAMS AQPS
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAMS-AQPS

A0A1S3C6E2 uncharacterized protein LOC103497198

1.1e-61

91.24

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Query:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL
        MT+MLTFLFCLSSFTFLS+A+A+GRAPHGLVYESPVAFSPMAYDFFHPSTQ PN KDPCG SKCSPLPLAAQVQSTPA+ESKYSTTIQ   HRVGAGGIL
Subjt:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAMS-AQPS
        GIVFGITFAVFLAMGVYYVLRTRQANANRAMS AQPS
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAMS-AQPS

A0A5A7SXJ1 Uncharacterized protein

1.1e-61

91.24

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Query:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL
        MT+MLTFLFCLSSFTFLS+A+A+GRAPHGLVYESPVAFSPMAYDFFHPSTQ PN KDPCG SKCSPLPLAAQVQSTPA+ESKYSTTIQ   HRVGAGGIL
Subjt:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAMS-AQPS
        GIVFGITFAVFLAMGVYYVLRTRQANANRAMS AQPS
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAMS-AQPS

A0A6J1DWP3 uncharacterized protein LOC111025099

4.3e-58

85.93

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Query:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL
        MTQMLTFLFCLSS TFLS+A+AEGRAPHGLVYESP+AFSPMAYDFFHPS Q  NAKDPC ASKCSPLPLAAQVQSTPA++SKYST +QKG H +GAGG+L
Subjt:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAMSAQP
        GIV GI FAVFLAMGVYYVLRTRQANANRAMS QP
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAMSAQP

A0A6J1GD80 uncharacterized protein LOC111452884

3.2e-53

82.96

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Query:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL
        M Q LTFLF LSSF+FLSI +AEGRAPHGLVYE+PVAFSPMAYDFFHP T++PNA+DPCGASKCSPLPLAAQ+QS PA+ESKYSTT QKG    G GGIL
Subjt:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAMSAQP
        GIVFGITFAVFLAMGVYYVLRTR AN NRAMSA+P
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAMSAQP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G28410.1 unknown protein

1.3e-19

45.22

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Query:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAK-DPCGASKCSPLPLAAQVQSTPAKESKYS-TTIQKGTHR-VGAG
        MT     +F  SS    + A A+ RAPHGL YE+PVAFSP A+DFFH   + P+   +PC  S CSPLP+AA+VQ   AK  +    +I  GT   +   
Subjt:  MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAK-DPCGASKCSPLPLAAQVQSTPAKESKYS-TTIQKGTHR-VGAG

Query:  GILGIVFGITFAVFL
        G++GI+FG+ FAV +
Subjt:  GILGIVFGITFAVFL

AT5G60650.1 unknown protein

2.2e-14

35.71

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Query:  MTQMLTFLF-CLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGAS----KCSPLPLAAQVQSTPAKESKYS----TTIQKGT
        +T  L F F CLS    +SIA +  R  HG  Y +P AFSP AYDFFHP +   +  +P  +S      SP P    +    ++ SK S    TT +   
Subjt:  MTQMLTFLF-CLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGAS----KCSPLPLAAQVQSTPAKESKYS----TTIQKGT

Query:  HRVGAGGILGIVFGITFAVFLAMGVYYVLRTRQANANRAM
           G G  +G+V G++F  FL++G+Y+V++ ++AN  R +
Subjt:  HRVGAGGILGIVFGITFAVFLAMGVYYVLRTRQANANRAM

Sequences

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CDS sequence

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ATGACTCAAATGCTTACTTTCCTGTTCTGTCTCTCTTCCTTCACATTTCTTTCCATCGCCCAAGCCGAAGGCAGAGCCCCGCACGGCTTGGTATACGAGAGCCCGGTTGC
CTTCTCCCCAATGGCATATGATTTCTTCCATCCAAGCACCCAGACTCCCAATGCCAAAGATCCATGTGGTGCATCCAAATGCTCCCCACTGCCCCTTGCAGCTCAAGTGC
AATCTACTCCTGCAAAAGAAAGCAAATACTCCACAACAATCCAGAAAGGCACGCACCGTGTCGGGGCTGGGGGGATTCTGGGAATTGTGTTTGGCATCACATTTGCAGTG
TTTTTGGCAATGGGAGTATACTATGTACTACGTACTCGCCAAGCCAACGCAAACCGAGCTATGTCAGCACAACCTAGTGTTTGA

mRNA sequence

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Protein sequence

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MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGILGIVFGITFAV
FLAMGVYYVLRTRQANANRAMSAQPSV

Carg21028 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome