; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg21035 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21035
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTHO complex subunit 4A-like
Genome locationCarg_Chr13:1140984..1144434
RNA-Seq ExpressionCarg21035
SyntenyCarg21035
Gene Ontology termsGO:0006406 - mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR025715 - Chromatin target of PRMT1 protein, C-terminal
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583468.1 THO complex subunit 4A, partial [Cucurbita argyrosperma subsp. sororia]7.1e-12799.17Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN
        MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN

Query:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR
        EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPA+PASANGNFGNPNGFRRGGHVLGRNRGGGR
Subjt:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR

Query:  GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAMKIN
        GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAM+IN
Subjt:  GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAMKIN

KAG7019223.1 THO complex subunit 4A [Cucurbita argyrosperma subsp. argyrosperma]1.9e-127100Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN
        MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN

Query:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR
        EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR
Subjt:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR

Query:  GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAMKIN
        GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAMKIN
Subjt:  GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAMKIN

XP_022964653.1 THO complex subunit 4B-like [Cucurbita moschata]1.2e-12699.17Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN
        MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHG+AYPSQPARASAIETGTKLYVSNLDYGVSN
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN

Query:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR
        EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR
Subjt:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR

Query:  GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAMKIN
        GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAM+IN
Subjt:  GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAMKIN

XP_022970368.1 THO complex subunit 4A-like [Cucurbita maxima]3.9e-12598.76Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN
        MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN

Query:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR
        EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGK MKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR
Subjt:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR

Query:  GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAMKIN
        GRGPGRGGRG GSSSRGRGEKLSAEDLDADLEKYHEEAM+IN
Subjt:  GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAMKIN

XP_023520096.1 THO complex subunit 4A-like [Cucurbita pepo subsp. pepo]8.7e-12598.76Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN
        MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN

Query:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR
        EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNI+TPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR
Subjt:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR

Query:  GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAMKIN
        GRGPGRGGRGRG SSRGRGEKLSAEDLDADLEKYHEEAM+IN
Subjt:  GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAMKIN

TrEMBL top hitse value%identityAlignment
A0A0A0LUQ3 RRM domain-containing protein3.7e-11388.8Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN
        MAEPLDMSLDDIIKNNKKSGSSNFR RGGASSGPGPSRRFRNRGLNRA PYST++APETAWSHDMFVDHGAAYPS P RASAIETGTKLYVSNLDYGVSN
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN

Query:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR
        EDIKELFSEVGD+KRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGK MKLEIVGTNIVTPAVPA +N +FGNPNGF RGG  +GRNRGGGR
Subjt:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR

Query:  GRGPGRG-GRGRGS-------SSRGRGEKLSAEDLDADLEKYHEEAMKIN
        GRGPGRG GRGRGS       S RG GEKLSAEDLDADL+KYHEEAM+IN
Subjt:  GRGPGRG-GRGRGS-------SSRGRGEKLSAEDLDADLEKYHEEAMKIN

A0A1S3C5R6 THO complex subunit 4A7.4e-11490.2Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN
        MAEPLDMSLDDIIKNNKKSGSSNFR RGGASSGPGPSRRFRNRGLNRA PYST++APETAWSHDMFVDHGAAYPS P RASAIETGTKLYVSNLDYGVSN
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN

Query:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR
        EDIKELFSEVGDLKRYSINYDKSGRSKGTAEI+FSR ADALAAIKRYNNVQLDGK MKLEIVGTNIVTPAVPA +N +FGN NGF RGG  +GRNRGGGR
Subjt:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR

Query:  GRGPGRGGRGRGS---SSRGRGEKLSAEDLDADLEKYHEEAMKIN
        GRGPGRGGRGRGS   S RGRGEKLSAEDLDADL+KYHEEAM+IN
Subjt:  GRGPGRGGRGRGS---SSRGRGEKLSAEDLDADLEKYHEEAMKIN

A0A6J1G9Y5 THO complex subunit 4A-like isoform X21.5e-10988.02Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN
        M +PLD SLDDIIKNNKKSGSSNFRGRGGASSGP PSRRF NRGLNRAAPYS A+APET WSHD+FVDHG AYPS PARAS IETGTKLYVSNLDYGVSN
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN

Query:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR
        EDIKELFSEVGDLKRYSINYDKSGRSKGTAE+VFSRQADALAAIKRYNNVQLDGK MKLEIVG NIVTP +PAS+N NFGN +GF RGG  LGRNRGGGR
Subjt:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR

Query:  GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAMKIN
        GRGPGRGGRGRG + RG GEKLSAEDLDADLEKYHEEAM+IN
Subjt:  GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAMKIN

A0A6J1HLI4 THO complex subunit 4B-like5.9e-12799.17Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN
        MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHG+AYPSQPARASAIETGTKLYVSNLDYGVSN
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN

Query:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR
        EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR
Subjt:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR

Query:  GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAMKIN
        GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAM+IN
Subjt:  GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAMKIN

A0A6J1I3N4 THO complex subunit 4A-like1.9e-12598.76Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN
        MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSN

Query:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR
        EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGK MKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR
Subjt:  EDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGR

Query:  GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAMKIN
        GRGPGRGGRG GSSSRGRGEKLSAEDLDADLEKYHEEAM+IN
Subjt:  GRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYHEEAMKIN

SwissProt top hitse value%identityAlignment
B5FXN8 THO complex subunit 43.8e-3844.4Show/hide
Query:  MAEPLDMSLDDIIKNNKKS-----GSSNFRGRGGASSGPGPSR-----------RFRNR-------GLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQP
        MA+ +DMSLDDIIK N+       G    RGRGG + G GP R             RNR       G NR APYS  +     W HD+F D G       
Subjt:  MAEPLDMSLDDIIKNNKKS-----GSSNFRGRGGASSGPGPSR-----------RFRNR-------GLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQP

Query:  ARASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANG
           + +ETG KL VSNLD+GVS+ DI+ELF+E G LK+ +++YD+SGRS GTA++ F R+ADAL A+K+YN V LDG+ M +++V + I T   PA +  
Subjt:  ARASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANG

Query:  NFGNPNGFRRGGHVLGRNRGGGRGRGPGRGGRGRG-SSSRGRGEKLSAEDLDADLEKYH
           N  G  R   VLG   GGG  RG   G RGRG  + R   ++LSAE+LDA L+ Y+
Subjt:  NFGNPNGFRRGGHVLGRNRGGGRGRGPGRGGRGRG-SSSRGRGEKLSAEDLDADLEKYH

Q3T0I4 THO complex subunit 49.3e-3741.91Show/hide
Query:  MAEPLDMSLDDIIKNNKKS----GSSNFRGRGGASSGPGPSRR-----------FRNR-----------GLNRAAPYSTAQAPETAWSHDMFVDHGAAYP
        MA+ +DMSLDDIIK N+      G    RGR G+  G G   +            RNR           G NR APYS  +     W HD+F D G    
Subjt:  MAEPLDMSLDDIIKNNKKS----GSSNFRGRGGASSGPGPSRR-----------FRNR-----------GLNRAAPYSTAQAPETAWSHDMFVDHGAAYP

Query:  SQPARASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPAS
              + +ETG KL VSNLD+GVS+ DI+ELF+E G LK+ +++YD+SGRS GTA++ F R+ADAL A+K+YN V LDG+ M +++V + I T   PA 
Subjt:  SQPARASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPAS

Query:  A-----------NGNFGNPNGFRRGGHVLGRNRGGGRGRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYH
        +           +G FG   G RRG       RGG RGR     GRG G SS+   ++LSAE+LDA L+ Y+
Subjt:  A-----------NGNFGNPNGFRRGGHVLGRNRGGGRGRGPGRGGRGRGSSSRGRGEKLSAEDLDADLEKYH

Q6NQ72 THO complex subunit 4D9.3e-3741.58Show/hide
Query:  MAEPLDMSLDDIIKNNK--KSGSSNF-----RGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAP-----ETAWSHDMFVDHGAAYPSQPARASAIETGTK
        M+  L+M+LD+I+K  K  +SG         RGRGG   G GP+RR     +N      T   P        W   +F D   A     A AS +E GT+
Subjt:  MAEPLDMSLDDIIKNNK--KSGSSNF-----RGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAP-----ETAWSHDMFVDHGAAYPSQPARASAIETGTK

Query:  LYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPA-VPASANGNFGNPNG---
        L+V+NLD GV+NEDI+ELFSE+G+++RY+I+YDK+GR  GTAE+V+ R++DA  A+K+YNNV LDG+ M+LEI+G N  + A +    N N    NG   
Subjt:  LYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPA-VPASANGNFGNPNG---

Query:  ----FRRGGHVLGRNRGGGRGRGP--------------------GRGG---RGRGSSSRGRG---------EKLSAEDLDADLEKYHEEAM
             ++GG   GR RGG  GRGP                    GRGG   RGRG+  RGRG          + SA DLD DLE YH +AM
Subjt:  ----FRRGGHVLGRNRGGGRGRGP--------------------GRGG---RGRGSSSRGRG---------EKLSAEDLDADLEKYHEEAM

Q8L719 THO complex subunit 4B1.4e-6455.86Show/hide
Query:  MAEPLDMSLDDIIKNNKK----------SGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYS----TAQAPETAWSHDMFVD-------HGAAYPSQPAR
        M+  LDMSLDDIIK+N+K           G +N  GRGG+ S  GPSRRF NR   R APYS      QA +  W +D+F          G    +    
Subjt:  MAEPLDMSLDDIIKNNKK----------SGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYS----TAQAPETAWSHDMFVD-------HGAAYPSQPAR

Query:  ASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASA----
         S+IETGTKLY+SNLDYGVSNEDIKELFSEVGDLKRY I+YD+SGRSKGTAE+VFSR+ DALAA+KRYNNVQLDGK MK+EIVGTN+  PA+P  A    
Subjt:  ASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASA----

Query:  ---------------NGNF-GNPNGFRRG---GHVLGRNRGGGRGRGPGRGGR------GRGSSSRGRGEKLSAEDLDADLEKYHEEAMK
                       NGNF GN NG  RG   G  +GR RGGG G G  RGGR      GRGS  RGR E +SAEDLDA+L+KYH+EAM+
Subjt:  ---------------NGNF-GNPNGFRRG---GHVLGRNRGGGRGRGPGRGGR------GRGSSSRGRGEKLSAEDLDADLEKYHEEAMK

Q8L773 THO complex subunit 4A1.2e-6360.08Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRGRG-GASSGPGPSRRFR-NRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASA-IETGTKLYVSNLDYG
        M+  LDMSLDD+I  N+KS       RG G+ SGPGP+RR   NR   R+APY +A+APE+ W HDMF D    + S   R+SA IETGTKLY+SNLDYG
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRGRG-GASSGPGPSRRFR-NRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASA-IETGTKLYVSNLDYG

Query:  VSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNG--FRRGGHVLGRN
        V NEDIKELF+EVG+LKRY++++D+SGRSKGTAE+V+SR+ DALAA+K+YN+VQLDGK MK+EIVGTN+ T A P+    N GN NG  +R G    G+ 
Subjt:  VSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNG--FRRGGHVLGRN

Query:  RGGGRGRGPGRGGRGRG-SSSRGRGEKLSAEDLDADLEKYHEEAMKIN
        RGGGRG G GRGG GRG    +G  EK+SAEDLDADL+KYH   M+ N
Subjt:  RGGGRGRGPGRGGRGRG-SSSRGRGEKLSAEDLDADLEKYHEEAMKIN

Arabidopsis top hitse value%identityAlignment
AT5G02530.1 RNA-binding (RRM/RBD/RNP motifs) family protein9.7e-6655.86Show/hide
Query:  MAEPLDMSLDDIIKNNKK----------SGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYS----TAQAPETAWSHDMFVD-------HGAAYPSQPAR
        M+  LDMSLDDIIK+N+K           G +N  GRGG+ S  GPSRRF NR   R APYS      QA +  W +D+F          G    +    
Subjt:  MAEPLDMSLDDIIKNNKK----------SGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYS----TAQAPETAWSHDMFVD-------HGAAYPSQPAR

Query:  ASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASA----
         S+IETGTKLY+SNLDYGVSNEDIKELFSEVGDLKRY I+YD+SGRSKGTAE+VFSR+ DALAA+KRYNNVQLDGK MK+EIVGTN+  PA+P  A    
Subjt:  ASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASA----

Query:  ---------------NGNF-GNPNGFRRG---GHVLGRNRGGGRGRGPGRGGR------GRGSSSRGRGEKLSAEDLDADLEKYHEEAMK
                       NGNF GN NG  RG   G  +GR RGGG G G  RGGR      GRGS  RGR E +SAEDLDA+L+KYH+EAM+
Subjt:  ---------------NGNF-GNPNGFRRG---GHVLGRNRGGGRGRGPGRGGR------GRGSSSRGRGEKLSAEDLDADLEKYHEEAMK

AT5G02530.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.3e-6656.25Show/hide
Query:  MAEPLDMSLDDIIKNNKK----------SGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYS----TAQAPETAWSHDMFVD-------HGAAYPSQPAR
        M+  LDMSLDDIIK+N+K           G +N  GRGG+ S  GPSRRF NR   R APYS      QA +  W +D+F          G    +    
Subjt:  MAEPLDMSLDDIIKNNKK----------SGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYS----TAQAPETAWSHDMFVD-------HGAAYPSQPAR

Query:  ASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASA----
         S+IETGTKLY+SNLDYGVSNEDIKELFSEVGDLKRY I+YD+SGRSKGTAE+VFSR+ DALAA+KRYNNVQLDGK MK+EIVGTN+  PA+P  A    
Subjt:  ASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASA----

Query:  ---------------NGNF-GNPNG-FRRGGHVLGRNRGGGRGRGPGRGGR------GRGSSSRGRGEKLSAEDLDADLEKYHEEAMK
                       NGNF GN NG FR  G  +GR RGGG G G  RGGR      GRGS  RGR E +SAEDLDA+L+KYH+EAM+
Subjt:  ---------------NGNF-GNPNG-FRRGGHVLGRNRGGGRGRGPGRGGR------GRGSSSRGRGEKLSAEDLDADLEKYHEEAMK

AT5G59950.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.3e-6560.08Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRGRG-GASSGPGPSRRFR-NRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASA-IETGTKLYVSNLDYG
        M+  LDMSLDD+I  N+KS       RG G+ SGPGP+RR   NR   R+APY +A+APE+ W HDMF D    + S   R+SA IETGTKLY+SNLDYG
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRGRG-GASSGPGPSRRFR-NRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASA-IETGTKLYVSNLDYG

Query:  VSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNG--FRRGGHVLGRN
        V NEDIKELF+EVG+LKRY++++D+SGRSKGTAE+V+SR+ DALAA+K+YN+VQLDGK MK+EIVGTN+ T A P+    N GN NG  +R G    G+ 
Subjt:  VSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNG--FRRGGHVLGRN

Query:  RGGGRGRGPGRGGRGRG-SSSRGRGEKLSAEDLDADLEKYHEEAMKIN
        RGGGRG G GRGG GRG    +G  EK+SAEDLDADL+KYH   M+ N
Subjt:  RGGGRGRGPGRGGRGRG-SSSRGRGEKLSAEDLDADLEKYHEEAMKIN

AT5G59950.3 RNA-binding (RRM/RBD/RNP motifs) family protein1.0e-6259.68Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRGRG-GASSGPGPSRRFR-NRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASA-IETGTKLYVSNLDYG
        M+  LDMSLDD+I  N+KS       RG G+ SGPGP+RR   NR   R+APY +  APE+ W HDMF D    + S   R+SA IETGTKLY+SNLDYG
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRGRG-GASSGPGPSRRFR-NRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASA-IETGTKLYVSNLDYG

Query:  VSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNG--FRRGGHVLGRN
        V NEDIKELF+EVG+LKRY++++D+SGRSKGTAE+V+SR+ DALAA+K+YN+VQLDGK MK+EIVGTN+ T A P+    N GN NG  +R G    G+ 
Subjt:  VSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNG--FRRGGHVLGRN

Query:  RGGGRGRGPGRGGRGRG-SSSRGRGEKLSAEDLDADLEKYHEEAMKIN
        RGGGRG G GRGG GRG    +G  EK+SAEDLDADL+KYH   M+ N
Subjt:  RGGGRGRGPGRGGRGRG-SSSRGRGEKLSAEDLDADLEKYHEEAMKIN

AT5G59950.5 RNA-binding (RRM/RBD/RNP motifs) family protein6.3e-6560.24Show/hide
Query:  MAEPLDMSLDDIIKNNKKSGSSNFRGRG-GASSGPGPSRRFR-NRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASA-IETGTKLYVSNLDYG
        M+  LDMSLDD+I  N+KS       RG G+ SGPGP+RR   NR   R+APY +A+APE+ W HDMF D    + S   R+SA IETGTKLY+SNLDYG
Subjt:  MAEPLDMSLDDIIKNNKKSGSSNFRGRG-GASSGPGPSRRFR-NRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASA-IETGTKLYVSNLDYG

Query:  VSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNG--FRRGGHVL-GR
        V NEDIKELF+EVG+LKRY++++D+SGRSKGTAE+V+SR+ DALAA+K+YN+VQLDGK MK+EIVGTN+ T A P+    N GN NG  + RGG    G+
Subjt:  VSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNG--FRRGGHVL-GR

Query:  NRGGGRGRGPGRGGRGRG-SSSRGRGEKLSAEDLDADLEKYHEEAMKIN
         RGGGRG G GRGG GRG    +G  EK+SAEDLDADL+KYH   M+ N
Subjt:  NRGGGRGRGPGRGGRGRG-SSSRGRGEKLSAEDLDADLEKYHEEAMKIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGCCTCTCGATATGAGCTTGGATGATATCATCAAGAACAACAAGAAATCTGGATCCTCGAACTTCAGGGGTCGTGGCGGAGCTTCTTCTGGACCAGGTCCCTC
TCGCCGCTTTCGCAATCGCGGTCTTAATAGAGCAGCGCCCTATTCTACTGCCCAGGCGCCGGAGACGGCTTGGTCACACGACATGTTTGTAGATCATGGTGCGGCATATC
CTTCACAGCCTGCACGGGCCTCTGCTATCGAAACCGGCACCAAGCTTTATGTTTCTAATTTGGATTATGGTGTTTCCAACGAGGATATCAAGGAACTGTTTTCAGAAGTT
GGTGATCTCAAACGATATTCTATCAATTATGATAAAAGTGGGAGGTCAAAGGGAACAGCAGAAATTGTTTTTTCACGACAAGCAGATGCGCTTGCTGCTATAAAGAGGTA
CAACAATGTTCAGCTAGATGGGAAGCACATGAAGTTGGAGATTGTAGGAACTAACATCGTGACACCTGCTGTTCCTGCTTCTGCAAATGGCAATTTTGGGAATCCAAATG
GATTTCGAAGAGGTGGACATGTACTGGGCCGAAATCGGGGTGGTGGACGAGGACGTGGTCCTGGAAGAGGAGGACGTGGACGTGGGAGTAGCAGCAGAGGTCGTGGGGAG
AAATTATCTGCCGAAGATCTAGATGCTGATTTGGAGAAGTATCATGAAGAAGCCATGAAGATCAATTAA
mRNA sequenceShow/hide mRNA sequence
TTTTGAATATTCAAACCGATCTAACAAAGAAGTAATTTTAATGGGGTTTGATTTAGCATATTGCGCTGGATCTTCCTCTACCTTTGTCCATTGTTGAAACCCTAGGAATT
CTCTCTCCGATCCACGACCACCACTCCTCCGCTCATCAATGGCAGAGCCTCTCGATATGAGCTTGGATGATATCATCAAGAACAACAAGAAATCTGGATCCTCGAACTTC
AGGGGTCGTGGCGGAGCTTCTTCTGGACCAGGTCCCTCTCGCCGCTTTCGCAATCGCGGTCTTAATAGAGCAGCGCCCTATTCTACTGCCCAGGCGCCGGAGACGGCTTG
GTCACACGACATGTTTGTAGATCATGGTGCGGCATATCCTTCACAGCCTGCACGGGCCTCTGCTATCGAAACCGGCACCAAGCTTTATGTTTCTAATTTGGATTATGGTG
TTTCCAACGAGGATATCAAGGAACTGTTTTCAGAAGTTGGTGATCTCAAACGATATTCTATCAATTATGATAAAAGTGGGAGGTCAAAGGGAACAGCAGAAATTGTTTTT
TCACGACAAGCAGATGCGCTTGCTGCTATAAAGAGGTACAACAATGTTCAGCTAGATGGGAAGCACATGAAGTTGGAGATTGTAGGAACTAACATCGTGACACCTGCTGT
TCCTGCTTCTGCAAATGGCAATTTTGGGAATCCAAATGGATTTCGAAGAGGTGGACATGTACTGGGCCGAAATCGGGGTGGTGGACGAGGACGTGGTCCTGGAAGAGGAG
GACGTGGACGTGGGAGTAGCAGCAGAGGTCGTGGGGAGAAATTATCTGCCGAAGATCTAGATGCTGATTTGGAGAAGTATCATGAAGAAGCCATGAAGATCAATTAAATC
ATTTGGTGTGATTTCCTGGTGCTTGATATTCCCAACTTCGTTAGGTGCTTGATGATAAATGTGATAAGGATACCATTTTCTATTTTGCGAGTCATATCATGAAGCCCTGA
CCTTGAGAGAACCACTAGACCTTGCTAGGATGTGGAGTTTGGGCTTCAATTGTTATTTGTTGCAGTAAACTACAATGAGGTGTTATATATGCTTGAATCTGTAATCTCCC
GTTACTTATCTGTTTCTTAATCTTCTCCAATCCTATTTATTTTCCATGAAAGTTGCACTGGAACTGGGAAAGTCGCTCACACTCCTTGTCGACACGGAAGGATTTGGGCG
CTTGACATGGGAAGTATTGGTTATAACATAATCAACCACATCTTCTGGTGTTGAGGCCAAAGTTCTGCGTTTGGTTTTATGAAATAAAAGTAATGTGTTAAGATCTTCTA
CTTGTTGGCATGGAGAGGAAGGAAGGGG
Protein sequenceShow/hide protein sequence
MAEPLDMSLDDIIKNNKKSGSSNFRGRGGASSGPGPSRRFRNRGLNRAAPYSTAQAPETAWSHDMFVDHGAAYPSQPARASAIETGTKLYVSNLDYGVSNEDIKELFSEV
GDLKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKHMKLEIVGTNIVTPAVPASANGNFGNPNGFRRGGHVLGRNRGGGRGRGPGRGGRGRGSSSRGRGE
KLSAEDLDADLEKYHEEAMKIN