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Carg21038 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21038
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein NRT1/ PTR FAMILY 2.7-like
Genome locationCarg_Chr13:1156990..1158850
RNA-Seq ExpressionCarg21038
SyntenyCarg21038
Gene Ontology termsGO:0006857 - oligopeptide transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsIPR000109 - Proton-dependent oligopeptide transporter family
IPR036259 - MFS transporter superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583470.1 Protein NRT1/ PTR FAMILY 2.7, partial [Cucurbita argyrosperma subsp. sororia]2.8e-3486.14Show/hide
Query:  MEGGGGGDREGAQSPDE--------IRARSFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISL
        MEGGGGGDREGAQSP +            SFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISL
Subjt:  MEGGGGGDREGAQSPDE--------IRARSFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISL

Query:  L
        L
Subjt:  L

KAG7019226.1 putative protein NRT1/ PTR FAMILY 2.2, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-59100Show/hide
Query:  MEGGGGGDREGAQSPDEIRARSFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIVQR
        MEGGGGGDREGAQSPDEIRARSFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIVQR
Subjt:  MEGGGGGDREGAQSPDEIRARSFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIVQR

Query:  KVYRLKRGKASKNPSQEIPQFAPSR
        KVYRLKRGKASKNPSQEIPQFAPSR
Subjt:  KVYRLKRGKASKNPSQEIPQFAPSR

XP_022964645.1 protein NRT1/ PTR FAMILY 2.7-like [Cucurbita moschata]2.8e-3486.14Show/hide
Query:  MEGGGGGDREGAQSPDE--------IRARSFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISL
        MEGGGGGDREGAQSP +            SFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISL
Subjt:  MEGGGGGDREGAQSPDE--------IRARSFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISL

Query:  L
        L
Subjt:  L

XP_022970367.1 protein NRT1/ PTR FAMILY 2.7-like [Cucurbita maxima]3.2e-3083.51Show/hide
Query:  GGGDREGAQSPDE--------IRARSFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLL
        G GDRE AQSP +            SFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLL
Subjt:  GGGDREGAQSPDE--------IRARSFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLL

XP_023519422.1 protein NRT1/ PTR FAMILY 2.7-like [Cucurbita pepo subsp. pepo]5.3e-3385.86Show/hide
Query:  GGGGGDREGAQSPDE--------IRARSFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLL
        GGGGGDREGAQSP +            SFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLL
Subjt:  GGGGGDREGAQSPDE--------IRARSFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLL

TrEMBL top hitse value%identityAlignment
A0A1S3C5D4 protein NRT1/ PTR FAMILY 2.7-like3.8e-2176.39Show/hide
Query:  SFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLL
        SF C +LA+GGWL+NL+VYLI+EYN+ +IDATLI N+VSGC  VFPVVGAV+ADSF GSF VVAISTSISLL
Subjt:  SFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLL

A0A5A7SWV6 Protein NRT1/ PTR FAMILY 2.7-like3.8e-2176.39Show/hide
Query:  SFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLL
        SF C +LA+GGWL+NL+VYLI+EYN+ +IDATLI N+VSGC  VFPVVGAV+ADSF GSF VVAISTSISLL
Subjt:  SFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLL

A0A5D3BUX2 Protein NRT1/ PTR FAMILY 2.7-like6.5e-2171.62Show/hide
Query:  SFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPV
        SF C +LA+GGWL NL+VYLI+EYN+ +IDATLI N+V+GC SVFPVVGAV+ADSF GSF V+ ISTSISLL +
Subjt:  SFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPV

A0A6J1HLE4 protein NRT1/ PTR FAMILY 2.7-like1.4e-3486.14Show/hide
Query:  MEGGGGGDREGAQSPDE--------IRARSFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISL
        MEGGGGGDREGAQSP +            SFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISL
Subjt:  MEGGGGGDREGAQSPDE--------IRARSFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISL

Query:  L
        L
Subjt:  L

A0A6J1HYW4 protein NRT1/ PTR FAMILY 2.7-like1.5e-3083.51Show/hide
Query:  GGGDREGAQSPDE--------IRARSFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLL
        G GDRE AQSP +            SFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLL
Subjt:  GGGDREGAQSPDE--------IRARSFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLL

SwissProt top hitse value%identityAlignment
Q9M171 Protein NRT1/ PTR FAMILY 2.11.3e-1351.39Show/hide
Query:  SLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIV
        S+ S GW+ NL+V+LI+EYN+K+I A  ISN+V+GC S+ PVV A++ADSF G+  V++ S  ISLL + ++
Subjt:  SLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIV

Q9M174 Putative protein NRT1/ PTR FAMILY 2.24.4e-1452.78Show/hide
Query:  SLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIV
        S+AS GW+ NLVV+LI+E+N+K+I AT  SN+V+GC S+ PVV A++ADSF G+  V+++S  ISLL + ++
Subjt:  SLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIV

Q9M175 Protein NRT1/ PTR FAMILY 2.31.7e-1351.39Show/hide
Query:  SLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIV
        S+ S GW+ NL+V+LI+E+N+K+I A  ISNV +GC S+ PVV A++ADSF G+  V+A S+ ISLL + ++
Subjt:  SLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIV

Q9M1E1 Protein NRT1/ PTR FAMILY 2.65.3e-1242.34Show/hide
Query:  MEGGGGGDREGAQSPDEIRARS-------------FGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAIS
        M G    D E  +S D    RS             FG T LA+ GWL NL+VYLI+EYN+K+I A  I N+ SG   +FP +GA+ ADSF G+  V+ +S
Subjt:  MEGGGGGDREGAQSPDEIRARS-------------FGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAIS

Query:  TSISLLPVSIV
        + ISL+ V ++
Subjt:  TSISLLPVSIV

Q9M1E2 Protein NRT1/ PTR FAMILY 2.73.7e-1348.61Show/hide
Query:  SLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIV
        ++A+ GWL NL+VYLI+E+NVK+I A  I+N+VSGC  + P V A+ +DSF G+  V+++S  ISL+ V+++
Subjt:  SLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIV

Arabidopsis top hitse value%identityAlignment
AT3G45650.1 nitrate excretion transporter12.6e-1448.61Show/hide
Query:  SLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIV
        ++A+ GWL NL+VYLI+E+NVK+I A  I+N+VSGC  + P V A+ +DSF G+  V+++S  ISL+ V+++
Subjt:  SLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIV

AT3G45660.1 Major facilitator superfamily protein3.8e-1342.34Show/hide
Query:  MEGGGGGDREGAQSPDEIRARS-------------FGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAIS
        M G    D E  +S D    RS             FG T LA+ GWL NL+VYLI+EYN+K+I A  I N+ SG   +FP +GA+ ADSF G+  V+ +S
Subjt:  MEGGGGGDREGAQSPDEIRARS-------------FGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAIS

Query:  TSISLLPVSIV
        + ISL+ V ++
Subjt:  TSISLLPVSIV

AT3G45680.1 Major facilitator superfamily protein1.2e-1451.39Show/hide
Query:  SLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIV
        S+ S GW+ NL+V+LI+E+N+K+I A  ISNV +GC S+ PVV A++ADSF G+  V+A S+ ISLL + ++
Subjt:  SLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIV

AT3G45690.1 Major facilitator superfamily protein3.1e-1552.78Show/hide
Query:  SLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIV
        S+AS GW+ NLVV+LI+E+N+K+I AT  SN+V+GC S+ PVV A++ADSF G+  V+++S  ISLL + ++
Subjt:  SLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIV

AT3G45720.1 Major facilitator superfamily protein9.0e-1551.39Show/hide
Query:  SLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIV
        S+ S GW+ NL+V+LI+EYN+K+I A  ISN+V+GC S+ PVV A++ADSF G+  V++ S  ISLL + ++
Subjt:  SLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAGGAGGAGGAGGAGACAGAGAAGGAGCTCAAAGTCCGGATGAGATAAGAGCAAGATCTTTTGGTTGCACGTCGCTGGCCAGTGGGGGATGGCTTACAAACTT
GGTGGTGTATTTGATTCAAGAGTACAACGTTAAGAACATCGATGCCACTTTGATTTCCAACGTTGTTAGTGGCTGTTTCAGTGTGTTTCCTGTCGTGGGAGCTGTTATTG
CTGACTCTTTCTTGGGATCTTTCTCTGTCGTAGCTATTTCCACTTCTATTTCTCTCTTGCCAGTTTCAATCGTGCAACGGAAAGTCTATAGGCTGAAGCGAGGCAAAGCT
TCAAAGAACCCATCTCAAGAGATACCGCAGTTTGCACCATCTCGT
mRNA sequenceShow/hide mRNA sequence
GAACATGGAAGGAGGAGGAGGAGGAGACAGAGAAGGAGCTCAAAGTCCGGATGAGATAAGAGCAAGATCTTTTGGTTGCACGTCGCTGGCCAGTGGGGGATGGCTTACAA
ACTTGGTGGTGTATTTGATTCAAGAGTACAACGTTAAGAACATCGATGCCACTTTGATTTCCAACGTTGTTAGTGGCTGTTTCAGTGTGTTTCCTGTCGTGGGAGCTGTT
ATTGCTGACTCTTTCTTGGGATCTTTCTCTGTCGTAGCTATTTCCACTTCTATTTCTCTCTTGCCAGTTTCAATCGTGCAACGGAAAGTCTATAGGCTGAAGCGAGGCAA
AGCTTCAAAGAACCCATCTCAAGAGATACCGCAGTTTGCACCATCTCGT
Protein sequenceShow/hide protein sequence
MEGGGGGDREGAQSPDEIRARSFGCTSLASGGWLTNLVVYLIQEYNVKNIDATLISNVVSGCFSVFPVVGAVIADSFLGSFSVVAISTSISLLPVSIVQRKVYRLKRGKA
SKNPSQEIPQFAPSR