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Carg21050 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21050
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr13:1284779..1286870
RNA-Seq ExpressionCarg21050
SyntenyCarg21050
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583483.1 Leucine--tRNA ligase, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia]9.7e-2188.33Show/hide
Query:  DLNGVDSSLPPHPLQACKTSNRQPPPSGVSDGGLLSLSIKPSGIAACRLKSQPFPFSFFL
        +L    +SLPPHPLQACKTSNRQPPPSGVSDGGLLS SIKPSGIAACRLKSQPFPFSFFL
Subjt:  DLNGVDSSLPPHPLQACKTSNRQPPPSGVSDGGLLSLSIKPSGIAACRLKSQPFPFSFFL
KAG7019238.1 hypothetical protein SDJN02_18197, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-82100Show/hide
Query:  MLSPKGGEFEGGPISIGERNECQRGRWDLNGVDSSLPPHPLQACKTSNRQPPPSGVSDGGLLSLSIKPSGIAACRLKSQPFPFSFFLIMQVLGLYFSMCI
        MLSPKGGEFEGGPISIGERNECQRGRWDLNGVDSSLPPHPLQACKTSNRQPPPSGVSDGGLLSLSIKPSGIAACRLKSQPFPFSFFLIMQVLGLYFSMCI
Subjt:  MLSPKGGEFEGGPISIGERNECQRGRWDLNGVDSSLPPHPLQACKTSNRQPPPSGVSDGGLLSLSIKPSGIAACRLKSQPFPFSFFLIMQVLGLYFSMCI

Query:  CDISLAALILFSTPSPPQSHPLASIFLYSLSIFLSAELRWHTFPTDSDFLETN
        CDISLAALILFSTPSPPQSHPLASIFLYSLSIFLSAELRWHTFPTDSDFLETN
Subjt:  CDISLAALILFSTPSPPQSHPLASIFLYSLSIFLSAELRWHTFPTDSDFLETN
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAGCCCCAAAGGGGGTGAATTTGAAGGAGGTCCCATATCGATTGGAGAAAGGAACGAGTGCCAGCGAGGACGCTGGGATCTAAATGGAGTGGATTCCTCTCTCCC
TCCACATCCATTGCAAGCTTGTAAAACCTCCAACCGGCAACCACCGCCTTCCGGCGTATCGGACGGCGGCCTACTGTCACTCTCTATCAAGCCGTCTGGTATTGCAGCTT
GTAGGCTCAAATCTCAACCATTTCCTTTCTCCTTCTTCTTGATTATGCAAGTACTGGGACTTTATTTCAGCATGTGTATTTGTGATATTTCATTGGCGGCACTGATTCTT
TTTAGTACGCCCTCTCCGCCGCAGTCTCATCCATTGGCATCGATTTTTCTTTATTCTCTTTCAATCTTCCTGTCTGCTGAACTGCGCTGGCACACCTTTCCGACAGATTC
GGATTTTCTAGAAACTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGAGCCCCAAAGGGGGTGAATTTGAAGGAGGTCCCATATCGATTGGAGAAAGGAACGAGTGCCAGCGAGGACGCTGGGATCTAAATGGAGTGGATTCCTCTCTCCC
TCCACATCCATTGCAAGCTTGTAAAACCTCCAACCGGCAACCACCGCCTTCCGGCGTATCGGACGGCGGCCTACTGTCACTCTCTATCAAGCCGTCTGGTATTGCAGCTT
GTAGGCTCAAATCTCAACCATTTCCTTTCTCCTTCTTCTTGATTATGCAAGTACTGGGACTTTATTTCAGCATGTGTATTTGTGATATTTCATTGGCGGCACTGATTCTT
TTTAGTACGCCCTCTCCGCCGCAGTCTCATCCATTGGCATCGATTTTTCTTTATTCTCTTTCAATCTTCCTGTCTGCTGAACTGCGCTGGCACACCTTTCCGACAGATTC
GGATTTTCTAGAAACTAATTGA
Protein sequenceShow/hide protein sequence
MLSPKGGEFEGGPISIGERNECQRGRWDLNGVDSSLPPHPLQACKTSNRQPPPSGVSDGGLLSLSIKPSGIAACRLKSQPFPFSFFLIMQVLGLYFSMCICDISLAALIL
FSTPSPPQSHPLASIFLYSLSIFLSAELRWHTFPTDSDFLETN