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Carg21081 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21081
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRNA-binding protein 25
Genome locationCarg_Chr07:8386073..8391602
RNA-Seq ExpressionCarg21081
SyntenyCarg21081
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027687.1 hypothetical protein SDJN02_11702, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-68100Show/hide
Query:  IETVSYLLREEVPITTRPAKEEEKKRTVLEEEEEKRRKEKKERGKKGAVTNSCGKYNIIKETDTWLQLPSSKDWTQILPCCSSHPTKIGPRYCLVTEECI
        IETVSYLLREEVPITTRPAKEEEKKRTVLEEEEEKRRKEKKERGKKGAVTNSCGKYNIIKETDTWLQLPSSKDWTQILPCCSSHPTKIGPRYCLVTEECI
Subjt:  IETVSYLLREEVPITTRPAKEEEKKRTVLEEEEEKRRKEKKERGKKGAVTNSCGKYNIIKETDTWLQLPSSKDWTQILPCCSSHPTKIGPRYCLVTEECI

Query:  LRFGLYMVAQERQLQNRARMLAESLKDVESGGSGENV
        LRFGLYMVAQERQLQNRARMLAESLKDVESGGSGENV
Subjt:  LRFGLYMVAQERQLQNRARMLAESLKDVESGGSGENV

XP_022929341.1 uncharacterized protein LOC111435944 [Cucurbita moschata]1.4e-07100Show/hide
Query:  GLYMVAQERQLQNRARMLAESLKDVESGGSGENV
        GLYMVAQERQLQNRARMLAESLKDVESGGSGENV
Subjt:  GLYMVAQERQLQNRARMLAESLKDVESGGSGENV

XP_022943075.1 stress response protein NST1 [Cucurbita moschata]4.2e-0765.08Show/hide
Query:  RPAKEEEKKRTVLEEEEEKRR-----KEKKERGKKGAVTNSCGKYNIIKETDTWLQLPSSKDW
        R  KE+EKKR   E+EEEKRR     KEKKERGKKGAVTNS GKY IIKETD W + P    W
Subjt:  RPAKEEEKKRTVLEEEEEKRR-----KEKKERGKKGAVTNSCGKYNIIKETDTWLQLPSSKDW

XP_023002503.1 troponin I [Cucurbita maxima]4.2e-0765.08Show/hide
Query:  RPAKEEEKKRTVLEEEEEKRR-----KEKKERGKKGAVTNSCGKYNIIKETDTWLQLPSSKDW
        R  KE+EKKR   E+EEEKRR     KEKKERGKKGAVTNS GKY IIKETD W + P    W
Subjt:  RPAKEEEKKRTVLEEEEEKRR-----KEKKERGKKGAVTNSCGKYNIIKETDTWLQLPSSKDW

XP_023515919.1 vicilin-like seed storage protein At2g18540 [Cucurbita pepo subsp. pepo]4.2e-0765.08Show/hide
Query:  RPAKEEEKKRTVLEEEEEKRR-----KEKKERGKKGAVTNSCGKYNIIKETDTWLQLPSSKDW
        R  KE+EKKR   E+EEEKRR     KEKKERGKKGAVTNS GKY IIKETD W + P    W
Subjt:  RPAKEEEKKRTVLEEEEEKRR-----KEKKERGKKGAVTNSCGKYNIIKETDTWLQLPSSKDW

TrEMBL top hitse value%identityAlignment
A0A6J1CMB2 troponin I3.4e-0764.52Show/hide
Query:  RPAKEEEKKRTVLEEEEEKRR----KEKKERGKKGAVTNSCGKYNIIKETDTWLQLPSSKDW
        R  KE+EKK+   E EEEKRR    KEKKERGKKGAVTNS GKY IIKETD W + P    W
Subjt:  RPAKEEEKKRTVLEEEEEKRR----KEKKERGKKGAVTNSCGKYNIIKETDTWLQLPSSKDW

A0A6J1EMV3 uncharacterized protein LOC1114359446.9e-08100Show/hide
Query:  GLYMVAQERQLQNRARMLAESLKDVESGGSGENV
        GLYMVAQERQLQNRARMLAESLKDVESGGSGENV
Subjt:  GLYMVAQERQLQNRARMLAESLKDVESGGSGENV

A0A6J1FXC4 stress response protein NST12.0e-0765.08Show/hide
Query:  RPAKEEEKKRTVLEEEEEKRR-----KEKKERGKKGAVTNSCGKYNIIKETDTWLQLPSSKDW
        R  KE+EKKR   E+EEEKRR     KEKKERGKKGAVTNS GKY IIKETD W + P    W
Subjt:  RPAKEEEKKRTVLEEEEEKRR-----KEKKERGKKGAVTNSCGKYNIIKETDTWLQLPSSKDW

A0A6J1J744 uncharacterized protein LOC1114831592.0e-0797.06Show/hide
Query:  GLYMVAQERQLQNRARMLAESLKDVESGGSGENV
        G YMVAQERQLQNRARMLAESLKDVESGGSGENV
Subjt:  GLYMVAQERQLQNRARMLAESLKDVESGGSGENV

A0A6J1KTR2 troponin I2.0e-0765.08Show/hide
Query:  RPAKEEEKKRTVLEEEEEKRR-----KEKKERGKKGAVTNSCGKYNIIKETDTWLQLPSSKDW
        R  KE+EKKR   E+EEEKRR     KEKKERGKKGAVTNS GKY IIKETD W + P    W
Subjt:  RPAKEEEKKRTVLEEEEEKRR-----KEKKERGKKGAVTNSCGKYNIIKETDTWLQLPSSKDW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15395.1 unknown protein8.4e-0670.59Show/hide
Query:  GLYMVAQERQLQNRARMLAESLKDVESGGSGENV
        GLYMVA ERQ QNRAR +AESL+  ES G G+NV
Subjt:  GLYMVAQERQLQNRARMLAESLKDVESGGSGENV

AT3G15395.2 unknown protein8.4e-0670.59Show/hide
Query:  GLYMVAQERQLQNRARMLAESLKDVESGGSGENV
        GLYMVA ERQ QNRAR +AESL+  ES G G+NV
Subjt:  GLYMVAQERQLQNRARMLAESLKDVESGGSGENV

AT3G15395.3 unknown protein8.4e-0670.59Show/hide
Query:  GLYMVAQERQLQNRARMLAESLKDVESGGSGENV
        GLYMVA ERQ QNRAR +AESL+  ES G G+NV
Subjt:  GLYMVAQERQLQNRARMLAESLKDVESGGSGENV

AT3G15395.4 unknown protein8.4e-0670.59Show/hide
Query:  GLYMVAQERQLQNRARMLAESLKDVESGGSGENV
        GLYMVA ERQ QNRAR +AESL+  ES G G+NV
Subjt:  GLYMVAQERQLQNRARMLAESLKDVESGGSGENV

AT5G53800.1 unknown protein1.4e-0544.93Show/hide
Query:  EEVPITTRPAKEEEKKRTVLEEEEEKRRKEKK----ERGKKGAVTNSCGKYNIIKETDTWLQLPSSKDW
        EE     R  ++++KKR   +++ +K+RKEKK    E+ KKGAVT S GKY II+ETD W + P    W
Subjt:  EEVPITTRPAKEEEKKRTVLEEEEEKRRKEKK----ERGKKGAVTNSCGKYNIIKETDTWLQLPSSKDW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCGAAACGGTGAGCTATTTACTAAGAGAGGAAGTTCCGATAACGACGAGACCAGCGAAGGAAGAGGAGAAGAAGAGAACGGTGCTAGAGGAGGAGGAAGAGAAACGGAG
GAAGGAGAAGAAGGAACGAGGAAAGAAAGGAGCAGTGACGAATTCGTGCGGAAAGTACAACATTATCAAAGAAACTGATACCTGGCTGCAGCTGCCATCCAGCAAAGATT
GGACCCAGATATTGCCCTGCTGCAGCAGCCATCCAACGAAGATTGGACCTAGATATTGCCTTGTGACAGAAGAGTGTATTTTGCGGTTTGGTTTGTATATGGTTGCTCAA
GAAAGACAATTACAGAACAGGGCAAGAATGTTGGCTGAGAGTTTGAAAGACGTGGAATCAGGAGGCAGTGGTGAAAATGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATCGAAACGGTGAGCTATTTACTAAGAGAGGAAGTTCCGATAACGACGAGACCAGCGAAGGAAGAGGAGAAGAAGAGAACGGTGCTAGAGGAGGAGGAAGAGAAACGGAG
GAAGGAGAAGAAGGAACGAGGAAAGAAAGGAGCAGTGACGAATTCGTGCGGAAAGTACAACATTATCAAAGAAACTGATACCTGGCTGCAGCTGCCATCCAGCAAAGATT
GGACCCAGATATTGCCCTGCTGCAGCAGCCATCCAACGAAGATTGGACCTAGATATTGCCTTGTGACAGAAGAGTGTATTTTGCGGTTTGGTTTGTATATGGTTGCTCAA
GAAAGACAATTACAGAACAGGGCAAGAATGTTGGCTGAGAGTTTGAAAGACGTGGAATCAGGAGGCAGTGGTGAAAATGTTTAGGCCTTTTAGGGCGTTGTTGAAATGTG
AGTTCCAGACTACCTGAGATTCTCTATCTTTTGCAAAGTGCTCCCATCTCTTATGGTGGCTACAAACCAATACTGTGAGTTTCCAATAATGTGAAATAGTTAGATCCCTG
TTTATTTGTAATGAACTTGGGTTTCATCTGAATTCATGGGTTTACAATAATTATGCTGAATCAGTGTTTAGTGGGTCACTTTGAGAAATGGGATTCAGAAGCAGATGTAT
CAAAAGTTCATAATTTTAAAGACGTGCTTTTGATGTTTCACTAGTGGATGACTTTGAAGAACCCTTTCACCTTCTCCTTTGATATCATTCTTTAGGGTAAGGTACAACCT
TTTTAGTACCTCAACTTTCTTTGAAAGCCAATCTCTTTGTTACTCTAGATGAGTTTACAATAGAAAAGTCTCTGTTCATTGTAAGATCCTTAAATGAAGGAGGAATTCGT
CGAGGTTGAGAATTGTACTTTGAAATGGAAGCTGTGTCCCGCTCTTGATCTATATTTTGGAGTAGGAGTTGAGGAGTTGAATTCTTTCTTTCCCCAATAAGTTTGAATCT
TCACAAATCTCACGAGTAGTTCTCGTTGTACCATAATGGAGATTTGATTTAAACGCCATCGTTTTCTAGCATAATCTAATGATCTTAGCCATTCTTTGCTCAAGTCTCAT
CCCTCTTCCACCCAACCTTCTTTTTATCTCATCATAAAATTCCACCCCATTCTTTGTACAAAACCTATGGATCCCTCACCTTTTGTCTTTTTTTTTTAAAATTTTATCAA
GCACAGAATTCATGAAGAAAGTAAACCTTTCCTTTTTATTAGTTAAACCAATTCCTAACCATTCTTCTCCACAGACCCATAACGGAAGCAAACCAAATTCTTCCTTTGGG
AAATTGCTTATTGCCCCAACAACACATGAAAAGCTTCAACGTTGCATGCTTTAAATGGCTATTTCACACACTGGTGCACTTTTGCCACACTATTCTGGACATACCTTGTG
AGTGCCTTTGAATGGAAGGCTCCCTTCCCCGAGAAAGCTCACCTTCTCCTTGCTTCCACTTCATTGGGGGCATCCCTTTAAGAATGAGAAGAGATATCCTTGGGTTAACT
TCATCAAAGCCTTCTTGTAGGTCACATGCAACGAACAAACCACAGAACCTTTCAGGCCAAGGAAAGGCCTTTTGGGCACCTTTTGGATAGTATTACTTACTTAGCTATGT
CTTGTTGGTGTAAATTGTTACCTCTTTTTAAATCCTACACACCTTTATCTCTTCCTACCAATTGGAAAAGCTTCTATAACTCCTTTCGTTTGGGATTTCTCTCCCTTCTT
TTGTAATTTCATCCATCAATAAAATAGTTTCCTATATATTTT
Protein sequenceShow/hide protein sequence
IETVSYLLREEVPITTRPAKEEEKKRTVLEEEEEKRRKEKKERGKKGAVTNSCGKYNIIKETDTWLQLPSSKDWTQILPCCSSHPTKIGPRYCLVTEECILRFGLYMVAQ
ERQLQNRARMLAESLKDVESGGSGENV