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Carg21086 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21086
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTranslation factor GUF1 homolog, chloroplastic
Genome locationCarg_Chr07:8300701..8306458
RNA-Seq ExpressionCarg21086
SyntenyCarg21086
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0045727 - positive regulation of translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003746 - translation elongation factor activity (molecular function)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR000795 - Translational (tr)-type GTP-binding domain
IPR006297 - Elongation factor 4
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595718.1 Translation factor GUF1-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.5e-5299.11Show/hide
Query:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
        VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
Subjt:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA

Query:  DRPLRALIFDRY
        DRPLRALIFD Y
Subjt:  DRPLRALIFDRY

KAG7027682.1 Translation factor GUF1-like, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]6.7e-66100Show/hide
Query:  MTETNHKQKTAVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAI
        MTETNHKQKTAVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAI
Subjt:  MTETNHKQKTAVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAI

Query:  VERVPSPRNTADRPLRALIFDRYTTCLVISIYAYI
        VERVPSPRNTADRPLRALIFDRYTTCLVISIYAYI
Subjt:  VERVPSPRNTADRPLRALIFDRYTTCLVISIYAYI

XP_022925039.1 translation factor GUF1 homolog, chloroplastic [Cucurbita moschata]5.5e-5299.11Show/hide
Query:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
        VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
Subjt:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA

Query:  DRPLRALIFDRY
        DRPLRALIFD Y
Subjt:  DRPLRALIFDRY

XP_022966535.1 translation factor GUF1 homolog, chloroplastic [Cucurbita maxima]2.1e-5198.21Show/hide
Query:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
        VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVT EIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
Subjt:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA

Query:  DRPLRALIFDRY
        DRPLRALIFD Y
Subjt:  DRPLRALIFDRY

XP_023518730.1 translation factor GUF1 homolog, chloroplastic [Cucurbita pepo subsp. pepo]5.5e-5299.11Show/hide
Query:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
        VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
Subjt:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA

Query:  DRPLRALIFDRY
        DRPLRALIFD Y
Subjt:  DRPLRALIFDRY

TrEMBL top hitse value%identityAlignment
A0A1S3BMN9 Translation factor GUF1 homolog, chloroplastic4.7e-4993.75Show/hide
Query:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
        VSRSLAACEGALLVVDASQGVEAQTLANVYLAL+NNLEIIPVLNKIDLPGADPLRV +EIEEIVGLDCSNAIQCSAKEGIGI EILNAIVERVP PRNTA
Subjt:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA

Query:  DRPLRALIFDRY
        +RPLRALIFD Y
Subjt:  DRPLRALIFDRY

A0A6J1DVN5 Translation factor GUF1 homolog, chloroplastic1.9e-5095.54Show/hide
Query:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
        VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRV +EIEE+VGLDCSNAIQCSAKEGIGITEILNAIVERVP PRNTA
Subjt:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA

Query:  DRPLRALIFDRY
        DRPLRALIFD Y
Subjt:  DRPLRALIFDRY

A0A6J1EAZ6 Translation factor GUF1 homolog, chloroplastic2.7e-5299.11Show/hide
Query:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
        VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
Subjt:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA

Query:  DRPLRALIFDRY
        DRPLRALIFD Y
Subjt:  DRPLRALIFDRY

A0A6J1HRW4 Translation factor GUF1 homolog, chloroplastic1.0e-5198.21Show/hide
Query:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
        VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVT EIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
Subjt:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA

Query:  DRPLRALIFDRY
        DRPLRALIFD Y
Subjt:  DRPLRALIFDRY

A0A7J7DZN0 Translation factor GUF1 homolog, chloroplastic6.8e-4891.07Show/hide
Query:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
        VSRSLAACEGALLVVDASQGVEAQTLANVYLA+ENNLEIIPVLNKIDLPGA+P RV QEIEE++GLDCSNAI CSAKEGIGITEILNAIVERVP PRNTA
Subjt:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA

Query:  DRPLRALIFDRY
        D PLRALIFD Y
Subjt:  DRPLRALIFDRY

SwissProt top hitse value%identityAlignment
A5B4D2 Translation factor GUF1 homolog, chloroplastic3.5e-4988.39Show/hide
Query:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
        VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGA+P+RV+QEIEE+VGLDCS+AI CSAKEGIGITEILNAIV+R+P P +TA
Subjt:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA

Query:  DRPLRALIFDRY
        +RPLRALIFD Y
Subjt:  DRPLRALIFDRY

B8AI54 Translation factor GUF1 homolog, chloroplastic5.5e-4785.71Show/hide
Query:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
        VSRSLAACEGALLVVDASQGVEAQTLANVYLALEN+LEIIPVLNKIDLPGA+P RV QEIEEI+G+DCSNAI+CSAKEGIGITEIL+AIV ++P P+NTA
Subjt:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA

Query:  DRPLRALIFDRY
          PLRALIFD Y
Subjt:  DRPLRALIFDRY

B9F2U5 Translation factor GUF1 homolog, chloroplastic5.5e-4785.71Show/hide
Query:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
        VSRSLAACEGALLVVDASQGVEAQTLANVYLALEN+LEIIPVLNKIDLPGA+P RV QEIEEI+G+DCSNAI+CSAKEGIGITEIL+AIV ++P P+NTA
Subjt:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA

Query:  DRPLRALIFDRY
          PLRALIFD Y
Subjt:  DRPLRALIFDRY

B9GHA6 Translation factor GUF1 homolog, chloroplastic1.0e-4889.29Show/hide
Query:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
        VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGA+P RV +EIEE++GLDCSNAI CSAKEGIGITEILNAIVERVP PR+TA
Subjt:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA

Query:  DRPLRALIFDRY
          PLRALIFD Y
Subjt:  DRPLRALIFDRY

B9RHQ5 Translation factor GUF1 homolog, chloroplastic5.9e-4987.5Show/hide
Query:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
        VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPG++P RV QEIEE++GLDCSNAI+CSAKEGIGI +ILNAIVER+PSPRNTA
Subjt:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA

Query:  DRPLRALIFDRY
        + PLR LIFD Y
Subjt:  DRPLRALIFDRY

Arabidopsis top hitse value%identityAlignment
AT2G31060.1 elongation factor family protein5.4e-0531.2Show/hide
Query:  EGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSN-----------AIQCSAKEG--------------IGIT
        EGA+LVVDA +G  AQT   +  AL+  L  I +LNK+D P     R   E+E +V    +N            +  SAKEG                + 
Subjt:  EGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSN-----------AIQCSAKEG--------------IGIT

Query:  EILNAIVERVPSPRNTADRPLRALI
        ++L+A+V  V  P+   D P   L+
Subjt:  EILNAIVERVPSPRNTADRPLRALI

AT2G31060.2 elongation factor family protein1.8e-0530.83Show/hide
Query:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSN-----------AIQCSAKEG----------
        V R +   EGA+LVVDA +G  AQT   +  AL+  L  I +LNK+D P     R   E+E +V    +N            +  SAKEG          
Subjt:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSN-----------AIQCSAKEG----------

Query:  ----IGITEILNAIVERVPSPRNTADRPLRALI
              + ++L+A+V  V  P+   D P   L+
Subjt:  ----IGITEILNAIVERVPSPRNTADRPLRALI

AT2G31060.3 elongation factor family protein1.8e-0530.83Show/hide
Query:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSN-----------AIQCSAKEG----------
        V R +   EGA+LVVDA +G  AQT   +  AL+  L  I +LNK+D P     R   E+E +V    +N            +  SAKEG          
Subjt:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSN-----------AIQCSAKEG----------

Query:  ----IGITEILNAIVERVPSPRNTADRPLRALI
              + ++L+A+V  V  P+   D P   L+
Subjt:  ----IGITEILNAIVERVPSPRNTADRPLRALI

AT5G08650.1 Small GTP-binding protein1.9e-4783.93Show/hide
Query:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
        VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGA+P +V +EIEE++GLDCS AI CSAKEGIGITEIL+AIV+R+P+P +TA
Subjt:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA

Query:  DRPLRALIFDRY
         +PLRALIFD Y
Subjt:  DRPLRALIFDRY

AT5G39900.1 Small GTP-binding protein8.2e-3054.46Show/hide
Query:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA
        VSRSL+AC+GALLVVDA+QGV+AQT+AN YLA E NL I+PV+NKID P ADP RV  +++ +  LD  + +  SAK G+G+  +L A++ER+P P   +
Subjt:  VSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNTA

Query:  DRPLRALIFDRY
        + PLR L+FD +
Subjt:  DRPLRALIFDRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGAAACTAACCACAAGCAGAAGACAGCGGTTTCTCGATCTCTTGCTGCATGTGAAGGTGCTCTTCTTGTTGTAGATGCTTCCCAGGGTGTGGAGGCACAGACGCT
GGCAAATGTCTATTTGGCTCTGGAGAACAACCTAGAAATTATTCCTGTTTTAAATAAAATTGATCTTCCAGGTGCTGATCCACTTCGTGTTACACAGGAGATTGAAGAGA
TTGTGGGTCTTGATTGTAGTAATGCGATACAATGTTCAGCAAAGGAGGGGATAGGTATAACTGAAATTTTAAATGCGATTGTTGAAAGGGTTCCTTCACCTCGTAATACT
GCTGATAGGCCACTCAGAGCATTAATATTTGATAGGTATACAACTTGCTTAGTTATCTCTATATATGCTTATATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTGAAACTAACCACAAGCAGAAGACAGCGGTTTCTCGATCTCTTGCTGCATGTGAAGGTGCTCTTCTTGTTGTAGATGCTTCCCAGGGTGTGGAGGCACAGACGCT
GGCAAATGTCTATTTGGCTCTGGAGAACAACCTAGAAATTATTCCTGTTTTAAATAAAATTGATCTTCCAGGTGCTGATCCACTTCGTGTTACACAGGAGATTGAAGAGA
TTGTGGGTCTTGATTGTAGTAATGCGATACAATGTTCAGCAAAGGAGGGGATAGGTATAACTGAAATTTTAAATGCGATTGTTGAAAGGGTTCCTTCACCTCGTAATACT
GCTGATAGGCCACTCAGAGCATTAATATTTGATAGGTATACAACTTGCTTAGTTATCTCTATATATGCTTATATTTAA
Protein sequenceShow/hide protein sequence
MTETNHKQKTAVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEIVGLDCSNAIQCSAKEGIGITEILNAIVERVPSPRNT
ADRPLRALIFDRYTTCLVISIYAYI