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Carg21088 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21088
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHelicase ATP-binding domain-containing protein
Genome locationCarg_Chr07:8296970..8297622
RNA-Seq ExpressionCarg21088
SyntenyCarg21088
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003824 - catalytic activity (molecular function)
GO:0043167 - ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5932129.1 hypothetical protein HYC85_028300 [Camellia sinensis]1.1e-0438.55Show/hide
Query:  TCDMCWKLHAIPANRKSIKQGEKSTNQHSFSTNVVDTNPFNTEQVDQIMKLLKAQIGTNRKLSLSSLLSQLISVDYRKRKQTI
        T + CWK+H  P N KS KQGEK  N+   + N  D+ PFN EQ+DQ++KL+K+       L           V +R +KQ +
Subjt:  TCDMCWKLHAIPANRKSIKQGEKSTNQHSFSTNVVDTNPFNTEQVDQIMKLLKAQIGTNRKLSLSSLLSQLISVDYRKRKQTI

KAF5955000.1 hypothetical protein HYC85_007856 [Camellia sinensis]1.4e-0445.16Show/hide
Query:  TCDMCWKLHAIPANRKSIKQGEKSTNQHSFSTNVVDTNPFNTEQVDQIMKLLKAQIGTNRKL
        T + CWK+H  P N KS KQGEK  N+   + N  D+ PFN EQ+DQ++KL+K+   +  +L
Subjt:  TCDMCWKLHAIPANRKSIKQGEKSTNQHSFSTNVVDTNPFNTEQVDQIMKLLKAQIGTNRKL

KAG7027681.1 hypothetical protein SDJN02_11696, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-85100Show/hide
Query:  MLNSMRLEVEYLVKLISQLLMNFNLNCTRKRMLRLRRNPLIQLKVLQFLKLLPSRLLKNQTRRIKSLVFGVTTCDMCWKLHAIPANRKSIKQGEKSTNQH
        MLNSMRLEVEYLVKLISQLLMNFNLNCTRKRMLRLRRNPLIQLKVLQFLKLLPSRLLKNQTRRIKSLVFGVTTCDMCWKLHAIPANRKSIKQGEKSTNQH
Subjt:  MLNSMRLEVEYLVKLISQLLMNFNLNCTRKRMLRLRRNPLIQLKVLQFLKLLPSRLLKNQTRRIKSLVFGVTTCDMCWKLHAIPANRKSIKQGEKSTNQH

Query:  SFSTNVVDTNPFNTEQVDQIMKLLKAQIGTNRKLSLSSLLSQLISVDYRKRKQTIRLTSYITLHWVLYVPIR
        SFSTNVVDTNPFNTEQVDQIMKLLKAQIGTNRKLSLSSLLSQLISVDYRKRKQTIRLTSYITLHWVLYVPIR
Subjt:  SFSTNVVDTNPFNTEQVDQIMKLLKAQIGTNRKLSLSSLLSQLISVDYRKRKQTIRLTSYITLHWVLYVPIR

TYK23156.1 uncharacterized protein E5676_scaffold142G001750 [Cucumis melo var. makuwa]1.9e-0437.21Show/hide
Query:  TCDMCWKLHAIPANRKSIKQGEKSTNQHSFSTNVVDTNPFNTEQVDQIMKLLKAQIGTNR---KLSLSSLLSQLISVDYRKRKQTI
        T + CWKLH  P N K  K GE++++ H+ + N+ D+N F  EQ+D I+KLLK    ++     L+ SS + + IS+  +   +TI
Subjt:  TCDMCWKLHAIPANRKSIKQGEKSTNQHSFSTNVVDTNPFNTEQVDQIMKLLKAQIGTNR---KLSLSSLLSQLISVDYRKRKQTI

XP_028105813.1 uncharacterized protein LOC114304864 [Camellia sinensis]1.9e-0450Show/hide
Query:  TCDMCWKLHAIPANRKSIKQGEKSTNQHSFSTNVVDTNPFNTEQVDQIMKLLKA
        T + CWK+H  P N KS KQGEK  N+   + N  D+ PFN EQ+DQ++KL+K+
Subjt:  TCDMCWKLHAIPANRKSIKQGEKSTNQHSFSTNVVDTNPFNTEQVDQIMKLLKA

TrEMBL top hitse value%identityAlignment
A0A5D3DHP9 Uncharacterized protein9.0e-0537.21Show/hide
Query:  TCDMCWKLHAIPANRKSIKQGEKSTNQHSFSTNVVDTNPFNTEQVDQIMKLLKAQIGTNR---KLSLSSLLSQLISVDYRKRKQTI
        T + CWKLH  P N K  K GE++++ H+ + N+ D+N F  EQ+D I+KLLK    ++     L+ SS + + IS+  +   +TI
Subjt:  TCDMCWKLHAIPANRKSIKQGEKSTNQHSFSTNVVDTNPFNTEQVDQIMKLLKAQIGTNR---KLSLSSLLSQLISVDYRKRKQTI

A0A6P6FS88 uncharacterized protein LOC1124899584.5e-0446.3Show/hide
Query:  TCDMCWKLHAIPANRKSIKQGEKSTNQHSFSTNVVDTNPFNTEQVDQIMKLLKA
        TC+ CW +H  PAN KS K G+K+T+  + S N  +++PF+ EQ+D + KLLK+
Subjt:  TCDMCWKLHAIPANRKSIKQGEKSTNQHSFSTNVVDTNPFNTEQVDQIMKLLKA

A0A7J7FV14 Helicase ATP-binding domain-containing protein5.3e-0538.55Show/hide
Query:  TCDMCWKLHAIPANRKSIKQGEKSTNQHSFSTNVVDTNPFNTEQVDQIMKLLKAQIGTNRKLSLSSLLSQLISVDYRKRKQTI
        T + CWK+H  P N KS KQGEK  N+   + N  D+ PFN EQ+DQ++KL+K+       L           V +R +KQ +
Subjt:  TCDMCWKLHAIPANRKSIKQGEKSTNQHSFSTNVVDTNPFNTEQVDQIMKLLKAQIGTNRKLSLSSLLSQLISVDYRKRKQTI

A0A7J7HQ55 Uncharacterized protein6.9e-0545.16Show/hide
Query:  TCDMCWKLHAIPANRKSIKQGEKSTNQHSFSTNVVDTNPFNTEQVDQIMKLLKAQIGTNRKL
        T + CWK+H  P N KS KQGEK  N+   + N  D+ PFN EQ+DQ++KL+K+   +  +L
Subjt:  TCDMCWKLHAIPANRKSIKQGEKSTNQHSFSTNVVDTNPFNTEQVDQIMKLLKAQIGTNRKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAATTCAATGAGGTTAGAGGTAGAATACTTGGTAAAACTAATCTCTCAACTACTCATGAATTTTAATCTAAACTGCACGAGGAAGAGAATGTTAAGATTGAGAAG
AAACCCACTGATTCAATTGAAAGTTCTTCAGTTTTTGAAGCTATTGCCGTCGAGACTTTTGAAAAATCAAACAAGACGCATAAAAAGCCTTGTGTTTGGTGTGACTACTT
GTGATATGTGTTGGAAACTTCATGCAATACCCGCAAACAGGAAAAGTATTAAGCAAGGTGAGAAGAGCACCAATCAACATTCTTTCAGCACTAATGTTGTTGACACCAAC
CCATTCAATACAGAGCAAGTTGATCAAATCATGAAACTGCTAAAGGCACAAATAGGCACGAATAGGAAATTATCCTTGAGCTCTCTCTTGTCTCAACTCATCTCTGTGGA
TTATAGAAAACGAAAACAAACTATTAGATTGACCTCATACATTACTTTACATTGGGTTCTTTATGTTCCTATTAGG
mRNA sequenceShow/hide mRNA sequence
ATGCTGAATTCAATGAGGTTAGAGGTAGAATACTTGGTAAAACTAATCTCTCAACTACTCATGAATTTTAATCTAAACTGCACGAGGAAGAGAATGTTAAGATTGAGAAG
AAACCCACTGATTCAATTGAAAGTTCTTCAGTTTTTGAAGCTATTGCCGTCGAGACTTTTGAAAAATCAAACAAGACGCATAAAAAGCCTTGTGTTTGGTGTGACTACTT
GTGATATGTGTTGGAAACTTCATGCAATACCCGCAAACAGGAAAAGTATTAAGCAAGGTGAGAAGAGCACCAATCAACATTCTTTCAGCACTAATGTTGTTGACACCAAC
CCATTCAATACAGAGCAAGTTGATCAAATCATGAAACTGCTAAAGGCACAAATAGGCACGAATAGGAAATTATCCTTGAGCTCTCTCTTGTCTCAACTCATCTCTGTGGA
TTATAGAAAACGAAAACAAACTATTAGATTGACCTCATACATTACTTTACATTGGGTTCTTTATGTTCCTATTAGG
Protein sequenceShow/hide protein sequence
MLNSMRLEVEYLVKLISQLLMNFNLNCTRKRMLRLRRNPLIQLKVLQFLKLLPSRLLKNQTRRIKSLVFGVTTCDMCWKLHAIPANRKSIKQGEKSTNQHSFSTNVVDTN
PFNTEQVDQIMKLLKAQIGTNRKLSLSSLLSQLISVDYRKRKQTIRLTSYITLHWVLYVPIR