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Carg21124 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21124
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description39S ribosomal protein L46, mitochondrial-like isoform X2
Genome locationCarg_Chr07:8025925..8027172
RNA-Seq ExpressionCarg21124
SyntenyCarg21124
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR040008 - 39S ribosomal protein L46, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595682.1 39S ribosomal protein L46, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]6.5e-34100Show/hide
Query:  MKFRMQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
        MKFRMQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
Subjt:  MKFRMQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR

KAG7027644.1 hypothetical protein SDJN02_11659 [Cucurbita argyrosperma subsp. argyrosperma]6.5e-34100Show/hide
Query:  MKFRMQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
        MKFRMQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
Subjt:  MKFRMQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR

XP_022925096.1 39S ribosomal protein L46, mitochondrial-like isoform X1 [Cucurbita moschata]5.2e-3198.63Show/hide
Query:  MQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
        MQSSFSL GQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
Subjt:  MQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR

XP_022925098.1 39S ribosomal protein L46, mitochondrial-like isoform X2 [Cucurbita moschata]1.4e-3198.65Show/hide
Query:  RMQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
        RMQSSFSL GQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
Subjt:  RMQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR

XP_022966446.1 39S ribosomal protein L46, mitochondrial-like isoform X1 [Cucurbita maxima]1.4e-3198.65Show/hide
Query:  RMQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
        RMQSSFSL GQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
Subjt:  RMQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR

TrEMBL top hitse value%identityAlignment
A0A6J1EB49 39S ribosomal protein L46, mitochondrial-like isoform X32.5e-3198.63Show/hide
Query:  MQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
        MQSSFSL GQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
Subjt:  MQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR

A0A6J1EB89 39S ribosomal protein L46, mitochondrial-like isoform X12.5e-3198.63Show/hide
Query:  MQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
        MQSSFSL GQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
Subjt:  MQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR

A0A6J1EEA2 39S ribosomal protein L46, mitochondrial-like isoform X26.6e-3298.65Show/hide
Query:  RMQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
        RMQSSFSL GQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
Subjt:  RMQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR

A0A6J1HPC7 39S ribosomal protein L46, mitochondrial-like isoform X16.6e-3298.65Show/hide
Query:  RMQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
        RMQSSFSL GQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
Subjt:  RMQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR

A0A6J1HRN8 39S ribosomal protein L46, mitochondrial-like isoform X22.5e-3198.63Show/hide
Query:  MQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
        MQSSFSL GQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
Subjt:  MQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G14620.1 decoy8.0e-2279.37Show/hide
Query:  LVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
        L  RRGF T+S+KIVASVLFERL VVIPK DP VYAFQEFKF WQQQ+RRRYPDEFLD A  R
Subjt:  LVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR

AT1G14620.2 decoy8.0e-2279.37Show/hide
Query:  LVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR
        L  RRGF T+S+KIVASVLFERL VVIPK DP VYAFQEFKF WQQQ+RRRYPDEFLD A  R
Subjt:  LVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTCAGAATGCAGAGCTCGTTTAGTTTAACCGGTCAGCTGGTGAAGAGGCGAGGATTTTCGACGAATTCCGAGAAAATTGTGGCGTCTGTTCTGTTCGAGAGGCT
TCCAGTCGTGATTCCGAAGATTGATCCTGTTGTCTATGCGTTTCAGGAGTTCAAGTTTAGGTGGCAACAGCAATATCGACGCAGATATCCTGACGAATTTCTAGATAAAG
CTAATGCCAGGTAA
mRNA sequenceShow/hide mRNA sequence
TTTTGGATTCATGAAGTTCAGAATGCAGAGCTCGTTTAGTTTAACCGGTCAGCTGGTGAAGAGGCGAGGATTTTCGACGAATTCCGAGAAAATTGTGGCGTCTGTTCTGT
TCGAGAGGCTTCCAGTCGTGATTCCGAAGATTGATCCTGTTGTCTATGCGTTTCAGGAGTTCAAGTTTAGGTGGCAACAGCAATATCGACGCAGATATCCTGACGAATTT
CTAGATAAAGCTAATGCCAGGTAAATGATCTACCATTTCGTTATGCTGTGTCCACTACATGATTTTGGTTTATGAGTTCTTTTAATTTATCTTTTTCAACTTTCTTTTTA
ATTCTTGTGCTATTTTAAGCACCATGTTCTGTATAGTGCTCTTTTAATCTATTTTTCATCTAATATCATTATCAGTGACAATTGAAGTAGCTATATATTAGGTATATCAT
ATTTGAGCTTATTTTATTCTTAAAGATGTAGGACAATTTTTTGTGGGCTACTAGGGTCGTGCCAGTTGAGTCCAAACTTTGAACAACACTTTCTAAGGTTCCTTTCCATT
ACAGTGAGTTTTAACGGATTATAATGCTCGATTATAGTGTTTCCATATACATGGTGCAAAAGAATTTTGAAAAACTGAAGTAATACCTTCGGAGTGTAACGACCCTAATT
TCCTATTAAAATCAAGGTTGCCACAGGTTCAATCCGATCTAGGATGTCGAAGGGTCTGATGAAGCGAGGGGCTCAGCTTGCCCTTTCGTCAACCTCAAGACACCTTCCAT
TGGGGTCACCTTCAAAAAAATACTTTATTGCCTACTTCGAACTCCAGATTCCTATGCCTCATGTTGATGTAACTTTTCTGCCTACTTTGAGTCGCCCATGATCTTTTGTA
CAACCTCATTGATGGCTTTGACTAATTCTGGCCCTAACAACTCATGTTCGCCTACTTCGTCCCAGCATATCGGGGTCTTGCACCGCTTTCCGCATAAAGCTTCAAACTAT
GC
Protein sequenceShow/hide protein sequence
MKFRMQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANAR