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Carg21126 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21126
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionThreonine-tRNA ligase
Genome locationCarg_Chr07:8018252..8018540
RNA-Seq ExpressionCarg21126
SyntenyCarg21126
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595681.1 hypothetical protein SDJN03_12234, partial [Cucurbita argyrosperma subsp. sororia]4.8e-1887.69Show/hide
Query:  DAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGTH
        DAHDEEHLKTISELQSKLDSANEALIAEQKK        AEMVAAENAKLQYRILHLVRAARGTH
Subjt:  DAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGTH

KAG7027642.1 hypothetical protein SDJN02_11657, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-29100Show/hide
Query:  MTQTCMNVDAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGTH
        MTQTCMNVDAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGTH
Subjt:  MTQTCMNVDAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGTH

XP_022153876.1 uncharacterized protein LOC111021288 [Momordica charantia]6.0e-1373.85Show/hide
Query:  DAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGTH
        D  DEEHLKTI+ELQSKLDSANEALIAE+KK        AE+VAAENAKLQYRI+HLVR AR  H
Subjt:  DAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGTH

XP_022925102.1 uncharacterized protein LOC111432443 [Cucurbita moschata]4.0e-1787.5Show/hide
Query:  DAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGT
        DAHDEEHLKTISELQSKLDSANEALIAEQKK        AEMVAAENAKLQYRILHLVRAARGT
Subjt:  DAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGT

XP_022966502.1 uncharacterized protein LOC111466136 [Cucurbita maxima]4.8e-1887.69Show/hide
Query:  DAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGTH
        DAHDEEHLKTISELQSKLDSANEALIAEQKK        AEMVAAENAKLQYRILHLVRAARGTH
Subjt:  DAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGTH

TrEMBL top hitse value%identityAlignment
A0A1S3CLW0 uncharacterized protein LOC103502450 isoform X26.5e-1372.31Show/hide
Query:  DAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGTH
        D H+EEHLKTISELQ+KLDSAN ALI E+KK        AEMVA ENAKLQYRI+HLVR AR TH
Subjt:  DAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGTH

A0A445AHR7 Uncharacterized protein3.1e-0756.45Show/hide
Query:  DAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAAR
        DA +EEHLKTI++LQSKL+ +N  LI+E++K   + L +A+ +AAEN KLQYRI+HL+RA +
Subjt:  DAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAAR

A0A6J1DM00 uncharacterized protein LOC1110212882.9e-1373.85Show/hide
Query:  DAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGTH
        D  DEEHLKTI+ELQSKLDSANEALIAE+KK        AE+VAAENAKLQYRI+HLVR AR  H
Subjt:  DAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGTH

A0A6J1EAW7 uncharacterized protein LOC1114324432.0e-1787.5Show/hide
Query:  DAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGT
        DAHDEEHLKTISELQSKLDSANEALIAEQKK        AEMVAAENAKLQYRILHLVRAARGT
Subjt:  DAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGT

A0A6J1HN54 uncharacterized protein LOC1114661362.3e-1887.69Show/hide
Query:  DAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGTH
        DAHDEEHLKTISELQSKLDSANEALIAEQKK        AEMVAAENAKLQYRILHLVRAARGTH
Subjt:  DAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACAAACATGTATGAATGTAGATGCCCACGACGAGGAACATCTTAAAACGATAAGCGAACTCCAGTCGAAGCTAGACAGCGCAAATGAAGCGCTAATTGCAGAACA
GAAAAAGGCAAGTAGCATTTGTTTGTTGTTTGCTGAGATGGTTGCTGCAGAAAATGCAAAGCTCCAGTATCGCATACTCCATCTTGTGAGGGCAGCAAGGGGAACACATT
AA
mRNA sequenceShow/hide mRNA sequence
ATGACACAAACATGTATGAATGTAGATGCCCACGACGAGGAACATCTTAAAACGATAAGCGAACTCCAGTCGAAGCTAGACAGCGCAAATGAAGCGCTAATTGCAGAACA
GAAAAAGGCAAGTAGCATTTGTTTGTTGTTTGCTGAGATGGTTGCTGCAGAAAATGCAAAGCTCCAGTATCGCATACTCCATCTTGTGAGGGCAGCAAGGGGAACACATT
AA
Protein sequenceShow/hide protein sequence
MTQTCMNVDAHDEEHLKTISELQSKLDSANEALIAEQKKASSICLLFAEMVAAENAKLQYRILHLVRAARGTH