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Carg21150 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21150
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPolyamine-modulated factor 1-binding protein
Genome locationCarg_Chr01:10936882..10937743
RNA-Seq ExpressionCarg21150
SyntenyCarg21150
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037542.1 hypothetical protein SDJN02_01170, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-37100Show/hide
Query:  MELLRSSGSGISAMATSDSKPDDRSISSPETELLPESESQLSVLVYDMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNNGGGTL
        MELLRSSGSGISAMATSDSKPDDRSISSPETELLPESESQLSVLVYDMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNNGGGTL
Subjt:  MELLRSSGSGISAMATSDSKPDDRSISSPETELLPESESQLSVLVYDMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNNGGGTL

XP_004136463.2 uncharacterized protein LOC101215419 [Cucumis sativus]9.7e-1857.43Show/hide
Query:  MATSDSKPDDRSISSPETELLPESESQLSVLVY-----------------------------DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNNGG
        MATS+SKP+D+ I  PE+E LPESESQLS L++                             D+EKCR SALDRKGVLEEEKQQFQQAAYTVLD+LNNGG
Subjt:  MATSDSKPDDRSISSPETELLPESESQLSVLVY-----------------------------DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNNGG

Query:  G
        G
Subjt:  G

XP_022937053.1 uncharacterized protein LOC111443468 [Cucurbita moschata]4.8e-1757.14Show/hide
Query:  MATSDSKPDDRSISSPETELLP--ESESQLSVLVY-----------------------------DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNN
        MA+S+SKP+D+ I  PE+E LP  ESESQLSVL++                             D+EKCR SALDRKGVLEEEKQQFQQAAYTVLD+LNN
Subjt:  MATSDSKPDDRSISSPETELLP--ESESQLSVLVY-----------------------------DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNN

Query:  GGGTL
        GGGTL
Subjt:  GGGTL

XP_023524409.1 uncharacterized protein LOC111788313 [Cucurbita pepo subsp. pepo]1.5e-1858.41Show/hide
Query:  MELLRSSGSGISAMATSDSKPDDRSISSPETELLPESESQLSVLVYDMEKCRRSALDR--------------------------KGVLEEEKQQFQQAAY
        MELLRSS SGISAMATS+SKPDDRSIS      LPESESQLSVLVYD+ +  + A++                             VLEEEKQQFQQAAY
Subjt:  MELLRSSGSGISAMATSDSKPDDRSISSPETELLPESESQLSVLVYDMEKCRRSALDR--------------------------KGVLEEEKQQFQQAAY

Query:  TVLDLLNNGGGTL
        TVLD+LNNGGGTL
Subjt:  TVLDLLNNGGGTL

XP_023535872.1 uncharacterized protein LOC111797169 [Cucurbita pepo subsp. pepo]6.3e-1757.14Show/hide
Query:  MATSDSKPDDRSISSPETELLP--ESESQLSVLVY-----------------------------DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNN
        MA+S+SKP+D  I  PE+E LP  ESESQLSVL++                             D+EKCR SALDRKGVLEEEKQQFQQAAYTVLD+LNN
Subjt:  MATSDSKPDDRSISSPETELLP--ESESQLSVLVY-----------------------------DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNN

Query:  GGGTL
        GGGTL
Subjt:  GGGTL

TrEMBL top hitse value%identityAlignment
A0A0A0LJE0 Uncharacterized protein4.7e-1857.43Show/hide
Query:  MATSDSKPDDRSISSPETELLPESESQLSVLVY-----------------------------DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNNGG
        MATS+SKP+D+ I  PE+E LPESESQLS L++                             D+EKCR SALDRKGVLEEEKQQFQQAAYTVLD+LNNGG
Subjt:  MATSDSKPDDRSISSPETELLPESESQLSVLVY-----------------------------DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNNGG

Query:  G
        G
Subjt:  G

A0A1S3CR82 uncharacterized protein LOC1035037846.8e-1756.73Show/hide
Query:  MATSDSKPDDRSISSPETELLPESESQLSVLVY-----------------------------DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNN-G
        MATS+SKP+D+ I  PE E LPE ESQLS L++                             D+EKCR SALDRKGVLEEEKQQFQQAAYTVLD+LNN G
Subjt:  MATSDSKPDDRSISSPETELLPESESQLSVLVY-----------------------------DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNN-G

Query:  GGTL
        GGTL
Subjt:  GGTL

A0A5A7TBQ0 Uncharacterized protein6.8e-1756.73Show/hide
Query:  MATSDSKPDDRSISSPETELLPESESQLSVLVY-----------------------------DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNN-G
        MATS+SKP+D+ I  PE E LPE ESQLS L++                             D+EKCR SALDRKGVLEEEKQQFQQAAYTVLD+LNN G
Subjt:  MATSDSKPDDRSISSPETELLPESESQLSVLVY-----------------------------DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNN-G

Query:  GGTL
        GGTL
Subjt:  GGTL

A0A6J1FEZ1 uncharacterized protein LOC1114434682.3e-1757.14Show/hide
Query:  MATSDSKPDDRSISSPETELLP--ESESQLSVLVY-----------------------------DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNN
        MA+S+SKP+D+ I  PE+E LP  ESESQLSVL++                             D+EKCR SALDRKGVLEEEKQQFQQAAYTVLD+LNN
Subjt:  MATSDSKPDDRSISSPETELLP--ESESQLSVLVY-----------------------------DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNN

Query:  GGGTL
        GGGTL
Subjt:  GGGTL

A0A6J1IGC1 uncharacterized protein LOC1114766763.4e-1656.19Show/hide
Query:  MATSDSKPDDRSISSPETELLPESES--QLSVLVY-----------------------------DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNN
        MA+S+SKP D+ I  PE+E L ESES  QLSVL++                             D+EKCR SALDRKGVLEEEKQQFQQAAYTVLD+LNN
Subjt:  MATSDSKPDDRSISSPETELLPESES--QLSVLVY-----------------------------DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNN

Query:  GGGTL
        GGGTL
Subjt:  GGGTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G25570.1 unknown protein1.8e-0653.85Show/hide
Query:  DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNNGGG
        ++EK +  A+++K +LEEEK QFQ+AAYT+LD+L+N  G
Subjt:  DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNNGGG

AT5G25570.2 unknown protein1.8e-0653.85Show/hide
Query:  DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNNGGG
        ++EK +  A+++K +LEEEK QFQ+AAYT+LD+L+N  G
Subjt:  DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNNGGG

AT5G25570.3 unknown protein1.8e-0653.85Show/hide
Query:  DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNNGGG
        ++EK +  A+++K +LEEEK QFQ+AAYT+LD+L+N  G
Subjt:  DMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNNGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTCCTTCGTTCATCTGGTTCCGGCATCTCTGCGATGGCGACTTCCGATTCAAAACCCGACGATCGGTCTATTTCGTCGCCGGAAACTGAGTTGTTGCCGGAATC
TGAATCGCAGCTCTCAGTTCTGGTCTACGACATGGAAAAGTGCAGGCGTTCTGCTCTCGACAGGAAGGGAGTCCTAGAGGAAGAGAAACAACAATTTCAACAAGCTGCTT
ACACTGTTTTAGACTTGCTCAACAACGGAGGGGGAACGCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTCCTTCGTTCATCTGGTTCCGGCATCTCTGCGATGGCGACTTCCGATTCAAAACCCGACGATCGGTCTATTTCGTCGCCGGAAACTGAGTTGTTGCCGGAATC
TGAATCGCAGCTCTCAGTTCTGGTCTACGACATGGAAAAGTGCAGGCGTTCTGCTCTCGACAGGAAGGGAGTCCTAGAGGAAGAGAAACAACAATTTCAACAAGCTGCTT
ACACTGTTTTAGACTTGCTCAACAACGGAGGGGGAACGCTGTAA
Protein sequenceShow/hide protein sequence
MELLRSSGSGISAMATSDSKPDDRSISSPETELLPESESQLSVLVYDMEKCRRSALDRKGVLEEEKQQFQQAAYTVLDLLNNGGGTL