; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg21156 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21156
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionreplication protein A 32 kDa subunit A-like
Genome locationCarg_Chr01:10967336..10971468
RNA-Seq ExpressionCarg21156
SyntenyCarg21156
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 - Nucleic acid-binding, OB-fold
IPR014646 - Replication factor A protein 2
IPR014892 - Replication protein A, C-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040260 - Replication factor A protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024504.1 Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosperma]1.3e-9671.59Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQT DSS +K+RETPG+VP TVKQISEASH GEEKANF INGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVL-------------IAGADVDSSASNFFLFLTIF----
        DTKQMDEIQDGMY+RV GHLKIFQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ L             I    + + +S +    ++     
Subjt:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVL-------------IAGADVDSSASNFFLFLTIF----

Query:  ---------------------CRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA
                               AKERGIHRDELSQQLKIP++KI++SIR+LEDEGLIYSTIDE+HFKSAA
Subjt:  ---------------------CRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA

KAG7037548.1 Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosperma]7.6e-126100Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLIAGADVDSSASNFFLFLTIFCRAKERGIHRDELSQQL
        DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLIAGADVDSSASNFFLFLTIFCRAKERGIHRDELSQQL
Subjt:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLIAGADVDSSASNFFLFLTIFCRAKERGIHRDELSQQL

Query:  KIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAAA
        KIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAAA
Subjt:  KIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAAA

XP_022936562.1 replication protein A 32 kDa subunit A-like [Cucurbita moschata]5.1e-9872.32Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQTNDSS +K+RETPG+VP TVKQISEASH GEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVL-------------IAGADVDSSASNFFLFLTIF----
        DTKQMDEIQDGMY+RV GHLKIFQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ L             I    + + +S +    ++     
Subjt:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVL-------------IAGADVDSSASNFFLFLTIF----

Query:  ---------------------CRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA
                               AKERGIHRDELSQQLKIP++KI++SIR+LEDEGLIYSTIDE+HFKSAA
Subjt:  ---------------------CRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA

XP_022976184.1 replication protein A 32 kDa subunit A-like [Cucurbita maxima]1.7e-9671.06Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFT SQTNDSS +K+RETPG+VP TVKQISEASH GEEKANF INGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVL-------------IAGADVDSSASNFFLFLTIFCR--
        DTKQMDEIQDGMY+RV GHLKIFQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ L             I    + + +S +    ++     
Subjt:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVL-------------IAGADVDSSASNFFLFLTIFCR--

Query:  -------------------------AKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA
                                 AKERGIHRDELSQQLKIP++KI++SIR+LEDEGLIYSTIDE+HFKSAA
Subjt:  -------------------------AKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA

XP_023524340.1 replication protein A 32 kDa subunit A-like [Cucurbita pepo subsp. pepo]2.4e-10378.23Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASH GEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ------------------VLIAGA---------------
        DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ                   + +G+               
Subjt:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ------------------VLIAGA---------------

Query:  --DVDSSASNFFL-FLTI-FCRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAAA
          DV  +     L +L +    AKERGIHRDELSQQLKIPL+KIVDSIR+LEDEGLIYSTIDEYHFKSAAA
Subjt:  --DVDSSASNFFL-FLTI-FCRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAAA

TrEMBL top hitse value%identityAlignment
A0A0A0LEG7 Uncharacterized protein1.2e-9571.59Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSS+QFDS SGFTSSQTNDSS +KSRE+PG++PVTVKQISEASH GEEKANFVINGVDITNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLIAG----------------------------------
        DT QM+EIQDGMYVRV GHLK+FQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ L                                     
Subjt:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLIAG----------------------------------

Query:  --ADVDSSASNFFL-FLTI-FCRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA
           DV  S     L +L +    AKERGIH+DELSQQLK+P++KI+DSIR+LEDEGLIYSTIDE+HFKSAA
Subjt:  --ADVDSSASNFFL-FLTI-FCRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA

A0A1S3CR64 replication protein A 32 kDa subunit A-like1.4e-9671.96Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSS+QFDSGSGFTSSQTNDSS +KSRE+PG+VPVTVKQISEASH GEEKANFVIN VDITNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVL-------------IAGADVDSSASNFFLFLTIF----
        DTKQM+EIQDGMYVRV GHLK+FQSNKQIFAFSVRPVTNFDEITFHF+ECIHDHLRNSKLQ L             I    V + +S +    +      
Subjt:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVL-------------IAGADVDSSASNFFLFLTIF----

Query:  ---------------------CRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA
                               AKERGIHRDELSQQLKIP++KI+DSIR+LEDEGLIYSTIDE+HFKSAA
Subjt:  ---------------------CRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA

A0A6J1CUB8 replication protein A 32 kDa subunit A4.9e-9471.11Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQ  DS+ +KSRE+PG+VPVTVKQISEA H GEEKANFVINGVDITNVTIVGKVSEKAERNTDITF+VDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVL-IAGADVDSSASNFFLFL-------------------
        DTKQMD+IQDGMY+RV GHLKIFQ N QIFAFSVRPVTN DEITFHFIECIHD+LRNSKLQ+  +A     SS S     +                   
Subjt:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVL-IAGADVDSSASNFFLFL-------------------

Query:  TIFCR-----------------AKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA
        T+  +                 AKE+GIHRDELSQQLKIPL+KI+DSIR+LEDEGLIYSTIDE+HFKSAA
Subjt:  TIFCR-----------------AKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA

A0A6J1F8S8 replication protein A 32 kDa subunit A-like2.5e-9872.32Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFTSSQTNDSS +K+RETPG+VP TVKQISEASH GEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVL-------------IAGADVDSSASNFFLFLTIF----
        DTKQMDEIQDGMY+RV GHLKIFQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ L             I    + + +S +    ++     
Subjt:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVL-------------IAGADVDSSASNFFLFLTIF----

Query:  ---------------------CRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA
                               AKERGIHRDELSQQLKIP++KI++SIR+LEDEGLIYSTIDE+HFKSAA
Subjt:  ---------------------CRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA

A0A6J1IMU1 replication protein A 32 kDa subunit A-like8.0e-9771.06Show/hide
Query:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
        MFSSSQFDSGSGFT SQTNDSS +K+RETPG+VP TVKQISEASH GEEKANF INGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF
Subjt:  MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTF

Query:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVL-------------IAGADVDSSASNFFLFLTIFCR--
        DTKQMDEIQDGMY+RV GHLKIFQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ L             I    + + +S +    ++     
Subjt:  DTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVL-------------IAGADVDSSASNFFLFLTIFCR--

Query:  -------------------------AKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA
                                 AKERGIHRDELSQQLKIP++KI++SIR+LEDEGLIYSTIDE+HFKSAA
Subjt:  -------------------------AKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA

SwissProt top hitse value%identityAlignment
Q5Z8L1 Replication protein A 32 kDa subunit C1.5e-2339.38Show/hide
Query:  SGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEA-----SHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTK
        S +G  ++     S  +     G VP TV  IS +     +  G     F I+GV+ TNV ++G+V     R+TD+ F +DD TG+I   RW+ D  DT+
Subjt:  SGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEA-----SHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTK

Query:  QMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRN--SKLQ
            IQ+G+YV+V  +L  FQ+ KQ  A S+RP+ NF+E+  HFIEC+H HL +  SK+Q
Subjt:  QMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRN--SKLQ

Q6H7J5 Replication protein A 32 kDa subunit B1.2e-3632.36Show/hide
Query:  SSSQFDSGSGFTSSQTNDSS---------LSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCK
        ++S    G GF  SQ  +++           KSR    ++P+TVKQI +AS   ++K+NF +NG++++ V +VG++  K +R TD++F +DDGTGR+   
Subjt:  SSSQFDSGSGFTSSQTNDSS---------LSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCK

Query:  RWVNDTFDTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLR---------------------------------NSKL
        RW ND+ DTK+M +IQ+G YV V G LK FQ  +Q+ A+SVR +TNF+++T HF+ C+H HL                                   ++ 
Subjt:  RWVNDTFDTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLR---------------------------------NSKL

Query:  QVLIAGADVDSSASNFFLFLTIF----CRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKS
            A  +  +  +   L L +F        + G+  D +S++L +P + +   I    D G +Y+TID++H+KS
Subjt:  QVLIAGADVDSSASNFFLFLTIF----CRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKS

Q6K9U2 Replication protein A 32 kDa subunit A4.4e-4442.03Show/hide
Query:  MFSSSQFD--SGSGFTSSQ---TNDSSLSKSRETPGVVPVTVKQISEASH---PGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGC
        M S SQ D  S S FTSSQ    + ++ SKSR     +P+TVKQISEA      GE+ A FV++GV+  NV +VG VS K ERNTD++F +DDGTGR+  
Subjt:  MFSSSQFD--SGSGFTSSQ---TNDSSLSKSRETPGVVPVTVKQISEASH---PGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGC

Query:  KRWVNDTFDTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQV---LIAGADVDSSASNFFLFLTIFCRAK--
         RWVND  D+ +   +Q+GMYV VIG LK  Q  K+  AF++RPVT+++E+T HFI+C+  HL N+K Q+       + + SS+SN F  +T     K  
Subjt:  KRWVNDTFDTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQV---LIAGADVDSSASNFFLFLTIFCRAK--

Query:  -------------------------------ERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSA
                                       E G+H DE+ ++ ++P  KI  +I  L D G IYSTIDE H+KSA
Subjt:  -------------------------------ERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSA

Q8LFJ8 Replication protein A 32 kDa subunit B2.8e-3836.26Show/hide
Query:  FSSSQFDSGSGFTSSQT-----NDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWV
        F  +   +G GF  SQ        SS  K+R+   ++P+T+KQ+S AS  GE  +NF I+GVDI  V IVG++S    R T + F+VDDGTG + C RW 
Subjt:  FSSSQFDSGSGFTSSQT-----NDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWV

Query:  NDTFDTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ-------------------VLIAGADVDSSASNFF
        +   +T++M+ ++ GMYVR+ GHLKIFQ  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+                   +        +  SN F
Subjt:  NDTFDTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ-------------------VLIAGADVDSSASNFF

Query:  -------------LFLTIFCR----AKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA
                       L    +      E G+H D ++++L+IPL ++ +++  L ++G IYST+DE  FKS A
Subjt:  -------------LFLTIFCR----AKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA

Q9ZQ19 Replication protein A 32 kDa subunit A3.0e-5645.29Show/hide
Query:  MFSSSQFD-----SGSGFTSSQ-----TNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFIVDDGTGR
        MFSSSQF+     SG GF SSQ      + SS +K+R+  G+VPVTVKQI+E      EK+  VING+ +TNV++VG V +K E + T++ F +DDGTGR
Subjt:  MFSSSQFD-----SGSGFTSSQ-----TNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFIVDDGTGR

Query:  IGCKRWVNDTFDTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLIAGADVDSSASNFF------------
        I CKRWV++TFD ++M+ ++DG YVR+ GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q    G DV  S +  F            
Subjt:  IGCKRWVNDTFDTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLIAGADVDSSASNFF------------

Query:  -------------------LFLTIF----CRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFK
                           + L       C A+++GIH DE++QQLKIP  K+   +++LE +GLIYSTIDEYHFK
Subjt:  -------------------LFLTIF----CRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFK

Arabidopsis top hitse value%identityAlignment
AT2G24490.1 replicon protein A22.1e-5745.29Show/hide
Query:  MFSSSQFD-----SGSGFTSSQ-----TNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFIVDDGTGR
        MFSSSQF+     SG GF SSQ      + SS +K+R+  G+VPVTVKQI+E      EK+  VING+ +TNV++VG V +K E + T++ F +DDGTGR
Subjt:  MFSSSQFD-----SGSGFTSSQ-----TNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFIVDDGTGR

Query:  IGCKRWVNDTFDTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLIAGADVDSSASNFF------------
        I CKRWV++TFD ++M+ ++DG YVR+ GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q    G DV  S +  F            
Subjt:  IGCKRWVNDTFDTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLIAGADVDSSASNFF------------

Query:  -------------------LFLTIF----CRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFK
                           + L       C A+++GIH DE++QQLKIP  K+   +++LE +GLIYSTIDEYHFK
Subjt:  -------------------LFLTIF----CRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFK

AT2G24490.2 replicon protein A22.1e-5745.29Show/hide
Query:  MFSSSQFD-----SGSGFTSSQ-----TNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFIVDDGTGR
        MFSSSQF+     SG GF SSQ      + SS +K+R+  G+VPVTVKQI+E      EK+  VING+ +TNV++VG V +K E + T++ F +DDGTGR
Subjt:  MFSSSQFD-----SGSGFTSSQ-----TNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFIVDDGTGR

Query:  IGCKRWVNDTFDTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLIAGADVDSSASNFF------------
        I CKRWV++TFD ++M+ ++DG YVR+ GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q    G DV  S +  F            
Subjt:  IGCKRWVNDTFDTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLIAGADVDSSASNFF------------

Query:  -------------------LFLTIF----CRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFK
                           + L       C A+++GIH DE++QQLKIP  K+   +++LE +GLIYSTIDEYHFK
Subjt:  -------------------LFLTIF----CRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFK

AT3G02920.1 Replication protein A, subunit RPA322.0e-3936.26Show/hide
Query:  FSSSQFDSGSGFTSSQT-----NDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWV
        F  +   +G GF  SQ        SS  K+R+   ++P+T+KQ+S AS  GE  +NF I+GVDI  V IVG++S    R T + F+VDDGTG + C RW 
Subjt:  FSSSQFDSGSGFTSSQT-----NDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWV

Query:  NDTFDTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ-------------------VLIAGADVDSSASNFF
        +   +T++M+ ++ GMYVR+ GHLKIFQ  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+                   +        +  SN F
Subjt:  NDTFDTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ-------------------VLIAGADVDSSASNFF

Query:  -------------LFLTIFCR----AKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA
                       L    +      E G+H D ++++L+IPL ++ +++  L ++G IYST+DE  FKS A
Subjt:  -------------LFLTIFCR----AKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA

AT3G02920.2 Replication protein A, subunit RPA325.8e-3936.73Show/hide
Query:  KSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHLKIFQ
        ++R+   ++P+T+KQ+S AS  GE  +NF I+GVDI  V IVG++S    R T + F+VDDGTG + C RW +   +T++M+ ++ GMYVR+ GHLKIFQ
Subjt:  KSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHLKIFQ

Query:  SNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ-------------------VLIAGADVDSSASNFF-------------LFLTIFCR----AKE
          + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+                   +        +  SN F               L    +      E
Subjt:  SNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ-------------------VLIAGADVDSSASNFF-------------LFLTIFCR----AKE

Query:  RGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA
         G+H D ++++L+IPL ++ +++  L ++G IYST+DE  FKS A
Subjt:  RGIHRDELSQQLKIPLKKIVDSIRALEDEGLIYSTIDEYHFKSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCCAGCAGCCAGTTTGATTCCGGCAGTGGATTTACGTCGTCTCAGACCAATGACTCCTCTTTGTCGAAGAGTCGAGAAACGCCGGGCGTGGTTCCAGTAACGGT
AAAACAGATAAGTGAAGCCTCCCATCCTGGCGAAGAGAAGGCCAACTTTGTGATCAACGGCGTCGATATTACAAATGTTACAATCGTCGGGAAGGTCTCTGAGAAAGCTG
AAAGGAATACTGACATCACATTCATTGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGGTAAACGATACTTTTGACACTAAGCAAATGGATGAAATACAAGAT
GGAATGTATGTACGGGTAATTGGGCATCTGAAAATATTTCAAAGTAACAAGCAAATATTTGCATTCTCTGTAAGGCCTGTTACAAATTTTGACGAGATTACCTTCCACTT
TATTGAATGCATACATGACCACTTGCGGAATTCCAAGTTACAGGTACTGATTGCTGGAGCCGACGTTGATAGTTCTGCTTCTAACTTCTTTTTATTTTTAACTATATTTT
GCAGAGCAAAAGAAAGAGGAATACACAGAGATGAACTGTCCCAACAACTGAAAATTCCTTTGAAGAAAATAGTGGACTCCATAAGGGCTCTTGAAGATGAAGGTTTGATA
TATTCCACCATAGATGAGTATCATTTCAAATCTGCTGCTGCATAG
mRNA sequenceShow/hide mRNA sequence
CTCTCCATTGTTGATTGTTCATTAAGTTTTTACTCGCTGAAGTTTGAAGAATGTTCTCCAGCAGCCAGTTTGATTCCGGCAGTGGATTTACGTCGTCTCAGACCAATGAC
TCCTCTTTGTCGAAGAGTCGAGAAACGCCGGGCGTGGTTCCAGTAACGGTAAAACAGATAAGTGAAGCCTCCCATCCTGGCGAAGAGAAGGCCAACTTTGTGATCAACGG
CGTCGATATTACAAATGTTACAATCGTCGGGAAGGTCTCTGAGAAAGCTGAAAGGAATACTGACATCACATTCATTGTAGATGATGGAACAGGAAGAATTGGCTGCAAAA
GATGGGTAAACGATACTTTTGACACTAAGCAAATGGATGAAATACAAGATGGAATGTATGTACGGGTAATTGGGCATCTGAAAATATTTCAAAGTAACAAGCAAATATTT
GCATTCTCTGTAAGGCCTGTTACAAATTTTGACGAGATTACCTTCCACTTTATTGAATGCATACATGACCACTTGCGGAATTCCAAGTTACAGGTACTGATTGCTGGAGC
CGACGTTGATAGTTCTGCTTCTAACTTCTTTTTATTTTTAACTATATTTTGCAGAGCAAAAGAAAGAGGAATACACAGAGATGAACTGTCCCAACAACTGAAAATTCCTT
TGAAGAAAATAGTGGACTCCATAAGGGCTCTTGAAGATGAAGGTTTGATATATTCCACCATAGATGAGTATCATTTCAAATCTGCTGCTGCATAG
Protein sequenceShow/hide protein sequence
MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQD
GMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLIAGADVDSSASNFFLFLTIFCRAKERGIHRDELSQQLKIPLKKIVDSIRALEDEGLI
YSTIDEYHFKSAAA