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Carg21188 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21188
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionL-arabinokinase-like
Genome locationCarg_Chr01:11126591..11130693
RNA-Seq ExpressionCarg21188
SyntenyCarg21188
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038731.1 L-arabinokinase-like isoform X1 [Cucumis melo var. makuwa]5.1e-1542.06Show/hide
Query:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------
        HEVHV S AP+FVFTSA+ SP LFIRK LLDCGAVQTDA+T+                                                          
Subjt:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------

Query:  ---AWDFIYAQYAMDAGHHHRSIVWQ
           +WDFIYA+Y MDAGHHHRSIVWQ
Subjt:  ---AWDFIYAQYAMDAGHHHRSIVWQ

KAG7024527.1 L-arabinokinase [Cucurbita argyrosperma subsp. argyrosperma]1.5e-1441.27Show/hide
Query:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------
        HEVHV S AP+FVFTSA+ SP LFIRK LLDCGAVQ DA+T+                                                          
Subjt:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------

Query:  ---AWDFIYAQYAMDAGHHHRSIVWQ
           +WDFIYA+Y MDAGHHHRSIVWQ
Subjt:  ---AWDFIYAQYAMDAGHHHRSIVWQ

KAG7037579.1 L-arabinokinase, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-50100Show/hide
Query:  MWSQLEAEAVSASRNSHEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITIAWDFIYAQYAMDAGHHHRSIVWQCVWRNSLSMRRRNPGAGG
        MWSQLEAEAVSASRNSHEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITIAWDFIYAQYAMDAGHHHRSIVWQCVWRNSLSMRRRNPGAGG
Subjt:  MWSQLEAEAVSASRNSHEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITIAWDFIYAQYAMDAGHHHRSIVWQCVWRNSLSMRRRNPGAGG

XP_008466276.1 PREDICTED: L-arabinokinase-like isoform X1 [Cucumis melo]5.1e-1542.06Show/hide
Query:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------
        HEVHV S AP+FVFTSA+ SP LFIRK LLDCGAVQTDA+T+                                                          
Subjt:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------

Query:  ---AWDFIYAQYAMDAGHHHRSIVWQ
           +WDFIYA+Y MDAGHHHRSIVWQ
Subjt:  ---AWDFIYAQYAMDAGHHHRSIVWQ

XP_022976245.1 L-arabinokinase-like [Cucurbita maxima]1.5e-1441.27Show/hide
Query:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------
        HEVHV S AP+FVFTSA+ SP LFIRK LLDCGAVQ DA+T+                                                          
Subjt:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------

Query:  ---AWDFIYAQYAMDAGHHHRSIVWQ
           +WDFIYA+Y MDAGHHHRSIVWQ
Subjt:  ---AWDFIYAQYAMDAGHHHRSIVWQ

TrEMBL top hitse value%identityAlignment
A0A0A0LGT8 Uncharacterized protein4.7e-1440.48Show/hide
Query:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------
        HEVHV S AP+FVFTSA+ SP L IRK LLDCGAVQ DA+T+                                                          
Subjt:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------

Query:  ---AWDFIYAQYAMDAGHHHRSIVWQ
           +WDFIYA+Y MDAGHHHRSIVWQ
Subjt:  ---AWDFIYAQYAMDAGHHHRSIVWQ

A0A1S3CQV5 L-arabinokinase-like isoform X12.5e-1542.06Show/hide
Query:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------
        HEVHV S AP+FVFTSA+ SP LFIRK LLDCGAVQTDA+T+                                                          
Subjt:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------

Query:  ---AWDFIYAQYAMDAGHHHRSIVWQ
           +WDFIYA+Y MDAGHHHRSIVWQ
Subjt:  ---AWDFIYAQYAMDAGHHHRSIVWQ

A0A5D3E5D9 L-arabinokinase-like isoform X12.5e-1542.06Show/hide
Query:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------
        HEVHV S AP+FVFTSA+ SP LFIRK LLDCGAVQTDA+T+                                                          
Subjt:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------

Query:  ---AWDFIYAQYAMDAGHHHRSIVWQ
           +WDFIYA+Y MDAGHHHRSIVWQ
Subjt:  ---AWDFIYAQYAMDAGHHHRSIVWQ

A0A6J1F9K6 L-arabinokinase-like7.2e-1541.27Show/hide
Query:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------
        HEVHV S AP+FVFTSA+ SP LFIRK LLDCGAVQ DA+T+                                                          
Subjt:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------

Query:  ---AWDFIYAQYAMDAGHHHRSIVWQ
           +WDFIYA+Y MDAGHHHRSIVWQ
Subjt:  ---AWDFIYAQYAMDAGHHHRSIVWQ

A0A6J1IIX7 L-arabinokinase-like7.2e-1541.27Show/hide
Query:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------
        HEVHV S AP+FVFTSA+ SP LFIRK LLDCGAVQ DA+T+                                                          
Subjt:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------

Query:  ---AWDFIYAQYAMDAGHHHRSIVWQ
           +WDFIYA+Y MDAGHHHRSIVWQ
Subjt:  ---AWDFIYAQYAMDAGHHHRSIVWQ

SwissProt top hitse value%identityAlignment
O23461 L-arabinokinase3.8e-1336.51Show/hide
Query:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------
        H+VHV + AP FVFTS + SP L IRK LLDCGAVQ DA+T+                                                          
Subjt:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------

Query:  ---AWDFIYAQYAMDAGHHHRSIVWQ
           +WDFIYA+Y M AG+HHRSIVWQ
Subjt:  ---AWDFIYAQYAMDAGHHHRSIVWQ

Arabidopsis top hitse value%identityAlignment
AT3G42850.1 Mevalonate/galactokinase family protein2.5e-1535.94Show/hide
Query:  NSHEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI--------------------------------------------------------
        + H VHV S AP+FVFT  + SP LFIRK LLDCG+VQ DA+++                                                        
Subjt:  NSHEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI--------------------------------------------------------

Query:  -----AWDFIYAQYAMDAGHHHRSIVWQ
             +WDFIYA+Y M AGHHHRSIVWQ
Subjt:  -----AWDFIYAQYAMDAGHHHRSIVWQ

AT4G16130.1 arabinose kinase2.7e-1436.51Show/hide
Query:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------
        H+VHV + AP FVFTS + SP L IRK LLDCGAVQ DA+T+                                                          
Subjt:  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI----------------------------------------------------------

Query:  ---AWDFIYAQYAMDAGHHHRSIVWQ
           +WDFIYA+Y M AG+HHRSIVWQ
Subjt:  ---AWDFIYAQYAMDAGHHHRSIVWQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGAGTCAACTAGAGGCGGAGGCGGTTTCAGCGTCGAGGAATAGCCACGAGGTGCACGTGGCCTCCTTTGCCCCTCAGTTTGTTTTTACTTCTGCAATGCTGTCGCC
TGGGTTGTTCATTCGAAAGGAATTGTTGGACTGTGGGGCTGTCCAGACAGATGCAATAACAATCGCTTGGGATTTCATCTATGCACAGTATGCCATGGATGCTGGTCATC
ACCACCGTTCGATAGTTTGGCAGTGCGTGTGGCGGAACAGCTTGTCCATGCGCCGGAGAAATCCAGGTGCTGGAGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGAGTCAACTAGAGGCGGAGGCGGTTTCAGCGTCGAGGAATAGCCACGAGGTGCACGTGGCCTCCTTTGCCCCTCAGTTTGTTTTTACTTCTGCAATGCTGTCGCC
TGGGTTGTTCATTCGAAAGGAATTGTTGGACTGTGGGGCTGTCCAGACAGATGCAATAACAATCGCTTGGGATTTCATCTATGCACAGTATGCCATGGATGCTGGTCATC
ACCACCGTTCGATAGTTTGGCAGTGCGTGTGGCGGAACAGCTTGTCCATGCGCCGGAGAAATCCAGGTGCTGGAGGGTAG
Protein sequenceShow/hide protein sequence
MWSQLEAEAVSASRNSHEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITIAWDFIYAQYAMDAGHHHRSIVWQCVWRNSLSMRRRNPGAGG