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Carg21229 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21229
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosomal protein L22p/L17e family protein isoform 1
Genome locationCarg_Chr18:7732721..7734082
RNA-Seq ExpressionCarg21229
SyntenyCarg21229
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR035204 - NADH-ubiquinone oxidoreductase 11kDa subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648679.1 hypothetical protein Csa_008887 [Cucumis sativus]1.3e-4575.2Show/hide
Query:  LTSTVEEISIPRSILKGFHLRNFRSGLLFRKKLEMKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWD
        L  T EEISIP    +G  L NF      R  LEMKFIMEFAE+LVLR+MEDPKERDR+FRE +YA+KDRCQKTKEMWSYPLRPYGFWTFDRHN+QL WD
Subjt:  LTSTVEEISIPRSILKGFHLRNFRSGLLFRKKLEMKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWD

Query:  AQISQVPGRRDPYDDMLQDIHNNSK
         QISQVPGRRDPYDDMLQD +N+SK
Subjt:  AQISQVPGRRDPYDDMLQDIHNNSK

KAG7012731.1 hypothetical protein SDJN02_25484, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-102100Show/hide
Query:  EFEAGTRPRPTVIGPMGLKYIEHGPLYGPLLNEINGDCTGSAPSSSPFLRVVNCWLTSTVEEISIPRSILKGFHLRNFRSGLLFRKKLEMKFIMEFAENL
        EFEAGTRPRPTVIGPMGLKYIEHGPLYGPLLNEINGDCTGSAPSSSPFLRVVNCWLTSTVEEISIPRSILKGFHLRNFRSGLLFRKKLEMKFIMEFAENL
Subjt:  EFEAGTRPRPTVIGPMGLKYIEHGPLYGPLLNEINGDCTGSAPSSSPFLRVVNCWLTSTVEEISIPRSILKGFHLRNFRSGLLFRKKLEMKFIMEFAENL

Query:  VLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
        VLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
Subjt:  VLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK

XP_022151828.1 uncharacterized protein LOC111019716 [Momordica charantia]4.0e-4290.11Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
        MKF+MEFAENLV+R+MEDPKERDRKFRE LYAVKDRCQKTKEMWSYPLRPYGFWTF+RHN+QL WDAQISQ PGRRDPYDDMLQDI+NNSK
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK

XP_022956462.1 uncharacterized protein LOC111458190 [Cucurbita moschata]2.6e-4189.01Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
        MKFIMEFAENLVLR+MEDPKERDRKFRE +YAVKDRCQKTKEMWSYP+RPYGFWTF+RHN QL WDAQISQVPGRRDPYDD+L DI+NNSK
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK

XP_038891434.1 uncharacterized protein LOC120080854 [Benincasa hispida]2.4e-4291.21Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
        MKF+MEFAENLVLR+MEDPKERDRKFRE LYAVKDRCQKTKEMWSYPLRPYGFWTF+RHN+QL WDAQISQ PGRRDPYDDMLQDI+NNSK
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK

TrEMBL top hitse value%identityAlignment
A0A1S3BE41 uncharacterized protein LOC1034888884.1e-4086.81Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
        MKFIMEFAE+LVLR+MEDPKERDR+FRE +YAVKDRCQKTKEMWS PLRPYGFWTFDRHN+QL WD QISQVPGRRDPYDD+LQD +NNSK
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK

A0A6J1DD92 uncharacterized protein LOC1110197161.9e-4290.11Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
        MKF+MEFAENLV+R+MEDPKERDRKFRE LYAVKDRCQKTKEMWSYPLRPYGFWTF+RHN+QL WDAQISQ PGRRDPYDDMLQDI+NNSK
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK

A0A6J1GWE2 uncharacterized protein LOC1114581901.3e-4189.01Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
        MKFIMEFAENLVLR+MEDPKERDRKFRE +YAVKDRCQKTKEMWSYP+RPYGFWTF+RHN QL WDAQISQVPGRRDPYDD+L DI+NNSK
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK

A0A6J1K907 uncharacterized protein LOC1114933471.3e-4189.01Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
        MKFIMEFAENLVLR+MEDPKERDRKFRE +YAVKDRCQKTKEMWSYP+RPYGFWTF+RHN QL WDAQISQVPGRRDPYDD+L DI+NNSK
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK

A9P8A9 Uncharacterized protein4.1e-4087.91Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
        M FIMEFAENLVLR+MEDPKERDRKFRER+YAVKDRCQKTKEMWSYPLRPYGFWTF+RHNAQL WDAQISQVPGRRDPYDD+LQD + + K
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67350.1 unknown protein1.9e-3474.12Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQD
        M FIMEFAENLVLR+ME+P+ERDRK RE +Y + +RC+K KEMW+ P+RPYGFWTF+RHNAQL WD QISQV GRRDPYDD+L+D
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQD

AT1G67350.2 unknown protein1.9e-3474.12Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQD
        M FIMEFAENLVLR+ME+P+ERDRK RE +Y + +RC+K KEMW+ P+RPYGFWTF+RHNAQL WD QISQV GRRDPYDD+L+D
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAATTTGAGGCCGGCACTAGACCGAGACCGACTGTAATTGGGCCTATGGGCCTTAAGTACATTGAACATGGGCCCTTGTATGGCCCATTGTTAAATGAAATTAATGGGGA
TTGTACGGGTTCTGCTCCTTCTTCGAGTCCATTTCTGCGAGTGGTGAACTGTTGGTTGACGTCTACTGTGGAAGAAATCTCAATTCCTCGATCGATTTTGAAGGGCTTTC
ACTTGAGAAATTTTAGATCTGGTTTGTTGTTTCGGAAGAAATTAGAAATGAAGTTCATCATGGAGTTTGCCGAGAATTTGGTATTAAGAATTATGGAGGATCCAAAAGAG
AGGGATCGCAAATTCCGAGAGCGCCTGTATGCGGTAAAGGACCGATGCCAAAAGACGAAGGAGATGTGGAGCTATCCTCTCCGTCCTTACGGATTTTGGACGTTTGACCG
CCACAATGCTCAGCTGCATTGGGATGCACAAATTAGCCAGGTTCCTGGTAGAAGGGATCCTTATGATGACATGCTTCAGGACATCCACAATAACTCCAAGTGA
mRNA sequenceShow/hide mRNA sequence
GAATTTGAGGCCGGCACTAGACCGAGACCGACTGTAATTGGGCCTATGGGCCTTAAGTACATTGAACATGGGCCCTTGTATGGCCCATTGTTAAATGAAATTAATGGGGA
TTGTACGGGTTCTGCTCCTTCTTCGAGTCCATTTCTGCGAGTGGTGAACTGTTGGTTGACGTCTACTGTGGAAGAAATCTCAATTCCTCGATCGATTTTGAAGGGCTTTC
ACTTGAGAAATTTTAGATCTGGTTTGTTGTTTCGGAAGAAATTAGAAATGAAGTTCATCATGGAGTTTGCCGAGAATTTGGTATTAAGAATTATGGAGGATCCAAAAGAG
AGGGATCGCAAATTCCGAGAGCGCCTGTATGCGGTAAAGGACCGATGCCAAAAGACGAAGGAGATGTGGAGCTATCCTCTCCGTCCTTACGGATTTTGGACGTTTGACCG
CCACAATGCTCAGCTGCATTGGGATGCACAAATTAGCCAGGTTCCTGGTAGAAGGGATCCTTATGATGACATGCTTCAGGACATCCACAATAACTCCAAGTGATTTATGA
AGGTTCTTTTTCTAAGCTTTTTCCTGTCCACTTTGATTTCATTACAGCACTGATTGGAACTTGAAACCTTCATTATTTTTCAGTTAACTTTCATAGTCTTAATTCTTATA
AATGGGAGTGGGTTTGGAGAAAGATGGCTCTTAGATAGACCCCTTTGATTTTGTTCTTGAAATACTATGCAGAATACTCGCAAGAGCTCTGAAATTGCTGGTGGAAACTG
GGAAGCTCTCGAGCAATTGTTTGAACGTATGTTTTTTGTTGTTTTAATTTCACGTTGTGTTGTTGAACACCTTGTGGTTTGTTGTTGTTTAATAAACGTGCTGGTTTGCT
CTTGAGATGATTTTCAAGTTTGTGAGTTTTGAGCTCATTGTTTCTTCTGACAAAGAGTAACGTAAACAGCCTCGATTGATTAGTAAGAACAAATTAAAATAAAGGTTTTT
GTTTAGTTGAGGTTAACTGTATTGTTTGTTCAT
Protein sequenceShow/hide protein sequence
EFEAGTRPRPTVIGPMGLKYIEHGPLYGPLLNEINGDCTGSAPSSSPFLRVVNCWLTSTVEEISIPRSILKGFHLRNFRSGLLFRKKLEMKFIMEFAENLVLRIMEDPKE
RDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK