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Carg21232 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21232
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionELMO domain-containing protein
Genome locationCarg_Chr18:7745036..7749814
RNA-Seq ExpressionCarg21232
SyntenyCarg21232
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573643.1 hypothetical protein SDJN03_27530, partial [Cucurbita argyrosperma subsp. sororia]5.0e-62100Show/hide
Query:  YPDQERQAWYQINGKKLDGSEETHRLILDIFPTSVKKTRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSDERSLEQSPDLLYQVA
        YPDQERQAWYQINGKKLDGSEETHRLILDIFPTSVKKTRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSDERSLEQSPDLLYQVA
Subjt:  YPDQERQAWYQINGKKLDGSEETHRLILDIFPTSVKKTRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSDERSLEQSPDLLYQVA

Query:  IHQFMCTKVRILDVC
        IHQFMCTKVRILDVC
Subjt:  IHQFMCTKVRILDVC
KAG7012734.1 hypothetical protein SDJN02_25487, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-62100Show/hide
Query:  YPDQERQAWYQINGKKLDGSEETHRLILDIFPTSVKKTRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSDERSLEQSPDLLYQVA
        YPDQERQAWYQINGKKLDGSEETHRLILDIFPTSVKKTRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSDERSLEQSPDLLYQVA
Subjt:  YPDQERQAWYQINGKKLDGSEETHRLILDIFPTSVKKTRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSDERSLEQSPDLLYQVA

Query:  IHQFMCTKVRILDVC
        IHQFMCTKVRILDVC
Subjt:  IHQFMCTKVRILDVC
XP_022945164.1 uncharacterized protein LOC111449485 [Cucurbita moschata]6.3e-3393.24Show/hide
Query:  ILDIFPTSVKKTRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSDERSLEQSPDLLYQVA
        + DIFPTSVK+TRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSDER LEQS DLLYQVA
Subjt:  ILDIFPTSVKKTRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSDERSLEQSPDLLYQVA
TrEMBL top hitse value%identityAlignment
A0A287WWX4 ELMO domain-containing protein7.9e-0535.71Show/hide
Query:  YPDQERQA-----WYQINGKKLDGSEETHRL-------------ILDIFPTSVKKTRKKTSCLGIPLCFCWCKYHIYDHANARS
        YPDQE Q      W  +  +  D S +  R              IL +   +  +T +++S LG+P+C CWCKYHI+DHA+A S
Subjt:  YPDQERQA-----WYQINGKKLDGSEETHRL-------------ILDIFPTSVKKTRKKTSCLGIPLCFCWCKYHIYDHANARS
A0A287WWX6 ELMO domain-containing protein5.1e-0450Show/hide
Query:  ILDIFPTSVKKTRKKTSCLGIPLCFCWCKYHIYDHANARS
        IL +   +  +T +++S LG+P+C CWCKYHI+DHA+A S
Subjt:  ILDIFPTSVKKTRKKTSCLGIPLCFCWCKYHIYDHANARS
A0A6J1G077 uncharacterized protein LOC1114494853.1e-3393.24Show/hide
Query:  ILDIFPTSVKKTRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSDERSLEQSPDLLYQVA
        + DIFPTSVK+TRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSDER LEQS DLLYQVA
Subjt:  ILDIFPTSVKKTRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSDERSLEQSPDLLYQVA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATCCTGATCAAGAGCGTCAGGCGTGGTATCAGATCAATGGAAAGAAATTGGATGGCAGTGAAGAAACCCATCGACTGATTTTAGACATCTTTCCAACGTCTGTTAAGAA
AACAAGGAAGAAAACCAGCTGCTTAGGAATACCACTTTGCTTTTGCTGGTGTAAATATCACATTTATGATCATGCAAATGCTCGATCTAGATGGTTCAAACCAAGGACTT
CTATCAGATCAGTGTTCCTTCAGATGTTGTCAGATGAAAGATCATTGGAGCAATCGCCTGACCTTTTGTATCAGGTAGCCATACACCAATTCATGTGCACAAAGGTACGA
ATCCTAGACGTTTGTTAA
mRNA sequenceShow/hide mRNA sequence
TATCCTGATCAAGAGCGTCAGGCGTGGTATCAGATCAATGGAAAGAAATTGGATGGCAGTGAAGAAACCCATCGACTGATTTTAGACATCTTTCCAACGTCTGTTAAGAA
AACAAGGAAGAAAACCAGCTGCTTAGGAATACCACTTTGCTTTTGCTGGTGTAAATATCACATTTATGATCATGCAAATGCTCGATCTAGATGGTTCAAACCAAGGACTT
CTATCAGATCAGTGTTCCTTCAGATGTTGTCAGATGAAAGATCATTGGAGCAATCGCCTGACCTTTTGTATCAGGTAGCCATACACCAATTCATGTGCACAAAGGTACGA
ATCCTAGACGTTTGTTAATATATATAGAGATTTAGAGAAGTCTCCATAACTTGCCCAACCAATTCATGTGCAAAAAGTTCTCCACTATTGATTATTATTATTATTTGCTC
TACAAATTTATTATAATAGTACATATT
Protein sequenceShow/hide protein sequence
YPDQERQAWYQINGKKLDGSEETHRLILDIFPTSVKKTRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSDERSLEQSPDLLYQVAIHQFMCTKVR
ILDVC