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Carg21234 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21234
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMicrosomal signal peptidase
Genome locationCarg_Chr18:7788974..7789866
RNA-Seq ExpressionCarg21234
SyntenyCarg21234
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0006465 - signal peptide processing (biological process)
GO:0045047 - protein targeting to ER (biological process)
GO:0005787 - signal peptidase complex (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR009542 - Signal peptidase complex subunit Spc1/SPCS1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032360.1 putative signal peptidase complex subunit 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-3585.87Show/hide
Query:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTK
        MDWQGQKLAEQMMQIML+AFAV AFS GYVM SFRMM+LVYAGGV+LTTLITVPNWPFFN HPLKWLDP+VAEKYPKPQ  EP  LKKK TK
Subjt:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTK

XP_022944883.1 probable signal peptidase complex subunit 1 [Cucurbita moschata]1.1e-43100Show/hide
Query:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK
        MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK
Subjt:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK

XP_023541979.1 probable signal peptidase complex subunit 1 [Cucurbita pepo subsp. pepo]2.1e-4297.85Show/hide
Query:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK
        MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFR MILVYAGGVILTTLITVPNWPFFNLHPLKWLDP+VAEKYPKPQQPEPAVLKKKSTKK
Subjt:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK

XP_023549840.1 probable signal peptidase complex subunit 1 [Cucurbita pepo subsp. pepo]2.9e-3687.1Show/hide
Query:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK
        MDWQGQKLAEQMMQIML+AFAV AF TGYVM SFRMM+LVYAGGV+LTTLITVPNWPFFN HPLKWLDP+VAEKYPKPQ  EP VLKKK TKK
Subjt:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK

XP_038882954.1 probable signal peptidase complex subunit 1 [Benincasa hispida]2.2e-3684.95Show/hide
Query:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK
        MDWQGQKLAEQ+MQIML+AFAV AF TGY+MGSFRMMILVYAGGV+LTTLITVPNWPFFN HPLKWLDP++AEKYPKPQ  EP VLKKK+ KK
Subjt:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK

TrEMBL top hitse value%identityAlignment
A0A0A0KS09 Uncharacterized protein1.2e-3583.87Show/hide
Query:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK
        MDWQGQKLAEQ+MQ+ML+AFAV AF TGYVMGSFR+MILVYAGGV LTTLITVPNWPFFN HPLKWLDP++AEKYPKPQ  EP VLKKK  KK
Subjt:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK

A0A1S3BET6 probable signal peptidase complex subunit 11.6e-3584.95Show/hide
Query:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK
        MDWQGQKLAEQ+MQIML+AFAV AF TGYVMGSFRMMILVYAGGV LTTLITVPNWPFFN HPLKWLDP++AEKYPKPQ  EP V KKK  KK
Subjt:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK

A0A5D3CZV6 Putative signal peptidase complex subunit 11.6e-3584.95Show/hide
Query:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK
        MDWQGQKLAEQ+MQIML+AFAV AF TGYVMGSFRMMILVYAGGV LTTLITVPNWPFFN HPLKWLDP++AEKYPKPQ  EP V KKK  KK
Subjt:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK

A0A6J1FZA2 probable signal peptidase complex subunit 15.3e-44100Show/hide
Query:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK
        MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK
Subjt:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK

A0A6J1GX63 probable signal peptidase complex subunit 11.2e-3586.02Show/hide
Query:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK
        MDWQGQKLAEQMMQIML+AFAV AF TGYVM SFRMM+LVYAGGV+LTTLITVPNWPFFN HPLKWLDP VAEKYPKPQ  EP  LKKK TKK
Subjt:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK

SwissProt top hitse value%identityAlignment
B0FWK4 Signal peptidase complex subunit 11.8e-0941.77Show/hide
Query:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWL---DPNVAEKYP
        MD++GQKLAEQM Q ++L  A+  F  GYV   F   + +   G   + L+T+P WP +  HPLKWL   D    +K P
Subjt:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWL---DPNVAEKYP

Q3T134 Signal peptidase complex subunit 13.1e-0940.51Show/hide
Query:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWL---DPNVAEKYP
        MD++GQKLAEQM Q ++L  A+  F  GY+   F   + +   G   + L+T+P WP +  HPLKWL   D +  +K P
Subjt:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWL---DPNVAEKYP

Q944J0 Probable signal peptidase complex subunit 15.7e-2765.22Show/hide
Query:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTK
        MDWQGQKL EQ+MQI+L+   V A   GY   SFR M+L+YAGGV+LTTL+TVPNWPF+NLHPLKWLDP+ AEK+PKP+    A  KK S K
Subjt:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTK

Q9D958 Signal peptidase complex subunit 12.4e-0944.78Show/hide
Query:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWL
        MD++GQKLAEQM Q ++L  A+  F  GYV   F   + +   G   + L+T+P WP +  HPLKWL
Subjt:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWL

Q9Y6A9 Signal peptidase complex subunit 19.1e-0938.64Show/hide
Query:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKK
        MD++GQKLAEQM Q ++L  A+  F  GYV   F   + +   G   + L+T+P WP +  HPLKWL   V E     ++P    +K+
Subjt:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKK

Arabidopsis top hitse value%identityAlignment
AT2G22425.1 Microsomal signal peptidase 12 kDa subunit (SPC12)4.0e-2865.22Show/hide
Query:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTK
        MDWQGQKL EQ+MQI+L+   V A   GY   SFR M+L+YAGGV+LTTL+TVPNWPF+NLHPLKWLDP+ AEK+PKP+    A  KK S K
Subjt:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTK

AT2G22425.2 Microsomal signal peptidase 12 kDa subunit (SPC12)4.0e-2865.22Show/hide
Query:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTK
        MDWQGQKL EQ+MQI+L+   V A   GY   SFR M+L+YAGGV+LTTL+TVPNWPF+NLHPLKWLDP+ AEK+PKP+    A  KK S K
Subjt:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTK

AT4G40042.1 Microsomal signal peptidase 12 kDa subunit (SPC12)2.8e-2967.74Show/hide
Query:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK
        MDWQGQKLAEQ+MQI+LL  AV +F  GY   SFRMM+L+YAGGV+LTTLIT+PNWP FN H LKWLDP+ AEK+PKPQ    +  KK S+KK
Subjt:  MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGGCAAGGGCAGAAGCTTGCGGAGCAGATGATGCAGATTATGTTGCTTGCATTTGCCGTGGGGGCCTTTTCGACTGGCTATGTTATGGGATCGTTTCGGATGAT
GATCTTGGTTTACGCCGGCGGTGTGATTCTCACCACATTGATTACTGTTCCGAATTGGCCTTTCTTTAATCTCCACCCGCTCAAATGGTTGGATCCTAATGTGGCTGAAA
AATACCCTAAGCCGCAGCAGCCGGAGCCTGCGGTTTTGAAGAAGAAATCCACTAAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
TTGACGTATTTCTTCCGCTCATTTCCTCCGGCGGATCATTACCCTTTGAACTGCACATCGTCGTCTCCAAATTCGCCTACAGATGGATTGGCAAGGGCAGAAGCTTGCGG
AGCAGATGATGCAGATTATGTTGCTTGCATTTGCCGTGGGGGCCTTTTCGACTGGCTATGTTATGGGATCGTTTCGGATGATGATCTTGGTTTACGCCGGCGGTGTGATT
CTCACCACATTGATTACTGTTCCGAATTGGCCTTTCTTTAATCTCCACCCGCTCAAATGGTTGGATCCTAATGTGGCTGAAAAATACCCTAAGCCGCAGCAGCCGGAGCC
TGCGGTTTTGAAGAAGAAATCCACTAAGAAGTAGGTCTGTTTGATTTGACTTTGTTCTCGTATTAACACAGTTTGAACCGTTGGATTACTAATTTCCCCACAATCATGAT
ACATACACTGTTTTTATGGATTATAATTTTGAAGTTTTAGAGAAAGACATGTCTCTTTTTTGGTTTTCGCTATTGATTTTCAGTTGATTGTTAAAATAGATTAAATCATC
ATAATTTTAAGTTAATTGTCTGCTTTTCTTCCCTGGTTGTTAAGGATTTGTGGTTGTTATCATATGAATGTGAAGAGCACTTTGAAACT
Protein sequenceShow/hide protein sequence
MDWQGQKLAEQMMQIMLLAFAVGAFSTGYVMGSFRMMILVYAGGVILTTLITVPNWPFFNLHPLKWLDPNVAEKYPKPQQPEPAVLKKKSTKK