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Carg21241 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21241
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr18:7832628..7836476
RNA-Seq ExpressionCarg21241
SyntenyCarg21241
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012743.1 hypothetical protein SDJN02_25496 [Cucurbita argyrosperma subsp. argyrosperma]3.3e-132100Show/hide
Query:  MAGAEPSLEKEVVGRKRNGRDGRAASTLLFRPYMALTPALRLACATQQSKPLQLSRNCAGKVGYFMYQHVKMFIYSIAREGSCWISRRRGSSSVDCSIIF
        MAGAEPSLEKEVVGRKRNGRDGRAASTLLFRPYMALTPALRLACATQQSKPLQLSRNCAGKVGYFMYQHVKMFIYSIAREGSCWISRRRGSSSVDCSIIF
Subjt:  MAGAEPSLEKEVVGRKRNGRDGRAASTLLFRPYMALTPALRLACATQQSKPLQLSRNCAGKVGYFMYQHVKMFIYSIAREGSCWISRRRGSSSVDCSIIF

Query:  ICTGDGVQVVAQLPSAGPVPPPTSVLTARYRFVYHLRAYVVHMTIYSSCSNQQAFSSYNLSIKLITLKPKESLEQKQLKNQAKWRDFYPNDHIRTNSIHD
        ICTGDGVQVVAQLPSAGPVPPPTSVLTARYRFVYHLRAYVVHMTIYSSCSNQQAFSSYNLSIKLITLKPKESLEQKQLKNQAKWRDFYPNDHIRTNSIHD
Subjt:  ICTGDGVQVVAQLPSAGPVPPPTSVLTARYRFVYHLRAYVVHMTIYSSCSNQQAFSSYNLSIKLITLKPKESLEQKQLKNQAKWRDFYPNDHIRTNSIHD

Query:  IRIARFSNGNNEAIFDTNICLENSSIINDHCIGYYSIKR
        IRIARFSNGNNEAIFDTNICLENSSIINDHCIGYYSIKR
Subjt:  IRIARFSNGNNEAIFDTNICLENSSIINDHCIGYYSIKR
TrEMBL top hitse value%identityAlignment
A0A2P2PBP5 Uncharacterized protein1.9e-0841.41Show/hide
Query:  VHMTIYSSCSNQQAFSSYNLSIKLITLKPKESLEQKQLKNQAKWRDFYPNDHIRTNSIHDIRIARFSNGNNEAIFDTNICLENSSIINDHCIGYYSIKR
        +HMT+Y +CS   +FS  NLS+                           NDHI  + IHD+ I+ F+NGNN   F+TNICL NSS++ DH I Y SIKR
Subjt:  VHMTIYSSCSNQQAFSSYNLSIKLITLKPKESLEQKQLKNQAKWRDFYPNDHIRTNSIHDIRIARFSNGNNEAIFDTNICLENSSIINDHCIGYYSIKR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGAGCTGAACCAAGTCTAGAAAAGGAAGTAGTTGGTCGAAAGCGGAACGGTCGAGACGGGCGGGCAGCTTCAACTCTCTTGTTTAGACCATACATGGCCTTAAC
TCCCGCGTTAAGACTCGCCTGTGCCACACAACAAAGTAAACCACTTCAGCTAAGTCGAAACTGCGCTGGGAAAGTCGGATATTTTATGTACCAGCATGTCAAGATGTTCA
TCTATAGTATTGCTCGTGAAGGGTCGTGTTGGATTAGTCGACGACGGGGAAGTTCATCAGTGGATTGCAGCATCATCTTCATCTGCACTGGGGATGGTGTGCAAGTAGTA
GCACAACTTCCTTCAGCAGGCCCGGTTCCACCTCCGACCAGTGTCCTCACCGCTCGATATCGCTTCGTGTACCATTTGAGGGCATATGTAGTGCACATGACAATCTATAG
CTCCTGCAGTAACCAGCAAGCCTTCTCCAGCTATAACCTCAGTATTAAGCTGATAACATTGAAACCAAAGGAATCATTAGAACAAAAGCAGCTAAAAAATCAAGCTAAGT
GGAGAGATTTTTACCCCAATGATCATATTAGGACAAACTCCATCCATGACATCAGGATTGCCAGATTTTCCAATGGAAATAATGAAGCCATCTTTGATACCAATATCTGC
CTTGAAAATTCCAGTATAATCAATGATCACTGCATTGGTTATTACAGTATCAAGAGATGA
mRNA sequenceShow/hide mRNA sequence
TTCATTTATTTTTAAACAAAGGCATTCCTCCCTATCACATAACTGATATCTTCGCTTATTATGTTTGGTCTCAATATCAAACATAGATACGAACTAACAGACACCGAAAA
GTTGAGGGTAAGCCAATGGCAGGAGCTGAACCAAGTCTAGAAAAGGAAGTAGTTGGTCGAAAGCGGAACGGTCGAGACGGGCGGGCAGCTTCAACTCTCTTGTTTAGACC
ATACATGGCCTTAACTCCCGCGTTAAGACTCGCCTGTGCCACACAACAAAGTAAACCACTTCAGCTAAGTCGAAACTGCGCTGGGAAAGTCGGATATTTTATGTACCAGC
ATGTCAAGATGTTCATCTATAGTATTGCTCGTGAAGGGTCGTGTTGGATTAGTCGACGACGGGGAAGTTCATCAGTGGATTGCAGCATCATCTTCATCTGCACTGGGGAT
GGTGTGCAAGTAGTAGCACAACTTCCTTCAGCAGGCCCGGTTCCACCTCCGACCAGTGTCCTCACCGCTCGATATCGCTTCGTGTACCATTTGAGGGCATATGTAGTGCA
CATGACAATCTATAGCTCCTGCAGTAACCAGCAAGCCTTCTCCAGCTATAACCTCAGTATTAAGCTGATAACATTGAAACCAAAGGAATCATTAGAACAAAAGCAGCTAA
AAAATCAAGCTAAGTGGAGAGATTTTTACCCCAATGATCATATTAGGACAAACTCCATCCATGACATCAGGATTGCCAGATTTTCCAATGGAAATAATGAAGCCATCTTT
GATACCAATATCTGCCTTGAAAATTCCAGTATAATCAATGATCACTGCATTGGTTATTACAGTATCAAGAGATGA
Protein sequenceShow/hide protein sequence
MAGAEPSLEKEVVGRKRNGRDGRAASTLLFRPYMALTPALRLACATQQSKPLQLSRNCAGKVGYFMYQHVKMFIYSIAREGSCWISRRRGSSSVDCSIIFICTGDGVQVV
AQLPSAGPVPPPTSVLTARYRFVYHLRAYVVHMTIYSSCSNQQAFSSYNLSIKLITLKPKESLEQKQLKNQAKWRDFYPNDHIRTNSIHDIRIARFSNGNNEAIFDTNIC
LENSSIINDHCIGYYSIKR